#----------------------------------*-sh-*-------------------------------------- # ========= | # \\ / F ield | OpenFOAM: The Open Source CFD Toolbox # \\ / O peration | # \\ / A nd | Copyright held by original author # \\/ M anipulation | #------------------------------------------------------------------------------ # License # This file is part of OpenFOAM. # # OpenFOAM is free software; you can redistribute it and/or modify it # under the terms of the GNU General Public License as published by the # Free Software Foundation; either version 2 of the License, or (at your # option) any later version. # # OpenFOAM is distributed in the hope that it will be useful, but WITHOUT # ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or # FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License # for more details. # # You should have received a copy of the GNU General Public License # along with OpenFOAM; if not, write to the Free Software Foundation, # Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA # # Script # etc/settings.sh # # Description # Startup file for OpenFOAM # Sourced from OpenFOAM-??/etc/bashrc # #------------------------------------------------------------------------------ # prefix to PATH _foamAddPath() { while [ $# -ge 1 ] do export PATH=$1:$PATH shift done } # prefix to LD_LIBRARY_PATH _foamAddLib() { while [ $# -ge 1 ] do export LD_LIBRARY_PATH=$1:$LD_LIBRARY_PATH if [ "$WM_ARCH_BASE" == "darwin" ] then export DYLD_LIBRARY_PATH=$1:$DYLD_LIBRARY_PATH fi shift done } # Source files, possibly with some verbosity # Yes, this is the same definition as in the file etc/bash # We need that definition available for scripts sourcing # settings.sh directly. _foamSource() { while [ $# -ge 1 ] do [ "$FOAM_VERBOSE" -a "$PS1" ] && echo "Sourcing: $1" . $1 shift done } # location of the jobControl directory export FOAM_JOB_DIR=$WM_PROJECT_INST_DIR/jobControl # wmake configuration export WM_DIR=$WM_PROJECT_DIR/wmake export WM_LINK_LANGUAGE=c++ export WM_OPTIONS=$WM_ARCH$WM_COMPILER$WM_PRECISION_OPTION$WM_COMPILE_OPTION export PATH=$WM_DIR:$PATH #export WM_DECOMP_INC=-DCELL_DECOMP #export WM_DECOMP_LIBS="-lcellDecompFiniteElement -lcellDecompositionMotionSolver" export WM_DECOMP_INC=-DFACE_DECOMP export WM_DECOMP_LIBS="-lfaceDecompFiniteElement -lfaceDecompositionMotionSolver" # base configuration export FOAM_APP=$WM_PROJECT_DIR/applications export FOAM_APPBIN=$WM_PROJECT_DIR/applications/bin/$WM_OPTIONS export FOAM_LIB=$WM_PROJECT_DIR/lib export FOAM_LIBBIN=$WM_PROJECT_DIR/lib/$WM_OPTIONS export FOAM_SRC=$WM_PROJECT_DIR/src # shared site configuration - similar naming convention as ~OpenFOAM expansion export FOAM_SITE_APPBIN=$WM_PROJECT_INST_DIR/site/$WM_PROJECT_VERSION/bin/$WM_OPTIONS export FOAM_SITE_LIBBIN=$WM_PROJECT_INST_DIR/site/$WM_PROJECT_VERSION/lib/$WM_OPTIONS # user configuration export FOAM_USER_APPBIN=$WM_PROJECT_USER_DIR/applications/bin/$WM_OPTIONS export FOAM_USER_LIBBIN=$WM_PROJECT_USER_DIR/lib/$WM_OPTIONS # convenience export FOAM_TUTORIALS=$WM_PROJECT_DIR/tutorials