diff --git a/var/spack/repos/builtin/packages/hdf5/package.py b/var/spack/repos/builtin/packages/hdf5/package.py index 6ed37d1f70..2877d33133 100644 --- a/var/spack/repos/builtin/packages/hdf5/package.py +++ b/var/spack/repos/builtin/packages/hdf5/package.py @@ -324,6 +324,15 @@ def patch_postdeps(self): arg for arg in m.group(1).split(' ') if arg != '-l'), 'libtool') + @run_after('configure') + def patch_libtool(self): + """AOCC support for HDF5""" + if '%aocc' in self.spec: + filter_file( + r'\$wl-soname \$wl\$soname', + r'-fuse-ld=ld -Wl,-soname,\$soname', + 'libtool', string=True) + @run_after('install') @on_package_attributes(run_tests=True) def check_install(self): diff --git a/var/spack/repos/builtin/packages/netcdf-fortran/package.py b/var/spack/repos/builtin/packages/netcdf-fortran/package.py index 7f119b4925..3552101abf 100644 --- a/var/spack/repos/builtin/packages/netcdf-fortran/package.py +++ b/var/spack/repos/builtin/packages/netcdf-fortran/package.py @@ -136,6 +136,15 @@ def configure_args(self): return config_args + @run_after('configure') + def patch_libtool(self): + """AOCC support for NETCDF-F""" + if '%aocc' in self.spec: + filter_file( + r'\${wl}-soname \$wl\$soname', + r'-fuse-ld=ld -Wl,-soname,\$soname', + 'libtool', string=True) + @when('@:4.4.5') def check(self): with working_dir(self.build_directory): diff --git a/var/spack/repos/builtin/packages/wrf/package.py b/var/spack/repos/builtin/packages/wrf/package.py index d638192297..196c5efc97 100644 --- a/var/spack/repos/builtin/packages/wrf/package.py +++ b/var/spack/repos/builtin/packages/wrf/package.py @@ -105,6 +105,7 @@ class Wrf(Package): patch("patches/3.9/netcdf_backport.patch", when="@3.9.1.1") patch("patches/3.9/tirpc_detect.patch", when="@3.9.1.1") patch("patches/3.9/add_aarch64.patch", when="@3.9.1.1") + patch("patches/3.9/configure_aocc.patch", when="@3.9.1.1 %aocc@:3.0") # These patches deal with netcdf & netcdf-fortran being two diff things # Patches are based on: @@ -144,6 +145,7 @@ class Wrf(Package): depends_on("libpng") depends_on("zlib") depends_on("perl") + depends_on("jemalloc", when="%aocc") # not sure if +fortran is required, but seems like a good idea depends_on("hdf5+fortran+hl+mpi") # build script use csh @@ -170,6 +172,11 @@ def setup_build_environment(self, env): env.set("FCFLAGS", args) env.set("FFLAGS", args) + if self.spec.satisfies("%aocc"): + env.set("WRFIO_NCD_LARGE_FILE_SUPPORT", 1) + env.set("HDF5", self.spec["hdf5"].prefix) + env.prepend_path('PATH', ancestor(self.compiler.cc)) + def patch(self): # Let's not assume csh is intalled in bin files = glob.glob("*.csh") @@ -232,12 +239,31 @@ def do_configure_fixup(self): ) ofh.write(line) + if self.spec.satisfies("@3.9.1.1 %aocc"): + rename( + "./arch/configure_new.defaults", + "./arch/configure_new.defaults.bak", + ) + with open("./arch/configure_new.defaults.bak", "rt") as ifh: + with open("./arch/configure_new.defaults", "wt") as ofh: + for line in ifh: + if line.startswith("DM_"): + line = line.replace( + "mpif90 -DMPI2_SUPPORT", + self.spec['mpi'].mpifc + " -DMPI2_SUPPORT" + ) + line = line.replace( + "mpicc -DMPI2_SUPPORT", + self.spec['mpi'].mpicc + " -DMPI2_SUPPORT" + ) + ofh.write(line) + def configure(self, spec, prefix): # Remove broken default options... self.do_configure_fixup() - if self.spec.compiler.name not in ["intel", "gcc"]: + if self.spec.compiler.name not in ["intel", "gcc", "aocc"]: raise InstallError( "Compiler %s not currently supported for WRF build." % self.spec.compiler.name @@ -284,6 +310,12 @@ def configure(self, spec, prefix): if returncode != 0: raise InstallError("Configure failed - unknown error") + @run_after("configure") + def patch_for_libmvec(self): + if self.spec.satisfies("@3.9.1.1 %aocc@:3.0"): + fp = self.package_dir + "/patches/3.9/aocc_lmvec.patch" + which('patch')('-s', '-p1', '-i', '{0}'.format(fp), '-d', '.') + def run_compile_script(self): csh_bin = self.spec["tcsh"].prefix.bin.csh csh = Executable(csh_bin) diff --git a/var/spack/repos/builtin/packages/wrf/patches/3.9/aocc_lmvec.patch b/var/spack/repos/builtin/packages/wrf/patches/3.9/aocc_lmvec.patch new file mode 100644 index 0000000000..6d67b04612 --- /dev/null +++ b/var/spack/repos/builtin/packages/wrf/patches/3.9/aocc_lmvec.patch @@ -0,0 +1,130 @@ +diff --git a/configure.wrf b/configure_libm.wrf +index b0e306c..41a6cba 100644 +--- a/configure.wrf ++++ b/configure_libm.wrf +@@ -263,56 +263,56 @@ wrfio_nf : + ( cd $(WRF_SRC_ROOT_DIR)/external/io_netcdf ; \ + make $(J) NETCDFPATH="$(NETCDFPATH)" NETCDFFPATH="$(NETCDFFPATH)" RANLIB="$(RANLIB)" CPP="$(CPP)" \ + CC="$(SCC)" CFLAGS="$(CFLAGS)" \ +- FC="$(SFC) $(PROMOTION) $(OMP) $(FCFLAGS)" TRADFLAG="$(TRADFLAG)" AR="$(AR)" ARFLAGS="$(ARFLAGS)" ) ++ FC="$(SFC) $(PROMOTION) $(OMP) $(LIBMVEC) $(FCFLAGS)" TRADFLAG="$(TRADFLAG)" AR="$(AR)" ARFLAGS="$(ARFLAGS)" ) + + wrfio_pnf : + ( cd $(WRF_SRC_ROOT_DIR)/external/io_pnetcdf ; \ + make $(J) NETCDFPATH="$(PNETCDFPATH)" RANLIB="$(RANLIB)" CPP="$(CPP) $(ARCHFLAGS)" \ +- FC="$(FC) $(PROMOTION) $(OMP) $(FCFLAGS)" TRADFLAG="$(TRADFLAG)" AR="$(AR)" ARFLAGS="$(ARFLAGS)" ) ++ FC="$(FC) $(PROMOTION) $(OMP) $(LIBMVEC) $(FCFLAGS)" TRADFLAG="$(TRADFLAG)" AR="$(AR)" ARFLAGS="$(ARFLAGS)" ) + + wrfio_grib_share : + ( cd $(WRF_SRC_ROOT_DIR)/external/io_grib_share ; \ + make $(J) CC="$(SCC)" CFLAGS="$(CFLAGS)" RM="$(RM)" RANLIB="$(RANLIB)" CPP="$(CPP)" \ +- FC="$(SFC) $(PROMOTION) -I. $(FCDEBUG) $(FCBASEOPTS) $(FCSUFFIX)" TRADFLAG="$(TRADFLAG)" AR="$(AR)" ARFLAGS="$(ARFLAGS)" archive) ++ FC="$(SFC) $(PROMOTION) -I. $(LIBMVEC) $(FCDEBUG) $(FCBASEOPTS) $(FCSUFFIX)" TRADFLAG="$(TRADFLAG)" AR="$(AR)" ARFLAGS="$(ARFLAGS)" archive) + + wrfio_grib1 : + ( cd $(WRF_SRC_ROOT_DIR)/external/io_grib1 ; \ + make $(J) CC="$(SCC)" CFLAGS="$(CFLAGS)" RM="$(RM)" RANLIB="$(RANLIB)" CPP="$(CPP)" \ +- FC="$(SFC) $(PROMOTION) -I. $(FCDEBUG) $(FCBASEOPTS) $(FCSUFFIX)" TRADFLAG="$(TRADFLAG)" AR="$(AR)" ARFLAGS="$(ARFLAGS)" archive) ++ FC="$(SFC) $(PROMOTION) -I. $(LIBMVEC) $(FCDEBUG) $(FCBASEOPTS) $(FCSUFFIX)" TRADFLAG="$(TRADFLAG)" AR="$(AR)" ARFLAGS="$(ARFLAGS)" archive) + + wrfio_grib2 : + ( cd $(WRF_SRC_ROOT_DIR)/external/io_grib2 ; \ + make $(J) CC="$(SCC)" CFLAGS="$(CFLAGS) " RM="$(RM)" RANLIB="$(RANLIB)" \ + CPP="$(CPP)" \ +- FC="$(SFC) $(PROMOTION) -I. $(FCDEBUG) $(FCBASEOPTS) $(FCSUFFIX)" TRADFLAG="-traditional" AR="$(AR)" ARFLAGS="$(ARFLAGS)" \ ++ FC="$(SFC) $(PROMOTION) -I. $(LIBMVEC) $(FCDEBUG) $(FCBASEOPTS) $(FCSUFFIX)" TRADFLAG="-traditional" AR="$(AR)" ARFLAGS="$(ARFLAGS)" \ + FIXED="$(FORMAT_FIXED)" archive) + + wrfio_int : + ( cd $(WRF_SRC_ROOT_DIR)/external/io_int ; \ + make $(J) CC="$(CC)" CFLAGS_LOCAL="$(CFLAGS_LOCAL)" RM="$(RM)" RANLIB="$(RANLIB)" CPP="$(CPP)" \ +- FC="$(FC) $(PROMOTION) $(FCDEBUG) $(FCBASEOPTS) $(OMP)" FGREP="$(FGREP)" \ ++ FC="$(FC) $(PROMOTION) $(LIBMVEC) $(FCDEBUG) $(FCBASEOPTS) $(OMP)" FGREP="$(FGREP)" \ + TRADFLAG="$(TRADFLAG)" AR="$(AR)" ARFLAGS="$(ARFLAGS)" ARCHFLAGS="$(ARCHFLAGS)" all ) + + esmf_time : + ( cd $(WRF_SRC_ROOT_DIR)/external/esmf_time_f90 ; \ +- make $(J) FC="$(SFC) $(PROMOTION) $(FCDEBUG) $(FCBASEOPTS)" RANLIB="$(RANLIB)" \ ++ make $(J) FC="$(SFC) $(PROMOTION) $(LIBMVEC) $(FCDEBUG) $(FCBASEOPTS)" RANLIB="$(RANLIB)" \ + CPP="$(CPP) -I$(WRF_SRC_ROOT_DIR)/inc -I. $(ARCHFLAGS) $(TRADFLAG)" AR="$(AR)" ARFLAGS="$(ARFLAGS)" ) + + fftpack : + ( cd $(WRF_SRC_ROOT_DIR)/external/fftpack/fftpack5 ; \ +- make $(J) FC="$(SFC)" FFLAGS="$(PROMOTION) $(FCDEBUG) $(FCBASEOPTS)" RANLIB="$(RANLIB)" AR="$(AR)" \ ++ make $(J) FC="$(SFC)" FFLAGS="$(PROMOTION) $(LIBMVEC) $(FCDEBUG) $(FCBASEOPTS)" RANLIB="$(RANLIB)" AR="$(AR)" \ + ARFLAGS="$(ARFLAGS)" CPP="$(CPP)" CPPFLAGS="$(CPPFLAGS)" RM="$(RM)" ) + + atm_ocn : + ( cd $(WRF_SRC_ROOT_DIR)/external/atm_ocn ; \ + make $(J) CC="$(SCC)" CFLAGS="$(CFLAGS) " RM="$(RM)" RANLIB="$(RANLIB)" \ + CPP="$(CPP)" CPPFLAGS="$(CPPFLAGS)" \ +- FC="$(DM_FC) $(PROMOTION) -I. $(FCDEBUG) $(FCBASEOPTS) $(FCSUFFIX)" TRADFLAG="-traditional" AR="$(AR)" ARFLAGS="$(ARFLAGS)" \ ++ FC="$(DM_FC) $(PROMOTION) -I. $(LIBMVEC) $(FCDEBUG) $(FCBASEOPTS) $(FCSUFFIX)" TRADFLAG="-traditional" AR="$(AR)" ARFLAGS="$(ARFLAGS)" \ + FIXED="$(FORMAT_FIXED)" ) + + $(WRF_SRC_ROOT_DIR)/external/RSL_LITE/librsl_lite.a : + ( cd $(WRF_SRC_ROOT_DIR)/external/RSL_LITE ; make $(J) CC="$(CC) $(CFLAGS)" \ +- FC="$(FC) $(FCFLAGS) $(OMP) $(PROMOTION) $(BYTESWAPIO)" \ ++ FC="$(FC) $(FCFLAGS) $(LIBMVEC) $(OMP) $(PROMOTION) $(BYTESWAPIO)" \ + CPP="$(CPP) -I. $(ARCHFLAGS) $(OMPCPP) $(TRADFLAG)" AR="$(AR)" ARFLAGS="$(ARFLAGS)" ;\ + $(RANLIB) $(WRF_SRC_ROOT_DIR)/external/RSL_LITE/librsl_lite.a ) + +@@ -332,7 +332,7 @@ wrf_ioapi_includes : + + wrfio_esmf : + ( cd $(WRF_SRC_ROOT_DIR)/external/io_esmf ; \ +- make FC="$(FC) $(PROMOTION) $(FCDEBUG) $(FCBASEOPTS) $(ESMF_MOD_INC)" \ ++ make FC="$(FC) $(PROMOTION) $(LIBMVEC) $(FCDEBUG) $(FCBASEOPTS) $(ESMF_MOD_INC)" \ + RANLIB="$(RANLIB)" CPP="$(CPP) $(POUND_DEF) " AR="$(AR)" ARFLAGS="$(ARFLAGS)" ) + + # There is probably no reason to modify these rules +@@ -357,7 +357,7 @@ wrfio_esmf : + $(WRF_SRC_ROOT_DIR)/var/build/da_name_space.pl $*.f90 > $*.f90.tmp ; \ + mv $*.f90.tmp $*.f90 ; \ + fi +- $(FC) -o $@ -c $(FCFLAGS) $(OMP) $(MODULE_DIRS) $(PROMOTION) $(FCSUFFIX) $*.f90 ++ $(FC) -o $@ -c $(FCFLAGS) $(LIBMVEC) $(OMP) $(MODULE_DIRS) $(PROMOTION) $(FCSUFFIX) $*.f90 + + + .F.f90: +@@ -370,7 +370,7 @@ wrfio_esmf : + + .f90.o: + $(RM) $@ +- $(FC) -o $@ -c $(FCFLAGS) $(PROMOTION) $(FCSUFFIX) $*.f90 ++ $(FC) -o $@ -c $(FCFLAGS) $(LIBMVEC) $(PROMOTION) $(FCSUFFIX) $*.f90 + + setfeenv.o : setfeenv.c + $(RM) $@ +@@ -474,10 +474,10 @@ wrf_tsin.o : + fi + if $(FGREP) '!$$OMP' $*.f90 ; then \ + if [ -n "$(OMP)" ] ; then echo COMPILING $*.F WITH OMP ; fi ; \ +- $(FC) -c $(PROMOTION) $(FCNOOPT) $(FCBASEOPTS) $(MODULE_DIRS) $(FCSUFFIX) $(OMP) $*.f90 ; \ ++ $(FC) -c $(PROMOTION) $(FCNOOPT) $(LIBMVEC) $(FCBASEOPTS) $(MODULE_DIRS) $(FCSUFFIX) $(OMP) $*.f90 ; \ + else \ + if [ -n "$(OMP)" ] ; then echo COMPILING $*.F WITHOUT OMP ; fi ; \ +- $(FC) -c $(PROMOTION) $(FCNOOPT) $(FCBASEOPTS) $(MODULE_DIRS) $(FCSUFFIX) $*.f90 ; \ ++ $(FC) -c $(PROMOTION) $(FCNOOPT) $(LIBMVEC) $(FCBASEOPTS) $(MODULE_DIRS) $(FCSUFFIX) $*.f90 ; \ + fi + + #solve_em.o : +@@ -497,10 +497,10 @@ module_sf_ruclsm.o : + if $(FGREP) '!