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r-genomicalignments: package update (#7791)

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Matteo Guglielmi 2018-04-17 19:54:36 +02:00 committed by Adam J. Stewart
parent 025e608fd5
commit 02181c951a
1 changed files with 13 additions and 9 deletions
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var/spack/repos/builtin/packages/r-genomicalignments/package.py
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@ -35,15 +35,19 @@ class RGenomicalignments(RPackage):
url = "https://git.bioconductor.org/packages/GenomicAlignments" url = "https://git.bioconductor.org/packages/GenomicAlignments"
list_url = homepage list_url = homepage
version('1.14.2', git='https://git.bioconductor.org/packages/GenomicAlignments', commit='57b0b35d8b36069d4d94af86af051f0129b28eef')
version('1.12.2', git='https://git.bioconductor.org/packages/GenomicAlignments', commit='b5d6f19e4a89b6c1c3e9e58e5ea4eb13870874ef') version('1.12.2', git='https://git.bioconductor.org/packages/GenomicAlignments', commit='b5d6f19e4a89b6c1c3e9e58e5ea4eb13870874ef')
depends_on('r-biocgenerics', type=('build', 'run')) depends_on('r-biocgenerics@0.15.3:', type=('build', 'run'))
depends_on('r-s4vectors', type=('build', 'run')) depends_on('r-s4vectors@0.13.13:', type=('build', 'run'))
depends_on('r-iranges', type=('build', 'run')) depends_on('r-iranges@2.5.36:', type=('build', 'run'), when='@1.12.2')
depends_on('r-genomeinfodb', type=('build', 'run')) depends_on('r-iranges@2.11.16:', type=('build', 'run'), when='@1.14.2')
depends_on('r-genomicranges', type=('build', 'run')) depends_on('r-genomeinfodb@1.11.5:', type=('build', 'run'), when='@1.12.2')
depends_on('r-summarizedexperiment', type=('build', 'run')) depends_on('r-genomeinfodb@1.13.1:', type=('build', 'run'), when='@1.14.2')
depends_on('r-biostrings', type=('build', 'run')) depends_on('r-genomicranges@1.27.19:', type=('build', 'run'), when='@1.12.2')
depends_on('r-rsamtools', type=('build', 'run')) depends_on('r-genomicranges@1.29.14:', type=('build', 'run'), when='@1.14.2')
depends_on('r-summarizedexperiment@1.5.3:', type=('build', 'run'))
depends_on('r-biostrings@2.37.1:', type=('build', 'run'))
depends_on('r-rsamtools@1.21.4:', type=('build', 'run'))
depends_on('r-biocparallel', type=('build', 'run')) depends_on('r-biocparallel', type=('build', 'run'))
depends_on('r@3.4.0:3.4.9', when='@1.12.2') depends_on('r@3.4.0:3.4.9', when='@1.12.2:')