export FOAM_UTILITIES=$FOAM_APP/utilities export FOAM_SOLVERS=$FOAM_APP/solvers export FOAM_RUN=$WM_PROJECT_USER_DIR/run # add OpenFOAM scripts and wmake to the path export PATH=$WM_DIR:$WM_PROJECT_DIR/bin:$PATH _foamAddPath $FOAM_APPBIN $FOAM_SITE_APPBIN $FOAM_USER_APPBIN # Make sure to pick up dummy versions of external libraries last _foamAddLib $FOAM_LIBBIN/dummy _foamAddLib $FOAM_LIBBIN $FOAM_SITE_LIBBIN $FOAM_USER_LIBBIN # Compiler settings # ~~~~~~~~~~~~~~~~~ unset compilerBin compilerLib # Select compiler installation # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ # compilerInstall = OpenFOAM | System #compilerInstall=OpenFOAM compilerInstall=System case "${compilerInstall:-OpenFOAM}" in OpenFOAM) case "$WM_COMPILER" in Gcc) export WM_COMPILER_DIR=$WM_THIRD_PARTY_DIR/gcc-4.3.3/platforms/$WM_ARCH$WM_COMPILER_ARCH _foamAddLib $WM_THIRD_PARTY_DIR/mpfr-2.4.1/platforms/$WM_ARCH$WM_COMPILER_ARCH/lib _foamAddLib $WM_THIRD_PARTY_DIR/gmp-4.2.4/platforms/$WM_ARCH$WM_COMPILER_ARCH/lib ;; Gcc43) export WM_COMPILER_DIR=$WM_THIRD_PARTY_DIR/gcc-4.3.3/platforms/$WM_ARCH$WM_COMPILER_ARCH _foamAddLib $WM_THIRD_PARTY_DIR/mpfr-2.4.1/platforms/$WM_ARCH$WM_COMPILER_ARCH/lib _foamAddLib $WM_THIRD_PARTY_DIR/gmp-4.2.4/platforms/$WM_ARCH$WM_COMPILER_ARCH/lib ;; Gcc42) export WM_COMPILER_DIR=$WM_THIRD_PARTY_DIR/gcc-4.2.4/platforms/$WM_ARCH$WM_COMPILER_ARCH ;; esac # Check that the compiler directory can be found if [ ! -d "$WM_COMPILER_DIR" ] then echo echo "Warning in $WM_PROJECT_DIR/etc/settings.sh:" echo " Cannot find $WM_COMPILER_DIR installation." echo " Please install this compiler version or if you wish to use the system compiler," echo " change the 'compilerInstall' setting to 'System' in this file" echo fi compilerBin=$WM_COMPILER_DIR/bin compilerLib=$WM_COMPILER_DIR/lib$WM_COMPILER_LIB_ARCH:$WM_COMPILER_DIR/lib ;; esac if [ -d "$compilerBin" ] then _foamAddPath $compilerBin _foamAddLib $compilerLib fi unset compilerBin compilerLib compilerInstall case "$WM_COMPILER" in Gcc) export WM_CC='gcc' export WM_CXX='g++' ;; Icc) export WM_CC='icc' export WM_CXX='icpc' ;; esac # Communications library # ~~~~~~~~~~~~~~~~~~~~~~ unset MPI_ARCH_PATH mpi_version=unknown case "$WM_MPLIB" in OPENMPI) if [ -e $WM_THIRD_PARTY_DIR/packages/openmpi-1.4.3 ] then mpi_version=openmpi-1.4.3 if [ "$FOAM_VERBOSE" -a "$PS1" ] then echo "Using openmpi-1.4.3 from the ThirdParty package: $WM_THIRD_PARTY_DIR/packages/$mpi_version" fi _foamSource $WM_THIRD_PARTY_DIR/packages/$mpi_version/platforms/$WM_OPTIONS/etc/$mpi_version.sh elif [ -e $WM_THIRD_PARTY_DIR/packages/openmpi-1.5 ] then mpi_version=openmpi-1.5 if [ "$FOAM_VERBOSE" -a "$PS1" ] then echo "Using openmpi-1.5 from the ThirdParty package: $WM_THIRD_PARTY_DIR/packages/$mpi_version" fi _foamSource $WM_THIRD_PARTY_DIR/packages/$mpi_version/platforms/$WM_OPTIONS/etc/$mpi_version.sh fi export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/$mpi_version unset mpi_version ;; SYSTEMOPENMPI) mpi_version=openmpi-system # make sure not the "old" mpi