$$OMP' $*.f90 ; then \ + echo COMPILING $*.F WITH OMP ; \ + if [ -n "$(OMP)" ] ; then echo COMPILING $*.F WITH OMP ; fi ; \ +- $(FC) -c $(PROMOTION) $(FCREDUCEDOPT) $(FCBASEOPTS) $(MODULE_DIRS) $(FCSUFFIX) $(OMP) $*.f90 ; \ ++ $(FC) -c $(PROMOTION) $(FCREDUCEDOPT) $(LIBMVEC) $(FCBASEOPTS) $(MODULE_DIRS) $(FCSUFFIX) $(OMP) $*.f90 ; \ + else \ + if [ -n "$(OMP)" ] ; then echo COMPILING $*.F WITHOUT OMP ; fi ; \ +- $(FC) -c $(PROMOTION) $(FCREDUCEDOPT) $(FCBASEOPTS) $(MODULE_DIRS) $(FCSUFFIX) $*.f90 ; \ ++ $(FC) -c $(PROMOTION) $(FCREDUCEDOPT) $(LIBMVEC) $(FCBASEOPTS) $(MODULE_DIRS) $(FCSUFFIX) $*.f90 ; \ + fi + + # compile without OMP +@@ -547,4 +547,4 @@ module_configure.o : + mv $*.f90.tmp $*.f90 ; \ + fi + $(RM) $*.b $*.bb +- $(FC) -c $(PROMOTION) $(FCSUFFIX) $(FCNOOPT) $(FCBASEOPTS) $(MODULE_DIRS) $*.f90 ++ $(FC) -c $(PROMOTION) $(FCSUFFIX) $(LIBMVEC) $(FCNOOPT) $(FCBASEOPTS) $(MODULE_DIRS) $*.f90 diff --git a/var/spack/repos/builtin/packages/wrf/patches/3.9/configure_aocc.patch b/var/spack/repos/builtin/packages/wrf/patches/3.9/configure_aocc.patch new file mode 100644 index 0000000000..13b41a46b2 --- /dev/null +++ b/var/spack/repos/builtin/packages/wrf/patches/3.9/configure_aocc.patch @@ -0,0 +1,55 @@ +--- WRF-3.9.1.1/arch/configure_new.defaults 2017-08-29 01:59:47.000000000 +0530 ++++ WRF-3.9.1.1/arch/configure_391_aocc22.defaults 2020-12-23 10:06:29.764955610 +0530 +@@ -1917,6 +1917,52 @@ + CC_TOOLS = $(SCC) + + #insert new stanza here ++############################################################ ++#ARCH AMD EPYC Linux x86_64 AOCC Compilers #dm+sm ++# ++DESCRIPTION = AMD AOCC ($SFC/$SCC): EPYC ++DMPARALLEL = 1 ++OMPCPP = -D_OPENMP ++OMP = -fopenmp ++OMPCC = -fopenmp -Mpreprocess ++SFC = flang ++SCC = clang ++CCOMP = clang ++DM_FC = mpif90 -DMPI2_SUPPORT ++DM_CC = mpicc -DMPI2_SUPPORT ++FC = $(DM_FC) ++CC = $(DM_CC) -DFSEEKO64_OK ++LD = $(FC) ++RWORDSIZE = $(NATIVE_RWORDSIZE) ++PROMOTION = ++ARCH_LOCAL = -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM ++LIBMVEC = -mllvm --vector-library=LIBMVEC ++AMDARCHOPT = -march=native ++AOCCOPT = -O3 -m64 -Ofast -ffast-math $(AMDARCHOPT) ++CFLAGS_LOCAL = -w $(AOCCOPT) ++LDFLAGS_LOCAL = -lm -ltirpc -lamdlibm -ljemalloc -lmvec $(AOCCOPT) ++CPLUSPLUSLIB = ++ESMF_LDFLAG = $(CPLUSPLUSLIB) ++FCOPTIM = $(AOCCOPT) -fopenmp ++FCREDUCEDOPT = -O2 -Ofast -ffast-math ++FCNOOPT = -O0 -DFCNOOPT -fopenmp ++FCDEBUG = #-g ++FORMAT_FIXED = -Mfixed ++FORMAT_FREE = -Mfreeform ++FCSUFFIX = ++BYTESWAPIO = -Mbyteswapio ++FCBASEOPTS_NO_G = $(FORMAT_FREE) $(BYTESWAPIO) -fopenmp ++FCBASEOPTS = $(FCBASEOPTS_NO_G) $(FCDEBUG) -DBASEOPTS -fopenmp ++MODULE_SRCH_FLAG = ++TRADFLAG = -traditional ++CPP = /lib/cpp -P ++AR = llvm-ar ++ARFLAGS = ru ++M4 = m4 ++RANLIB = llvm-ranlib ++RLFLAGS = ++CC_TOOLS = $(SCC) ++ + + ########################################################### + #ARCH Fujitsu FX10/FX100 Linux x86_64 SPARC64IXfx/SPARC64Xlfx, mpifrtpx and mpifccpx compilers #serial smpar dmpar dm+sm