update e4s to reflect june status (#31032)
This commit is contained in:
eugeneswalker
GitHub
parent
64b41b012c
commit
3cb6fd140c
2 changed files with 192 additions and 184 deletions
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@ -264,9 +264,11 @@ e4s-mac-protected-build:
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e4s-pr-generate:
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extends: [ ".e4s", ".pr-generate"]
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image: ecpe4s/ubuntu22.04-runner-x86_64:2022-07-01
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e4s-protected-generate:
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extends: [ ".e4s", ".protected-generate"]
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image: ecpe4s/ubuntu22.04-runner-x86_64:2022-07-01
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e4s-pr-build:
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extends: [ ".e4s", ".pr-build" ]
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@ -15,23 +15,16 @@ spack:
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packages:
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all:
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compiler:
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- gcc@7.5.0
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compiler: [gcc@11.2.0]
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providers:
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blas:
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- openblas
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mpi:
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- mpich
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target:
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- x86_64
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blas: [openblas]
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mpi: [mpich]
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target: [x86_64]
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variants: +mpi
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binutils:
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variants: +ld +gold +headers +libiberty ~nls
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version:
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- 2.36.1
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doxygen:
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version:
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- 1.8.20
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cuda:
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version: [11.7.0]
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elfutils:
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variants: +bzip2 ~nls +xz
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hdf5:
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@ -40,73 +33,29 @@ spack:
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variants: fabrics=sockets,tcp,udp,rxm
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libunwind:
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variants: +pic +xz
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mesa:
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variants: ~llvm
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mesa18:
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variants: ~llvm
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mpich:
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variants: ~wrapperrpath
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ncurses:
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variants: +termlib
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openblas:
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variants: threads=openmp
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openturns:
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version: [1.18]
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python:
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version: [3.8.13]
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trilinos:
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variants: +amesos +amesos2 +anasazi +aztec +belos +boost +epetra +epetraext +ifpack +ifpack2 +intrepid +intrepid2 +isorropia +kokkos +ml +minitensor +muelu +nox +piro +phalanx +rol +rythmos +sacado +stk +shards +shylu +stokhos +stratimikos +teko +tempus +tpetra +trilinoscouplings +zoltan +zoltan2 +superlu-dist gotype=long_long
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variants: +amesos +amesos2 +anasazi +aztec +belos +boost +epetra +epetraext
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+ifpack +ifpack2 +intrepid +intrepid2 +isorropia +kokkos +ml +minitensor +muelu
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+nox +piro +phalanx +rol +rythmos +sacado +stk +shards +shylu +stokhos +stratimikos
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+teko +tempus +tpetra +trilinoscouplings +zoltan +zoltan2 +superlu-dist gotype=long_long
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xz:
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variants: +pic
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mesa:
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version: [21.3.8]
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definitions:
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- cuda_specs:
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- amrex +cuda cuda_arch=70
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- caliper +cuda cuda_arch=70
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- chai ~benchmarks ~tests +cuda cuda_arch=70 ^umpire ~shared
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- ginkgo +cuda cuda_arch=70
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- heffte +cuda cuda_arch=70
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- hpx +cuda cuda_arch=70
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- hypre +cuda cuda_arch=70
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- kokkos +wrapper +cuda cuda_arch=70
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- kokkos-kernels +cuda cuda_arch=70 ^kokkos +wrapper +cuda cuda_arch=70
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- magma +cuda cuda_arch=70
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- mfem +cuda cuda_arch=70
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- parsec +cuda cuda_arch=70
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- petsc +cuda cuda_arch=70
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- raja +cuda cuda_arch=70
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- slate +cuda cuda_arch=70
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- slepc +cuda cuda_arch=70
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- strumpack ~slate +cuda cuda_arch=70
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- sundials +cuda cuda_arch=70
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- superlu-dist +cuda cuda_arch=70
