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Merge commit '9fbf8f1bfce0b178d61be485fac02007bf9c8b77' into geometricImmersedBoundary

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This commit is contained in:
Hrvoje Jasak 2017-12-30 09:37:29 +00:00
commit e83fcedb06
325 changed files with 25684 additions and 429 deletions
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3
.gitattributes vendored Normal file
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@ -0,0 +1,3 @@
*.H gitlab-language=cpp
*.C gitlab-language=cpp

38
ThirdParty/rpmBuild/SOURCES/ParMGridGen-1.0.patch vendored
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@ -1,6 +1,31 @@
diff -ruN ParMGridGen-1.0_orig/Makefile ParMGridGen-1.0/Makefile
--- ParMGridGen-1.0_orig/Makefile 2017-04-04 15:02:44.020713666 +0200
+++ ParMGridGen-1.0/Makefile 2017-04-04 15:21:48.582647336 +0200
@@ -1,16 +1,21 @@
default:
+ (mkdir bin)
(cd MGridGen ; make)
serial:
+ (mkdir bin)
(cd MGridGen ; make)
parallel:
+ (mkdir bin)
(cd MGridGen ; make)
(cd ParMGridGen ; make)
clean:
+ (mkdir bin)
(cd MGridGen ; make clean)
(cd ParMGridGen ; make clean )
realclean:
+ (mkdir bin)
(cd MGridGen ; make realclean )
(cd ParMGridGen ; make realclean )
diff -ruN ParMGridGen-1.0_orig/Makefile.in ParMGridGen-1.0/Makefile.in
--- ParMGridGen-1.0_orig/Makefile.in 2001-12-04 16:30:33.000000000 -0800
+++ ParMGridGen-1.0/Makefile.in 2013-08-22 20:07:33.491171127 -0700
--- ParMGridGen-1.0_orig/Makefile.in 2017-04-04 15:02:44.012713543 +0200
+++ ParMGridGen-1.0/Makefile.in 2017-04-04 15:06:00.159742074 +0200
@@ -1,6 +1,6 @@
#--------------------------------------------------------------------------
# Which make to use
@ -18,6 +43,15 @@ diff -ruN ParMGridGen-1.0_orig/Makefile.in ParMGridGen-1.0/Makefile.in
# Which loader to use
LD = cc
@@ -22,7 +22,7 @@
LDOPTIONS = -O3
# Where to put the executable
-BINDIR = ../..
+BINDIR = ../../bin
# Additional libraries
DMALLOCDIR = /usr/local
@@ -33,22 +33,25 @@
# In which directories to look for any additional libraries

38
ThirdParty/rpmBuild/SOURCES/ParMGridGen-1.0.patch_darwin vendored
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@ -79,8 +79,8 @@ diff -ruN ParMGridGen-1.0_orig/MGridGen/Programs/Makefile ParMGridGen-1.0/MGridG
ifeq ($(ddmalloc),yes)
DEBUGFLAGS := $(DEBUGFLAGS) -DDMALLOC -DDEBUG
diff -ruN ParMGridGen-1.0_orig/Makefile.in ParMGridGen-1.0/Makefile.in
--- ParMGridGen-1.0_orig/Makefile.in 2011-12-24 13:54:44.000000000 -0500
+++ ParMGridGen-1.0/Makefile.in 2011-12-24 13:49:26.000000000 -0500
--- ParMGridGen-1.0_orig/Makefile.in 2001-12-05 01:30:33.000000000 +0100
+++ ParMGridGen-1.0/Makefile.in 2017-04-04 15:36:04.695980033 +0200
@@ -1,6 +1,6 @@
#--------------------------------------------------------------------------
# Which make to use
@ -98,6 +98,15 @@ diff -ruN ParMGridGen-1.0_orig/Makefile.in ParMGridGen-1.0/Makefile.in
# Which loader to use
LD = cc
@@ -22,7 +22,7 @@
LDOPTIONS = -O3
# Where to put the executable
-BINDIR = ../..
+BINDIR = ../../bin
# Additional libraries
DMALLOCDIR = /usr/local
@@ -33,22 +33,25 @@
# In which directories to look for any additional libraries
@ -129,3 +138,28 @@ diff -ruN ParMGridGen-1.0_orig/Makefile.in ParMGridGen-1.0/Makefile.in
#--------------------------------------------------------------------------
#
diff -ruN ParMGridGen-1.0_orig/Makefile ParMGridGen-1.0/Makefile
--- ParMGridGen-1.0_orig/Makefile 2001-11-09 00:41:22.000000000 +0100
+++ ParMGridGen-1.0/Makefile 2017-04-04 14:51:04.033914737 +0200
@@ -1,16 +1,21 @@
default:
+ (mkdir bin)
(cd MGridGen ; make)
serial:
+ (mkdir bin)
(cd MGridGen ; make)
parallel:
+ (mkdir bin)
(cd MGridGen ; make)
(cd ParMGridGen ; make)
clean:
+ (mkdir bin)
(cd MGridGen ; make clean)
(cd ParMGridGen ; make clean )
realclean:
+ (mkdir bin)
(cd MGridGen ; make realclean )
(cd ParMGridGen ; make realclean )

