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Author SHA1 Message Date
Vuko Vukcevic
a29e1ead28 Refactored dynamicPolyRefinementFvMesh class 
Enabled automatic switching between polyhedralRefinement engine for 3D and
prismatic2DRefinement engine for 2D.
 2018-07-05 07:17:57 +02:00
Vuko Vukcevic
2d845a809c Updates to polyhedralRefinement engine 
1. Make sure that we don't refine over maximum refinement level when extending
   refinement cells over additional buffer layers,
2. Removed redundancy check which becomes wrong in case we are running dynamic
   load balancing,
3. Removed deprecated hard-code where the cells protected from unrefinement are
   extended by nUnrefinementBufferLayers_ + 2 instead of just
   nUnrefinementBufferLayers_
 2018-07-05 07:17:57 +02:00
Vuko Vukcevic
a913c28897 Updates to prismatic2DRefinement.C related to unrefinement 
Enabled unrefinement (splitting of boundary points and removing internal faces)
using the existing removeFaces engine.
 2018-07-05 07:17:57 +02:00
Vuko Vukcevic
7524014a37 2D AMR: prismatic2DRefinement polyMeshModifier 
Ported prismatic2DRefinement class from other temporary repository. Basically a
version of polyhedralRefinement specifically designed for 2D cases.

Status:
Refinement seems to work well on simple cases:
  1. 4 by 4 hex cells (quad prisms),
  2. 28 triangular prisms,
  3. Tested both in serial and parallel up to 9 refinement levels.

To do:
  1. Implement proper 2D unrefinement,
  2. Refactor prismatic2DRefinement and polyhedralRefinement to avoid duplicate
     functions used by both classes.
 2018-07-05 07:17:57 +02:00
Martin Beaudoin
b59cad23fd ThirdParty: bumping openmpi to version 3.1.1 2018-07-04 22:54:35 -04:00
Martin Beaudoin
1c5b0bc3cc ParaView plugin compilation: syntax adjustments for newer versions of CMake 2018-07-01 22:51:57 -04:00
Martin Beaudoin
903e06f5ab ThirdParty: ParaView-5.5.2: adjustments to automatically generated .sh and .csh 
package configuration files
 2018-07-01 22:48:52 -04:00
Martin Beaudoin
e8c1beed0e ThirdParty: bumping Paraview to version 5.5.2 2018-07-01 20:41:56 -04:00
Martin Beaudoin
99c20324fc ThirdParty: bumping the QT library to version 5.11.1. Improving the compilation 
configuration options based on Kitware's ParaView-Superbuild package
 2018-07-01 13:16:26 -04:00
Martin Beaudoin
f8cfd5a100 Ignoring .xz file for Git 2018-07-01 13:13:57 -04:00
Martin Beaudoin
814ed82294 ThirdParty: adjust maximum timeout for curl downloads 2018-07-01 12:57:35 -04:00
Martin Beaudoin
6be52fe7e8 ThirdParty: bumping mesquite to version 2.3.0 2018-06-28 20:40:30 -04:00
Martin Beaudoin
17a3e12763 ThirdParty: add support for PyFoam version 0.6.6 and 0.6.9. Make PyFoam 0.6.9 the default version 2018-06-27 22:56:01 -04:00
Martin Beaudoin
1e973d5fe6 ThirdParty: bumping hwloc to version 2.0.1 2018-06-27 18:40:28 -04:00
Martin Beaudoin
8201aa30bd Add a MPIRUN_OPTIONS environment variable when using the runParallel shell function. 
When using OpenMPI 3.1.0, one could specify the runtime parameter '-oversubscribe' to mpirun
 2018-06-26 22:21:14 -04:00
Martin Beaudoin
454253dbe9 ThirdParty: adding some retry/timeout robustness parameters to the curl download command for the packages' source code. 2018-06-25 23:53:45 -04:00
Martin Beaudoin
f2a471c5c8 ThirdParty: 
- Bumping cmake to version 3.11.4
 - Bumping openmpi to version 3.1.0
 2018-06-25 22:59:38 -04:00
Martin Beaudoin
8a12411d38 ThirdParty: modification to the bash uninstallPackage() function. 