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- tasmanian +cuda cuda_arch=70
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# Trilinos: enable CUDA, Kokkos, and important Tpetra-era solver packages;
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# disable Epetra; disable ETI to speed up CI; disable all other TPLs
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- trilinos@13.2.0 +cuda cuda_arch=70 +wrapper +amesos2 +belos +ifpack2 +kokkos +muelu +nox +stratimikos +tpetra ~amesos ~anasazi ~aztec ~epetraext ~ifpack ~isorropia ~ml ~teko ~tempus ~zoltan ~zoltan2 ~explicit_template_instantiation ~adios2~basker~boost~chaco~complex~debug~dtk~epetraextbtf~epetraextexperimental~epetraextgraphreorderings~exodus~float~fortran~gtest~hypre~intrepid~intrepid2~ipo~mesquite~minitensor~mumps~openmp~phalanx~piro~rocm~rol~rythmos~sacado~scorec~shards~shared~shylu~stk~stokhos~strumpack~suite-sparse~superlu~superlu-dist~trilinoscouplings~x11
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- umpire ~shared +cuda cuda_arch=70
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- vtk-m +cuda cuda_arch=70
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- zfp +cuda cuda_arch=70
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#- ascent ~shared +cuda cuda_arch=70
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#- axom +cuda cuda_arch=70 ^umpire ~shared
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#- dealii +cuda cuda_arch=70 # gmsh
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#- flecsi +cuda cuda_arch=70
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#- paraview +cuda cuda_arch=70
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- rocm_specs:
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- kokkos +rocm amdgpu_target=gfx906
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#- amrex +rocm amdgpu_target=gfx906
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#- chai +rocm ~benchmarks amdgpu_target=gfx906
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#- ginkgo +rocm amdgpu_target=gfx906 # needs hip<4.1
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#- raja +rocm ~openmp amdgpu_target=gfx906 # blt 0.3.6 issue with rocm
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#- slate +rocm amdgpu_target=gfx906
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#- strumpack +rocm ~slate amdgpu_target=gfx906
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#- sundials +rocm amdgpu_target=gfx906
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#- tasmanian +rocm amdgpu_target=gfx906
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#- umpire+rocm amdgpu_target=gfx906 # blt 0.3.6 issue with rocm
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- default_specs:
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specs:
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# CPU
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- adios
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- adios2
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- alquimia
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- aml
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- amrex
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- arborx
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@ -115,16 +64,18 @@ spack:
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- ascent
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- axom
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- bolt
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- bricks
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- butterflypack
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- cabana
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- caliper
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- chai ~benchmarks ~tests
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- conduit
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- darshan-runtime
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- darshan-util
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- datatransferkit
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- dyninst
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- exaworks
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- faodel
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- flecsi@1.4.2 +external_cinch
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- flecsi
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- flit
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- flux-core
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- fortrilinos
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@ -132,13 +83,11 @@ spack:
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- ginkgo
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- globalarrays
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- gmp
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- gotcha
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- gptune
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- h5bench
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- hdf5
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- hdf5 +fortran +hl +shared
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- heffte +fftw
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- hpctoolkit
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- hpx
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- hpx networking=mpi
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- hypre
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- kokkos +openmp
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- kokkos-kernels +openmp
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@ -147,8 +96,6 @@ spack:
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- libnrm
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- libquo
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- libunwind
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- llvm targets=amdgpu,nvptx +clang +compiler-rt +libcxx +lld +lldb +llvm_dylib +flang ~cuda
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- loki
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- mercury
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- metall
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- mfem
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@ -156,21 +103,24 @@ spack:
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- mpifileutils ~xattr
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- nccmp
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- nco
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- ninja
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- netlib-scalapack
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- nrm
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- nvhpc
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- omega-h
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- openmpi
