Initial commit for freesurfer package (#32395)
* Initial commit for freesurfer package * Add myself as maintainer * Change URLs to https and move url function to proper place.
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var/spack/repos/builtin/packages/freesurfer/package.py
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var/spack/repos/builtin/packages/freesurfer/package.py
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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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from spack.package import *
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class Freesurfer(Package):
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"""Freesurfer is an open source software suite for processing and analyzing
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(human) brain MRI images."""
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homepage = "https://freesurfer.net/"
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# A license is required, but is free to obtain.
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license_required = True
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license_files = ["./license.txt"]
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maintainers = ["robgics"]
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version("7.2.0", sha256="4cca78602f898bf633428b9d82cbb9b07e3ab97a86c620122050803779c86d62")
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version("7.1.1", sha256="6098b166fee8644f44f9ec88f3ffe88d05f2bc033cca60443e99e3e56f2e166b")
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version("7.1.0", sha256="1b8f26fe5c712433ddb74c47fe1895ed1d9fbff46cfae8aaae2697cb65ae8840")
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depends_on("mesa-glu")
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depends_on("qt")
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def url_for_version(self, version):
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return "https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/{0}/freesurfer-linux-centos7_x86_64-{1}.tar.gz".format(
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version, version
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)
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def setup_run_environment(self, env):
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env.prepend_path("PATH", self.prefix.bin)
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env.set("FREESURFER_HOME", self.prefix)
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env.set("SUBJECTS_DIR", join_path(self.prefix, "subjects"))
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env.set("FUNCTIONALS_DIR", join_path(self.prefix, "sessions"))
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def install(self, spec, prefix):
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install_tree(".", prefix)
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