hlrs-software-stack/spack
7
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity

py-illumina-utils: Create new package (#7745)

Browse source 
* py-illumina-utils: Create new package

* fix dependency types
This commit is contained in:
Eric 2018-04-12 22:45:21 -05:00 committed by Adam J. Stewart
parent 0091fda57b
commit 21914d36be
1 changed files with 43 additions and 0 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

43
var/spack/repos/builtin/packages/py-illumina-utils/package.py Normal file
View file

@ -0,0 +1,43 @@
##############################################################################
# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/spack/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class PyIlluminaUtils(PythonPackage):
"""A library and collection of scripts to work with Illumina paired-end
data (for CASAVA 1.8+)."""
homepage = "https://github.com/meren/illumina-utils"
url = "https://pypi.io/packages/source/i/illumina-utils/illumina-utils-2.2.tar.gz"
version('2.3', 'c0af71723e52ab2b14660d2138620e39')
version('2.2', '9e19cf112ccc38a903fc41f431804d21')
depends_on('python@3:', type=('build', 'run'))
depends_on('py-pip', type='build')
depends_on('py-setuptools', type='build')
depends_on('py-matplotlib', type=('build', 'run'))
depends_on('py-numpy', type=('build', 'run'))
depends_on('py-python-levenshtein', type=('build', 'run'))