12
ThirdParty/rpmBuild/SOURCES/ParaView-4.4.0.patch_darwin vendored Normal file
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@ -0,0 +1,12 @@
diff -ruN ParaView-4.3.1_orig/Applications/ParaView-4.3.1_extra_install_Darwin.cmake ParaView-4.3.1/Applications/ParaView-4.3.1_extra_install_Darwin.cmake
--- ParaView-4.3.1_orig/Applications/ParaView-4.3.1_extra_install_Darwin.cmake 1969-12-31 19:00:00.000000000 -0500
+++ ParaView-4.3.1/Applications/ParaView-4.3.1_extra_install_Darwin.cmake 2013-10-02 19:00:00.000000000 -0400
@@ -0,0 +1,8 @@
+#
+# Additional install rules for Mac OS X platforms
+#
+INSTALL (DIRECTORY buildObj/bin/paraview.app
+ DESTINATION ${CMAKE_INSTALL_PREFIX}/bin
+ USE_SOURCE_PERMISSIONS
+ COMPONENT Runtime)
+

16
ThirdParty/rpmBuild/SOURCES/libccmio-2.6.1.patch_0 vendored
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@ -1,13 +1,13 @@
diff -ruN libccmio-2.6.1_orig/config/config.gnu.to.star libccmio-2.6.1/config/config.gnu.to.star
--- libccmio-2.6.1_orig/config/config.gnu.to.star 2007-12-17 18:32:03.000000000 -0500
+++ libccmio-2.6.1/config/config.gnu.to.star 2010-12-18 14:50:35.000000000 -0500
--- libccmio-2.6.1_orig/config/config.gnu.to.star 2007-12-18 00:32:03.000000000 +0100
+++ libccmio-2.6.1/config/config.gnu.to.star 2017-04-04 13:41:35.000000000 +0200
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
# $Id: config.gnu.to.star,v 1.4 2006/06/05 21:12:16 geoffp Exp $
@@ -34,6 +34,12 @@
@@ -34,6 +34,13 @@
x86_64-unknown-linux-gnu-null) echo linux64_2.4-x86-glibc_2.2.5 ;;
ppc64-unknown-linux-gnu-null) echo linux64_2.6-pwr4-glibc_2.3.3 ;;
i386-apple-darwin8-null) echo i386-apple-darwin8 ;;
@ -17,6 +17,7 @@ diff -ruN libccmio-2.6.1_orig/config/config.gnu.to.star libccmio-2.6.1/config/co
+ i386-apple-darwin13-null) echo i386-apple-darwin13 ;;
+ i386-apple-darwin14-null) echo i386-apple-darwin14 ;;
+ i386-apple-darwin15-null) echo i386-apple-darwin15 ;;
+ i386-apple-darwin16-null) echo i386-apple-darwin16 ;;
*) echo unknown ;;
esac
@ -30,15 +31,15 @@ diff -ruN libccmio-2.6.1_orig/config/config.guess libccmio-2.6.1/config/config.g
# Copyright (C) 1992, 1993, 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001
# Free Software Foundation, Inc.
diff -ruN libccmio-2.6.1_orig/config/config.system libccmio-2.6.1/config/config.system
--- libccmio-2.6.1_orig/config/config.system 2008-02-25 22:07:16.000000000 -0500
+++ libccmio-2.6.1/config/config.system 2010-12-18 14:51:34.000000000 -0500
--- libccmio-2.6.1_orig/config/config.system 2008-02-26 04:07:16.000000000 +0100
+++ libccmio-2.6.1/config/config.system 2017-04-04 13:42:15.000000000 +0200
@@ -1,4 +1,4 @@
-#! /bin/sh
+#! /bin/bash
# $Id: config.system,v 1.2 2005/09/29 22:19:19 geoffp Exp $
@@ -87,6 +87,27 @@
@@ -87,6 +87,30 @@
i386-apple-darwin8.11.1)
echo i386-apple-darwin8 ;;
@ -62,6 +63,9 @@ diff -ruN libccmio-2.6.1_orig/config/config.system libccmio-2.6.1/config/config.
+
+ i386-apple-darwin15.* )
+ echo i386-apple-darwin15 ;;
+
+ i386-apple-darwin16.* )
+ echo i386-apple-darwin16 ;;
+
*)
echo unknown

1343
ThirdParty/rpmBuild/SOURCES/mesquite-2.1.2_patch1 vendored Normal file
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File diff suppressed because it is too large Load diff