Make it easier to read, and more portable.
 2018-06-25 22:37:58 -04:00
Martin Beaudoin
6aba1630ed Minor corrections for compiling under macOS High Sierra (10.13.5) using 
the stock compiler Apple LLVM version 9.1.0 (clang-902.0.39.2)
 2018-06-24 22:15:40 -04:00
Hrvoje Jasak
e01e16c943 Refactorization of incompressible/compressible nut/mut wall functions. Author: Vuko Vukcevic. Merge: Hrvoje Jasak. 2018-06-20 13:34:29 +01:00
Hrvoje Jasak
d311db5954 Added public member functions that return accelerations (translational and rotational). Author: Vuko Vukcevic. Merge: Hrvoje Jasak. 2018-06-20 13:33:16 +01:00
Vuko Vukcevic
9e53ac1209 Updated mut in all tutorials 
Using mutkWallFunction instead of mutWallFunction (this is abstract base now and
mutkWallFunction is the same as previous mutWallFunction)
 2018-06-19 15:43:53 +02:00
Vuko Vukcevic
7167d46046 Updated nut in all tutorials 
Using nutkWallFunction instead of nutWallFunction (this is abstract base now and
nutkWallFunction is the same as previous nutWallFunction)
 2018-06-19 15:40:23 +02:00
Vuko Vukcevic
3de5d66021 Compilation bugfixes: 
1. Forgot to define typeName and debug level for
   nutWallFunctionFvPatchScalarField and mutWallFunctionFvPatchScalarField
2. Forgot to remove declaration of write(Ostream&) member function in
   nutSpalartAllmarasWallFunction and mutSpalartAllmarasWallFunction
 2018-06-19 15:38:48 +02:00
Vuko Vukcevic
4ec81f9103 Update to backwardsCompatibilityWallFunctions.C 
autoCreateMut now creates mutkWallFunction by default (instead of abstract base
class mutWallFunction)
 2018-06-19 15:22:23 +02:00
Vuko Vukcevic
306bd93e81 Removed deprecated mutRoughWallFunction 
Replaced by mutkRoughWallFunction
 2018-06-19 15:20:33 +02:00
Vuko Vukcevic
da6f48e599 Refactored remaining Spalart Allmaras mut wall functions 
1. mutSpalartAllmarasStandardWallFunction: same as mutUWallFunction
2. mutSpalartAllmarasStandardRoughWallFunction: same as mutURoughWallFunction
3. mutSpalartAllmarasWallFunction: refactored such that it derives from
   mutWallFunction
 2018-06-19 15:18:04 +02:00
Vuko Vukcevic
6681c7e1ee Added mutURoughWallFunction for compatibility with incompressible wall functions 
This BC is the same as mutSpalartAlmarasStandardRoughWallFunction. We will
refactor mutSpalartAlmarasStandardRoughWallFunction such that it derives from
this BC in order to have both backward compatibility and compatibility with
incompressible wall functions.
 2018-06-19 15:15:08 +02:00
Vuko Vukcevic
660326047d Added mutUWallFunction for compatibility with incompressible wall functions 
This BC is the same as mutSpalartAlmarasStandardWallFunction. We will refactor
mutSpalartAlmarasStandardWallFunction such that it derives from this BC in order
to have both backward compatibility and compatibility with incompressible wall
functions.