is used # Not sure if this is necessary anymore. # export OPAL_PREFIX= # Make sure OPENMPI_BIN_DIR is set and valid if [ -n "${OPENMPI_BIN_DIR}" ] && [ -d "${OPENMPI_BIN_DIR}" ] then # User defined value specified for OPENMPI_BIN_DIR # # WARNING: # We assume this path specified by $OPENMPI_BIN_DIR is valid # We assume the command mpicc is located somewhere under this path # We assume the file mpi.h is located somewhere under this path # # Otherwise, please double check your openmpi installation, you are # probably missing the openmpi runtime and/or development packages # available for your system. # _foamAddPath $OPENMPI_BIN_DIR else # Here, we assume your environment is already set for running # and developping with openmpi. # # Initialize OPENMPI_BIN_DIR using the path to mpicc export OPENMPI_BIN_DIR=$(dirname `which mpicc`) fi # Make sure OPENMPI_LIB_DIR is set if [ ! -n "${OPENMPI_LIB_DIR}" ] then # Initialize OPENMPI_LIB_DIR using the path to mpicc export OPENMPI_LIB_DIR="`mpicc --showme:libdirs`" fi # Make sure the dynamic libraries are accessible [ -n "${OPENMPI_LIB_DIR}" ] && _foamAddLib $OPENMPI_LIB_DIR export MPI_HOME=`dirname $OPENMPI_BIN_DIR` export MPI_ARCH_PATH=$MPI_HOME export OPAL_PREFIX=$MPI_ARCH_PATH # We initialize the rest of the environment using mpicc --showme: [ ! -n "${OPENMPI_INCLUDE_DIR}" ] && export OPENMPI_INCLUDE_DIR="`mpicc --showme:incdirs`" [ ! -n "${OPENMPI_COMPILE_FLAGS}" ] && export OPENMPI_COMPILE_FLAGS="`mpicc --showme:compile`" [ ! -n "${OPENMPI_LINK_FLAGS}" ] && export OPENMPI_LINK_FLAGS="`mpicc --showme:link`" # # WARNING: We assume the file mpi.h will be available under the directories identified # by the variable $OPENMPI_INCLUDE_DIR. Otherwise, please double check your # system openmpi installation. # Set compilation flags here instead of in wmake/rules/../mplibSYSTEMOPENMPI export PINC=$OPENMPI_COMPILE_FLAGS export PLIBS=$OPENMPI_LINK_FLAGS # No longer needed, but we keep this as a reference, just in case... #libDir=`echo "$PLIBS" | sed -e 's/.*-L\([^ ]*\).*/\1/'` #_foamAddLib $libDir if [ "$FOAM_VERBOSE" -a "$PS1" ] then echo "Using system installed OpenMPI:" echo " OPENMPI_BIN_DIR : $OPENMPI_BIN_DIR" echo " OPENMPI_LIB_DIR : $OPENMPI_LIB_DIR" echo " OPENMPI_INCLUDE_DIR : $OPENMPI_INCLUDE_DIR" echo " OPENMPI_COMPILE_FLAGS : $OPENMPI_COMPILE_FLAGS" echo " OPENMPI_LINK_FLAGS : $OPENMPI_LINK_FLAGS" echo "" echo " MPI_HOME : $MPI_HOME" echo " MPI_ARCH_PATH : $MPI_ARCH_PATH" echo " OPAL_PREFIX : $OPAL_PREFIX" echo " PINC : $PINC" echo " PLIBS : $PLIBS" fi export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/$mpi_version unset mpi_version ;; MPICH) mpi_version=mpich-1.2.4 export MPI_HOME=$WM_THIRD_PARTY_DIR/$mpi_version export MPI_ARCH_PATH=$MPI_HOME/platforms/$WM_OPTIONS export MPICH_ROOT=$MPI_ARCH_PATH _foamAddPath $MPI_ARCH_PATH/bin _foamAddLib $MPI_ARCH_PATH/lib export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/$mpi_version unset mpi_version ;; MPICH-GM) export MPI_ARCH_PATH=/opt/mpi export MPICH_PATH=$MPI_ARCH_PATH export