1
ThirdParty/rpmBuild/SPECS/libccmio-2.6.1.spec vendored
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@ -105,6 +105,7 @@ Patch0: libccmio-2.6.1.patch_0
[ ! -d config/i386-apple-darwin13 ] && cp -r config/i386-apple-darwin8 config/i386-apple-darwin13
[ ! -d config/i386-apple-darwin14 ] && cp -r config/i386-apple-darwin8 config/i386-apple-darwin14
[ ! -d config/i386-apple-darwin15 ] && cp -r config/i386-apple-darwin8 config/i386-apple-darwin15
[ ! -d config/i386-apple-darwin16 ] && cp -r config/i386-apple-darwin8 config/i386-apple-darwin16
%endif
# Warning:
# 1: The name of the ADF library will be renamed to libadf_ccmio since this

2
ThirdParty/rpmBuild/SPECS/mesquite-2.1.2.spec vendored
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@ -80,6 +80,7 @@ Source: %url/%{name}-%{version}.tar.gz
Prefix: %{_prefix}
Group: Development/Tools
Patch0: mesquite-2.1.2_patch0
Patch1: mesquite-2.1.2_patch1
%define _installPrefix %{_prefix}/packages/%{name}-%{version}/platforms/%{_WM_OPTIONS}
@ -90,6 +91,7 @@ Patch0: mesquite-2.1.2_patch0
%setup -q
%patch0 -p1
%patch1 -p1
%build
# export WM settings in a form that GNU configure recognizes

16
applications/solvers/basic/sixDOFSolver/sixDOFSolver.C
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@ -36,7 +36,7 @@ Description
#include "objectRegistry.H"
#include "foamTime.H"
#include "ODESolver.H"
#include "sixDOFbodies.H"
#include "sixDOFBodies.H"
#include "OFstream.H"
using namespace Foam;
@ -48,9 +48,12 @@ int main(int argc, char *argv[])
# include "setRootCase.H"
# include "createTime.H"
sixDOFbodies structure(runTime);
sixDOFBodies structure(runTime);
OFstream of(runTime.path()/"motion.dat");
// Write header for output file
of << "# Time, CoG_x, CoG_y, CoG_z, omega_x, omega_y, omega_z" << endl;
Info<< "\nStarting time loop\n" << endl;
for (runTime++; !runTime.end(); runTime++)
@ -73,11 +76,14 @@ int main(int argc, char *argv[])
<< structure()[bodyI].omegaAverage().value() << nl
<< "Current omega in time instant = "
<< structure()[bodyI].omega().value() << nl
<< "Average omegaAbs in time step = "
<< structure()[bodyI].omegaAverageAbsolute().value() << nl
<< endl;
of << structure()[bodyI].X().value().x() << tab;
of << structure()[bodyI].X().value().x() << tab
<< structure()[bodyI].X().value().y() << tab
<< structure()[bodyI].X().value().z() << tab
<< structure()[bodyI].omega().value().x() << tab
<< structure()[bodyI].omega().value().y() << tab
<< structure()[bodyI].omega().value().z() << tab;
}
of << endl;

3
applications/solvers/incompressible/RichardsFoam/Make/files Executable file
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@ -0,0 +1,3 @@
RichardsFoam.C
EXE = $(FOAM_USER_APPBIN)/RichardsFoam

5
applications/solvers/incompressible/RichardsFoam/Make/options Executable file
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@ -0,0 +1,5 @@
EXE_INC = \
-I$(LIB_SRC)/finiteVolume/lnInclude
EXE_LIBS = \
-lfiniteVolume

