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py-macs2: New package (#2011)

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* py-macs2: New package

* py-macs2: add py-numpy@1.6: dependency
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John Finigan 2016-10-14 13:00:56 -06:00 committed by Todd Gamblin
parent e359a7ca59
commit 4be224238e
1 changed files with 46 additions and 0 deletions
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##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class PyMacs2(Package):
"""MACS2 Model-based Analysis of ChIP-Seq"""
homepage = "https://github.com/taoliu/MACS"
url = "https://pypi.python.org/packages/9f/99/a8ac96b357f6b0a6f559fe0f5a81bcae12b98579551620ce07c5183aee2c/MACS2-2.1.1.20160309.tar.gz"
version('2.1.1.20160309', '2008ba838f83f34f8e0fddefe2a3a0159f4a740707c68058f815b31ddad53d26')
extends('python')
depends_on('python@2.7:2.8')
# Most Python packages only require py-setuptools as a build dependency.
# However, py-macs2 requires py-setuptools during runtime as well.
depends_on('py-setuptools', type=nolink)
depends_on('py-numpy@1.6:', type=nolink)
def install(self, spec, prefix):
setup_py('install', '--prefix={0}'.format(prefix))