/*--------------------------------*- C++ -*----------------------------------*\ | ========= | | | \\ / F ield | foam-extend: Open Source CFD | | \\ / O peration | Version: 3.1 | | \\ / A nd | Web: http://www.extend-project.de | | \\/ M anipulation | | \*---------------------------------------------------------------------------*/ FoamFile { version 2.0; format ascii; class dictionary; object potentials; } // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // Subdictionaries specifying types of intermolecular potential. // Sub-sub dictionaries specify the potentials themselves. // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // Removal order // This is the order in which to remove overlapping pairs if more than one // type of molecule is present. The most valuable molecule type is at the // right hand end, the molecule that will be removed 1st is 1st on the list. // Not all types need to be present, a molecule that is not present is // automatically less valuable than any on the list. For molecules of the // same type there is no control over which is removed. removalOrder ( water ); // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // Potential Energy Limit // Maximum permissible pair energy allowed at startup. Used to remove // overlapping molecules created during preprocessing. potentialEnergyLimit 1e-18; // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // Pair potentials // If a pair are not present here it is assumed that they do not interact. // Electrostatic pair interactions are not listed here - they are handled // separately. // If there are r different type of molecules, and a pair force is required // between all combinations, then there are C = r(r+1)/2 combinations, // i.e. for r = {1,2,3,4}, C = {1,3,6,10} (sum of triangular numbers). // Pair potentials are specified by the combinaition of their ids, // for MOLA and MOLB, "MOLA-MOLB" OR "MOLB-MOLA" is acceptable // (strictly OR, both or neither will throw an error) pair { O-O { pairPotential lennardJones; rCut 1.0e-9; rMin 0.1e-9; dr 1e-13; lennardJonesCoeffs { sigma 3.154e-10; epsilon 1.07690722e-21; } energyScalingFunction noScaling; writeTables yes; } electrostatic { pairPotential dampedCoulomb; rCut 1e-9; rMin 2e-11; dr 2e-12; dampedCoulombCoeffs { alpha 2e9; } energyScalingFunction shiftedForce; writeTables yes; } } // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // Tethering Potentials tether { O { tetherPotential restrainedHarmonicSpring; restrainedHarmonicSpringCoeffs { springConstant 0.277; rR 1.2e-9; } } } // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // // External Forces // Bulk external forces (namely gravity) will be specified as forces rather // than potentials to allow their direction to be controlled. external { gravity (0 0 0); } // ************************************************************************* //