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- openpmd-api
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- papi
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- papyrus@1.0.1
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- papyrus
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- parallel-netcdf
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- parsec ~cuda
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- pdt
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- petsc
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- phist
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- plasma
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- plumed
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- precice
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- pumi
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- py-cinemasci
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- py-jupyterhub
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- py-libensemble
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- py-petsc4py
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@ -179,7 +129,6 @@ spack:
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- py-warpx ^warpx dims=rz
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- qthreads scheduler=distrib
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- raja
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- rempi
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- scr
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- slate ~cuda
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- slepc
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@ -193,34 +142,87 @@ spack:
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- sz
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- tasmanian
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- tau +mpi +python
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- trilinos +amesos +amesos2 +anasazi +aztec +belos +boost +epetra +epetraext +ifpack +ifpack2 +intrepid +intrepid2 +isorropia +kokkos +ml +minitensor +muelu +nox +piro +phalanx +rol +rythmos +sacado +stk +shards +shylu +stokhos +stratimikos +teko +tempus +tpetra +trilinoscouplings +zoltan +zoltan2 +superlu-dist gotype=long_long
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- trilinos@13.0.1 +amesos +amesos2 +anasazi +aztec +belos +boost +epetra +epetraext +ifpack
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+ifpack2 +intrepid +intrepid2 +isorropia +kokkos +ml +minitensor +muelu +nox +piro
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+phalanx +rol +rythmos +sacado +stk +shards +shylu +stokhos +stratimikos +teko
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+tempus +tpetra +trilinoscouplings +zoltan +zoltan2 +superlu-dist gotype=long_long
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- turbine
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- umap
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- umpire
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- unifyfs@0.9.1
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- upcxx
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- variorum
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- veloc
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- vtk-m
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- wannier90
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- zfp
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#- dealii
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#- geopm
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#- qt
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#- qwt
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- arch:
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- '%gcc target=x86_64'
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# CUDA
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- adios2 +cuda cuda_arch=80
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- arborx +cuda cuda_arch=80 ^kokkos@3.6.00 +wrapper
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- bricks +cuda
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- cabana +cuda ^kokkos@3.6.00 +wrapper +cuda_lambda +cuda cuda_arch=80
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- chai ~benchmarks ~tests +cuda cuda_arch=80 ^umpire@6.0.0 ~shared
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- flux-core +cuda
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- ginkgo +cuda cuda_arch=80
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- heffte +cuda cuda_arch=80
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- hpctoolkit +cuda
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- hpx +cuda cuda_arch=80
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- hypre +cuda cuda_arch=80
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- kokkos-kernels +cuda cuda_arch=80 ^kokkos +wrapper +cuda cuda_arch=80
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- kokkos +wrapper +cuda cuda_arch=80
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- magma +cuda cuda_arch=80
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- mfem +cuda cuda_arch=80
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- papi +cuda
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- petsc +cuda cuda_arch=80
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- raja +cuda cuda_arch=80
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- slate +cuda cuda_arch=80
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- slepc +cuda cuda_arch=80
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- strumpack ~slate +cuda cuda_arch=80
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- sundials +cuda cuda_arch=80
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- superlu-dist +cuda cuda_arch=80
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- tasmanian +cuda cuda_arch=80
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- tau +mpi +cuda
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- umpire ~shared +cuda cuda_arch=80
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- vtk-m +cuda cuda_arch=80
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- zfp +cuda cuda_arch=80
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# ROCm
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- amrex +rocm amdgpu_target=gfx90a
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- arborx +rocm amdgpu_target=gfx90a
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- gasnet +rocm amdgpu_target=gfx90a
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- heffte +rocm amdgpu_target=gfx90a
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- hpx +rocm amdgpu_target=gfx90a
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- kokkos +rocm amdgpu_target=gfx90a
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- magma ~cuda +rocm amdgpu_target=gfx90a
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- petsc +rocm amdgpu_target=gfx90a
