hlrs-software-stack/spack
7
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity

samtools: new version (#7921)

Browse source
This commit is contained in:
Levi Baber 2018-04-26 17:17:00 -05:00 committed by Adam J. Stewart
parent 963c103a67
commit 310addea91
1 changed files with 4 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

4
var/spack/repos/builtin/packages/samtools/package.py
View file

@ -33,6 +33,7 @@ class Samtools(Package):
homepage = "www.htslib.org" homepage = "www.htslib.org"
url = "https://github.com/samtools/samtools/releases/download/1.3.1/samtools-1.3.1.tar.bz2" url = "https://github.com/samtools/samtools/releases/download/1.3.1/samtools-1.3.1.tar.bz2"
version('1.7', '2240175242b5183bfa6baf1483f68023')
version('1.6', 'b756f05fd5d1a7042074417edb8c9aea') version('1.6', 'b756f05fd5d1a7042074417edb8c9aea')
version('1.4', '8cbd7d2a0ec16d834babcd6c6d85d691') version('1.4', '8cbd7d2a0ec16d834babcd6c6d85d691')
version('1.3.1', 'a7471aa5a1eb7fc9cc4c6491d73c2d88') version('1.3.1', 'a7471aa5a1eb7fc9cc4c6491d73c2d88')
@ -40,9 +41,12 @@ class Samtools(Package):
depends_on('ncurses') depends_on('ncurses')
# htslib became standalone @1.3.1, must use corresponding version # htslib became standalone @1.3.1, must use corresponding version
depends_on('htslib@1.7', when='@1.7')
depends_on('htslib@1.6', when='@1.6') depends_on('htslib@1.6', when='@1.6')
depends_on('htslib@1.4', when='@1.4') depends_on('htslib@1.4', when='@1.4')
depends_on('htslib@1.3.1', when='@1.3.1') depends_on('htslib@1.3.1', when='@1.3.1')
depends_on('zlib', when='@1.7:')
depends_on('bzip2', when='@1.7:')
def install(self, spec, prefix): def install(self, spec, prefix):
if self.spec.version >= Version('1.3.1'): if self.spec.version >= Version('1.3.1'):