 2018-06-19 15:12:56 +02:00
Vuko Vukcevic
671ad26638 Refactored mutkRoughWallFunction according to the new interface 2018-06-19 15:09:56 +02:00
Vuko Vukcevic
3d7f902f82 Refactored nutkWallFunction according to the new interface 
mutkWallFunctionFvPatchScalarField now derives from
mutWallFunctionFvPatchScalarField
 2018-06-19 15:05:12 +02:00
Vuko Vukcevic
0726060d77 Refactored mutLowReWallFunction according to the new interface 2018-06-19 15:03:51 +02:00
Vuko Vukcevic
e7af83c8da Refactored mutWallFunctionFvPatchScalarField 
This class is now abstract base class from which all other mut wall functions
will derive. Similar organization as for nutWallFunctionFvPatchField
 2018-06-19 15:02:15 +02:00
Vuko Vukcevic
335d25ad1d Minor formatting in some nut wall functions 2018-06-19 14:55:12 +02:00
Vuko Vukcevic
003a9e9eb4 Update to backwardsCompatibilityWallFunctions.C 
autoCreateNut now creates nutkWallFunction by default (instead of abstract base
class nutWallFunction)
 2018-06-19 14:53:43 +02:00
Vuko Vukcevic
8241e75d28 Updated Make/files for refactored wall functions 2018-06-19 12:09:38 +02:00
Vuko Vukcevic
27ddb9849c Refactored nutLowReWallFunction according to the new interface 2018-06-19 12:09:14 +02:00
Vuko Vukcevic
5c16db8055 Refactored nutMEWTWallFunction according to the new interface 2018-06-19 12:06:55 +02:00
Vuko Vukcevic
a598804c79 Refactored nutCWTWallFunction according to new interface 2018-06-19 12:04:20 +02:00
Vuko Vukcevic
798d0f0a4d Refactored nutSpalartAllmarasWallFunction according to the new interface 2018-06-19 11:27:01 +02:00
Vuko Vukcevic
8612bd74d3 Removed deprecated nutRoughWallFunction 
Replaced by nutkRoughWallFunction
 2018-06-19 11:23:53 +02:00
Vuko Vukcevic
7bc178f100 Refactored nutSpalartAllmarasStandardRoughWallFunction 
This wall function is now the same as nutURoughWallFunction, we simply derive
from it to enable backward compatibility.
 2018-06-19 11:22:57 +02:00
Vuko Vukcevic
b31f23321a Refactored nutSpalartAllmarasStandardWallFunction 
This wall function is now the same as nutUWallFunction, we simply derive from it
to enable backward compatibility.
 2018-06-19 11:21:28 +02:00
Vuko Vukcevic
68d275b2b8 Backported nutURoughWallFunction from Vanilla 
This BC is the same as nutSpalartAllmarasStandardRoughWallFunction. We will
refactor nutSpalartAllmarasStandardRoughWallFunction such that it derives from
this BC in order to have both backward compatibility and compatibility with
Vanilla.
 2018-06-19 11:17:37 +02:00
Vuko Vukcevic
0c17c8057e Refactored nutkRoughWallFunction according to Vanilla 
Derives from nutkWallFunctionFvPatchScalarField
 2018-06-19 11:15:00 +02:00
Vuko Vukcevic
c4db345abe Backported nutUWallFunction from Vanilla 
This BC is the same as nutSpalartAlmarasStandardWallFunction. We will refactor
nutSpalartAlmarasStandardWallFunction such that it derives from this BC in order
to have both backward compatibility and compatibility with Vanilla.
 2018-06-19 11:10:32 +02:00
Vuko Vukcevic
f78472f100 Refactored nutkWallFunction according to Vanilla 
nutkWallFunctionFvPatchScalarField now derives from
nutWallFunctionFvPatchScalarField
 2018-06-19 11:07:06 +02:00
Vuko Vukcevic
ae91f480ce Refactored nutWallFunction according to Vanilla 
nutWallFunctionFvPatchScalarField is now an abstract base class (no default
behaviour)
 2018-06-19 11:01:36 +02:00
Vuko Vukcevic
2b6f07eb43 Minor formatting in sixDOFODE class 2018-06-19 07:49:20 +02:00
Vuko Vukcevic
cee5c3e681 Added acceleration access function to sixDOFODE interface 
1. Translational acceleration in absolute coordinate system (A)
2. Rotational acceleration in relative coordinate system (OmegaDot)
 2018-06-19 07:45:18 +02:00