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- slepc +rocm amdgpu_target=gfx90a ^petsc +rocm amdgpu_target=gfx90a
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- strumpack ~slate +rocm amdgpu_target=gfx90a
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- superlu-dist +rocm amdgpu_target=gfx90a
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- tau +mpi +rocm
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- upcxx +rocm amdgpu_target=gfx90a
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specs:
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# CPU failures
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#- caliper # /usr/bin/ld: ../../libcaliper.so.2.7.0: undefined reference to `_dl_sym'
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#- charliecloud # autogen.sh: 6: [[: not found
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#- geopm # /usr/include/x86_64-linux-gnu/bits/string_fortified.h:95:10: error:'__builtin_strncpy' specified bound 512 equals destination size [-Werror=stringop-truncation]
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#- gotcha # /usr/bin/ld: ../../libgotcha.so.2.0.2: undefined reference to `_dl_sym'
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#- h5bench # commons/h5bench_util.h:196: multiple definition of `has_vol_async';
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#- loki # ../include/loki/Singleton.h:158:14: warning: 'template<class> class std::auto_ptr' is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
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#- paraview +qt # llvm@14
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#- pruners-ninja # test/ninja_test_util.c:34: multiple definition of `a';
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#- rempi # rempi_message_manager.h:53:3: error: 'string' does not name a type
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#- unifyfs # gotcha: /usr/bin/ld: ../../libgotcha.so.2.0.2: undefined reference to `_dl_sym'
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#- variorum # /usr/bin/ld: Intel/CMakeFiles/variorum_intel.dir/Broadwell_4F.c.o:(.bss+0x0): multiple definition of `g_platform';
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- matrix:
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- - $default_specs
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- - $arch
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# CUDA failures
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#- caliper +cuda cuda_arch=80 # /usr/bin/ld: ../../libcaliper.so.2.7.0: undefined reference to `_dl_sym'
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#- parsec +cuda cuda_arch=80 # parsec/mca/device/cuda/transfer.c:168: multiple definition of `parsec_CUDA_d2h_max_flows';
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#- trilinos@13.2.0 +cuda cuda_arch=80 # /usr/include/c++/11/bits/std_function.h:435:145: error: parameter packs not expanded with '...':
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- matrix:
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- - $cuda_specs
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- - $arch
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# ROCm failures
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#- chai ~benchmarks +rocm amdgpu_target=gfx90a # umpire: Target "blt_hip" INTERFACE_INCLUDE_DIRECTORIES property contains path: "/tmp/root/spack-stage/spack-stage-umpire-2022.03.1-by6rldnpdowaaoqgxkeqejwyx5uxo2sv/spack-src/HIP_CLANG_INCLUDE_PATH-NOTFOUND/.." which is prefixed in the source directory.
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#- hpctoolkit +rocm # roctracer-dev: core/memory_pool.h:155:64: error: 'int pthread_yield()' is deprecated: pthread_yield is deprecated, use sched_yield instead [-Werror=deprecated-declarations]
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#- raja ~openmp +rocm amdgpu_target=gfx90a # cmake: Could NOT find ROCPRIM (missing: ROCPRIM_INCLUDE_DIRS)
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#- umpire +rocm amdgpu_target=gfx90a # Target "blt_hip" INTERFACE_INCLUDE_DIRECTORIES property contains path: "/tmp/root/spack-stage/spack-stage-umpire-2022.03.1-by6rldnpdowaaoqgxkeqejwyx5uxo2sv/spack-src/HIP_CLANG_INCLUDE_PATH-NOTFOUND/.." which is prefixed in the source directory.
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mirrors: { "mirror": "s3://spack-binaries/develop/e4s" }
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@ -237,10 +239,14 @@ spack:
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- if [[ -r /mnt/key/spack_public_key.gpg ]]; then spack gpg trust /mnt/key/spack_public_key.gpg; fi
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- spack -d ci rebuild > >(tee ${SPACK_ARTIFACTS_ROOT}/user_data/pipeline_out.txt) 2> >(tee ${SPACK_ARTIFACTS_ROOT}/user_data/pipeline_err.txt >&2)
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image: { "name": "ghcr.io/spack/e4s-ubuntu-18.04:v2021-10-18", "entrypoint": [""] }
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image: ecpe4s/ubuntu22.04-runner-x86_64:2022-07-01
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mappings:
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- match:
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- hipblas
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- llvm
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- llvm-amdgpu
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- rocblas
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runner-attributes:
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tags: [ "spack", "huge", "x86_64" ]
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variables:
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@ -402,7 +408,7 @@ spack:
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KUBERNETES_CPU_REQUEST: "500m"
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KUBERNETES_MEMORY_REQUEST: "500M"
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- match: ['os=ubuntu18.04']
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- match: ['os=ubuntu22.04']
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runner-attributes:
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tags: ["spack", "x86_64"]
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variables:
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@ -414,7 +420,7 @@ spack:
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before_script:
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- . "./share/spack/setup-env.sh"
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- spack --version
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image: { "name": "ghcr.io/spack/e4s-ubuntu-18.04:v2021-10-18", "entrypoint": [""] }
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image: ecpe4s/ubuntu22.04-runner-x86_64:2022-07-01
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tags: ["spack", "public", "x86_64"]
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signing-job-attributes:
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