MPICH_ROOT=$MPI_ARCH_PATH export GM_LIB_PATH=/opt/gm/lib64 _foamAddPath $MPI_ARCH_PATH/bin _foamAddLib $MPI_ARCH_PATH/lib _foamAddLib $GM_LIB_PATH export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/mpich-gm ;; HPMPI) export MPI_HOME=/opt/hpmpi export MPI_ARCH_PATH=$MPI_HOME export MPICH_ROOT=$MPI_ARCH_PATH _foamAddPath $MPI_ARCH_PATH/bin case `uname -m` in i686) _foamAddLib $MPI_ARCH_PATH/lib/linux_ia32 ;; x86_64) _foamAddLib $MPI_ARCH_PATH/lib/linux_amd64 ;; ia64) _foamAddLib $MPI_ARCH_PATH/lib/linux_ia64 ;; *) echo Unknown processor type `uname -m` for Linux ;; esac export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/hpmpi ;; GAMMA) export MPI_ARCH_PATH=/usr export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/gamma ;; MPI) export MPI_ARCH_PATH=/opt/mpi export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/mpi ;; FJMPI) export MPI_ARCH_PATH=/opt/FJSVmpi2 export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/mpi _foamAddPath $MPI_ARCH_PATH/bin _foamAddLib $MPI_ARCH_PATH/lib/sparcv9 _foamAddLib /opt/FSUNf90/lib/sparcv9 _foamAddLib /opt/FJSVpnidt/lib ;; QSMPI) export MPI_ARCH_PATH=/usr/lib/mpi export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/qsmpi _foamAddPath $MPI_ARCH_PATH/bin _foamAddLib $MPI_ARCH_PATH/lib ;; *) export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/dummy ;; esac _foamAddLib $FOAM_MPI_LIBBIN # Set the minimum MPI buffer size (used by all platforms except SGI MPI) # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ minBufferSize=20000000 if [ "${MPI_BUFFER_SIZE:=$minBufferSize}" -lt $minBufferSize ] then MPI_BUFFER_SIZE=$minBufferSize fi export MPI_BUFFER_SIZE # CGAL library if available # ~~~~~~~~~~~~~~~~~~~~~~~~~ [ -d "$CGAL_LIB_DIR" ] && _foamAddLib $CGAL_LIB_DIR # Switch on the hoard memory allocator if available # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ #if [ -f $FOAM_LIBBIN/libhoard.so ] #then # export LD_PRELOAD=$FOAM_LIBBIN/libhoard.so:$LD_PRELOAD #fi # HOARD seems to crash Paraview on Mac OS X 10.6 #if [ -f $FOAM_LIBBIN/libhoard.dylib ] #then # if [ -z "$DYLD_INSERT_LIBRARIES" ] # then # export DYLD_INSERT_LIBRARIES=$FOAM_LIBBIN/libhoard.dylib # else # export DYLD_INSERT_LIBRARIES=$FOAM_LIBBIN/libhoard.dylib:$DYLD_INSERT_LIBRARIES # fi #fi # Third party packages # # In order to use a pre-installed version of the ThirdParty packages, just set the # appropriate XXX_SYSTEM environment variable for a given package in your prefs.sh # file in order to disable the sourcing of the ThirdParty version of the same package. # Load Mesquite library # ~~~~~~~~~~~~~~~~~~~~~~ [ -z "$MESQUITE_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/mesquite-2.1.2 ] && { _foamSource $WM_THIRD_PARTY_DIR/packages/mesquite-2.1.2/platforms/$WM_OPTIONS/etc/mesquite-2.1.2.sh } [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " MESQUITE_DIR is initialized to: $MESQUITE_DIR" # Load Metis library # ~~~~~~~~~~~~~~~~~~ [ -z "$METIS_SYSTEM" ] && [ -d $WM_THIRD_PARTY_DIR/packages/metis-5.0pre2 ] && { _foamSource $WM_THIRD_PARTY_DIR/packages/metis-5.0pre2/platforms/$WM_OPTIONS/etc/metis-5.0pre2.sh } [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " METIS_DIR is initialized to: $METIS_DIR" # Load ParMetis library # ~~~~~~~~~~~~~~~~~~~~~ [ -z "$PARMETIS_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/ParMetis-3.1.1 ] && { _foamSource $WM_THIRD_PARTY_DIR/packages/ParMetis-3.1.1/platforms/$WM_OPTIONS/etc/ParMetis-3.1.1.sh } [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " PARMETIS_DIR is initialized to: $PARMETIS_DIR" # Load ParMGridGen library # ~~~~~~~~~~~~~~~~~~~~~~~~~ [ -z "$PARMGRIDGEN_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/ParMGridGen-1.0 ] && { _foamSource $WM_THIRD_PARTY_DIR/packages/ParMGridGen-1.0/platforms/$WM_OPTIONS/etc/ParMGridGen-1.0.sh } [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " PARMGRIDGEN_DIR is initialized to: $PARMGRIDGEN_DIR" # Load Libccmio library # ~~~~~~~~~~~~~~~~~~~~~ [ -z "$LIBCCMIO_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/libccmio-2.6.1 ] && { _foamSource $WM_THIRD_PARTY_DIR/packages/libccmio-2.6.1/platforms/$WM_OPTIONS/etc/libccmio-2.6.1.sh } [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " LIBCCMIO_DIR is initialized to: $LIBCCMIO_DIR" # Load Scotch library # ~~~~~~~~~~~~~~~~~~~ [ -z "$SCOTCH_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/scotch-5.1.10b ] && { _foamSource $WM_THIRD_PARTY_DIR/packages/scotch-5.1.10b/platforms/$WM_OPTIONS/etc/scotch-5.1.10b.sh } [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " SCOTCH_DIR is initialized to: $SCOTCH_DIR" # Load cmake # ~~~~~~~~~~ [ -z "$CMAKE_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/cmake-2.8.3 ] && { _foamSource $WM_THIRD_PARTY_DIR/packages/cmake-2.8.3/platforms/$WM_OPTIONS/etc/cmake-2.8.3.sh } [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " CMAKE_DIR is initialized to: $CMAKE_DIR" # Load Python # ~~~~~~~~~~~ [ -z "$PYTHON_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/Python-2.7 ] && { _foamSource $WM_THIRD_PARTY_DIR/packages/Python-2.7/platforms/$WM_OPTIONS/etc/Python-2.7.sh } [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " PYTHON_DIR is initialized to: $PYTHON_DIR" # Load QT # ~~~~~~~ [ ! -z "$QT_THIRD_PARTY" ] && [ -e $WM_THIRD_PARTY_DIR/packages/qt-everywhere-opensource-src-4.7.0 ] && { _foamSource $WM_THIRD_PARTY_DIR/packages/qt-everywhere-opensource-src-4.7.0/platforms/$WM_OPTIONS/etc/qt-everywhere-opensource-src-4.7.0.sh } [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " QT_DIR is initialized to: $QT_DIR" # Load ParaView # ~~~~~~~~~~~~~ [ -z "$PARAVIEW_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/ParaView-3.8.1 ] && { _foamSource $WM_THIRD_PARTY_DIR/packages/ParaView-3.8.1/platforms/$WM_OPTIONS/etc/ParaView-3.8.1.sh } [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " PARAVIEW_DIR is initialized to: $PARAVIEW_DIR" # cleanup environment: # ~~~~~~~~~~~~~~~~~~~~ unset _foamAddPath _foamAddLib minBufferSize # -----------------------------------------------------------------------------