#!/bin/sh #------------------------------------------------------------------------------ # ========= | # \\ / F ield | foam-extend: Open Source CFD # \\ / O peration | Version: 4.0 # \\ / A nd | Web: http://www.foam-extend.org # \\/ M anipulation | For copyright notice see file Copyright #------------------------------------------------------------------------------ # License # This file is part of foam-extend. # # foam-extend is free software: you can redistribute it and/or modify it # under the terms of the GNU General Public License as published by the # Free Software Foundation, either version 3 of the License, or (at your # option) any later version. # # foam-extend is distributed in the hope that it will be useful, but # WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU # General Public License for more details. # # You should have received a copy of the GNU General Public License # along with foam-extend. If not, see . # # Script # foamJob # # Description # #------------------------------------------------------------------------------ usage() { while [ "$#" -ge 1 ]; do echo "$1"; shift; done cat< ... options: -case dir specify case directory -s also sends output to screen -p parallel run of processors -v ver specify OpenFOAM version -help this usage * run an OpenFOAM job in background. Redirects the output to 'log' in the case directory USAGE exit 1 } unset version # replacement for possibly buggy 'which' findExec() { case "$1" in */*) if [ -x "$1" ] ; then echo "$1" return 0 fi ;; esac oldIFS=$IFS IFS=':' for d in $PATH do # echo "testing: $d/$1" 1>&2 if [ -x "$d/$1" -a ! -d "$d/$1" ] ; then # echo "Found exec: $d/$1" 1>&2 IFS=$oldIFS echo "$d/$1" return 0 fi done IFS=$oldIFS echo "" return 1 } # grep for $1 getPID() { ps -u $LOGNAME -o 'pid,args' | fgrep "$1 " | fgrep -v grep | head -1 | awk '{ print $1 }' } consultGuide() { cat</dev/null || usage "directory does not exist: '$caseDir'" ;; -s) SCREEN=yes shift ;; -p) PARALLEL=yes shift ;; -v) shift version=$1 shift ;; --) shift break ;; -*) usage "invalid option '$1'" ;; *) break ;; esac done if [ "$#" -lt 1 ]; then usage "No application specified" fi # use foamExec for a specified version and for remote (parallel) runs if [ -n "$version" -o "$PARALLEL" = yes ]; then APPLICATION=`findExec foamExec` if [ $? -ne 0 ]; then usage "'foamExec' not found" fi if [ -n "$version" ]; then APPLICATION="$APPLICATION -v $version" fi else APPLICATION=`findExec $1` if [ $? -ne 0 ]; then usage "Application '$1' executable not found" fi echo "Application : $1" shift fi if [ "$PARALLEL" = no ]; then # # RUN ON SINGLE PROCESSOR # if [ "$SCREEN" = no ]; then echo "Executing: $APPLICATION $@ > log 2>&1 &" $APPLICATION $@ > log 2>&1 & else echo "Executing: $APPLICATION $@ | tee log &" $APPLICATION $@ | tee log & wait $! fi else # # IS THE CASE DECOMPOSED? # if [ -r "processor0" ] ; then NPROCS="`/bin/ls -1d processor* | wc -l`" else echo "Case is not currently decomposed" if [ -r system/decomposeParDict ] ; then echo "system/decomposeParDict exists" echo "Try decomposing with \"foamJob decomposePar\"" exit 1 else echo "Cannot find system/decomposeParDict file required to decompose the case for parallel running." consultGuide exit 1 fi fi # # LOCATE MPIRUN # mpirun=`findExec mpirun` if [ $? -ne 0 ]; then usage "'mpirun' not found" fi mpiopts="-np $NPROCS" # # IS THE MACHINE READY TO RUN PARALLEL? # echo "Parallel processing using $WM_MPLIB with $NPROCS processors" case "$WM_MPLIB" in OPENMPI) # add hostfile info for hostfile in \ hostfile \ machines \ system/hostfile \ system/machines \ ; do if [ -r $hostfile ]; then mpiopts="$mpiopts -hostfile $hostfile" break fi done ;; esac # # RUN IN PARALLEL # if [ "$SCREEN" = no ] ; then echo "Executing: mpirun $mpiopts $APPLICATION $@ -parallel > log 2>&1" $mpirun $mpiopts $APPLICATION $@ -parallel > log 2>&1 & else echo "Executing: mpirun $mpiopts $APPLICATION $@ -parallel | tee log" $mpirun $mpiopts $APPLICATION $@ -parallel | tee log fi fi #------------------------------------------------------------------------------