145
applications/solvers/incompressible/RichardsFoam/RichardsFoam.C Normal file
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@ -0,0 +1,145 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2010 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
Application
RichardsFoam
Description
Transient solver for flow in unsaturated porous media
With chord slope formulation of the Richards equation.
van Genuchten laws for unsaturated hydraulic properties parametrisation
Global computation of the convergence criterium
Adaptative time stepping with a stabilisation procedure
NB 1: use backward scheme for time discretisation
NB 2: use only mesh with constant cell volumes
References
version 0.0 (develloped with OpenFOAM 2.0.1)
Details may be found in:
Orgogozo, L., Renon, N., Soulaine, C., Hénon, F., Tomer, S.K., Labat, D.,
Pokrovsky, O.S., Sekhar, M., Ababou, R., Quintard, M., Submitted.
Mechanistic modelling of water fluxes at the watershed scale: An open source
massively parallel solver for Richards equation.
Submitted to Computer Physics Communications.
\*---------------------------------------------------------------------------*/
#include "fvCFD.H"
#include "pimpleControl.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
int main(int argc, char *argv[])
{
# include "setRootCase.H"
# include "createTime.H"
# include "createMesh.H"
// pimpleControl pimple(mesh);
# include "readPicardControls.H"
# include "createFields.H"
# include "initContinuityErrs.H"
# include "createTimeControls.H"
Info<< "\nStarting time loop\n" << endl;
// starting of the time loop.
while (runTime.loop())
{
// time step control operations.
# include "readTimeControls.H"
# include "setDeltaT.H"
// runTime++;
Info<< "Time = " << runTime.timeName() << nl << endl;
// Beginning of the stabilisation loop for the stabilised adaptive time
// step procedure.
for (int cyc = 0; cyc < nMaxCycle; cyc++)
{
// Beginning of the Picard loop.
for (int pic = 0; pic < nIterPicard; pic++)
{
# include "psiEqn.H"
}
// Exit test for the loop associated with the stabilisation cycles
// for the adaptive time step procedure.
if (crit < precPicard)
{
break;
}
else
{
Info << "Criterion not reached, restart time loop iteration"
<< "with a smaller time step / Error = " << crit
<< nl << endl;
runTime.setDeltaT((1/tFact)*runTime.deltaTValue());
Info<< "deltaT = " << runTime.deltaTValue() << endl;
}
// End of the stabilisation cycles loop.
}
// Warning test in case of convergence failure of the Picard loop.
if (crit >= precPicard)
{
Info<< "Convergence failure / Error = " << crit << nl << endl;
currentPicard = nIterPicard;
}
// Final updating of the result fields before going to the next time
// iteration.
psi_tmp = psi;
thtil_tmp = 0.5*
(
(1 + sign(psi_tmp)) + (1 - sign(psi_tmp))*
pow((1 + pow(mag(alpha*psi_tmp),n)), - (1 - (1/n)))
);
theta = (thetas - thetar)*thtil + thetar;
U = - Krel*((fvc::grad(psi)) + vuz);
// Writting of the result.
runTime.write();
Info<< "ExecutionTime = " << runTime.elapsedCpuTime() << " s"
<< " ClockTime = " << runTime.elapsedClockTime() << " s"
<< nl << endl;
// end of the time loop.
}
Info<< "End\n" << endl;
return 0;
}
// ************************************************************************* //

209
applications/solvers/incompressible/RichardsFoam/createFields.H Normal file
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@ -0,0 +1,209 @@
Info<< "Reading transportProperties\n" << endl;
// reading of the physical constant associated with the considered problem.
// Localisation of the data within the considered case:
// constant/transportProperties
IOdictionary transportProperties
(
IOobject
(
"transportProperties",
runTime.constant(),
mesh,
IOobject::MUST_READ,
IOobject::NO_WRITE
)
);
dimensionedScalar K
(
transportProperties.lookup("K")
);
dimensionedScalar alpha
(
transportProperties.lookup("alpha")
);
dimensionedScalar thetas
(
transportProperties.lookup("thetas")
);
dimensionedScalar thetar
(
transportProperties.lookup("thetar")
);
dimensionedScalar n
(
transportProperties.lookup("n")
);
dimensionedScalar C
(
transportProperties.lookup("C")
);
dimensionedScalar S
(
transportProperties.lookup("S")
);
// declaration of the variable and results fields
// Water velocity field [m/s]
Info<< "Reading field U\n" << endl;
volVectorField U
(
IOobject
(
"U",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
// Water saturation field [-]
Info<< "Reading field theta\n" << endl;
volScalarField theta
(
IOobject
(
"theta",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
// Water pressure field [m] - field of resolution.
Info<< "Reading field psi\n" << endl;
volScalarField psi
(
IOobject
(
"psi",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
// Field of residuals for the Picard loop [m].
Info<< "Reading field err\n" << endl;
volScalarField err
(
IOobject
(
"err",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
// Dimensionned unit scalar field [m].
Info<< "Reading field vuz\n" << endl;
volVectorField vuz
(
IOobject
(
"vuz",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
// Dimensionless unit vertical upward vector field.
Info<< "Reading field usf\n" << endl;
volScalarField usf
(
IOobject
(
"usf",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);
# include "createPhi.H"
// Initialisation of the scalar containing the number of mesh cells. Note the
// use of gSum instead of sum.
double nbMesh;
nbMesh = gSum(usf);
// Initialisation of the scalar containing the residual for the exit test of the
// Picard loop.
double crit;
crit=0.;
// Initialisation of the token which counts the number of Picard iteraion for
// the adaptive time step procedure.
int currentPicard;
currentPicard = nIterPicard-3;
// Initialisation of the token which counts the number of Stabilisation cycle
// for the stabilisation of the adaptive time step procedure.
int sc;
sc = 0;
// Initialisation of the field of altitudes.
volVectorField positionVector = mesh.C();
volScalarField z = positionVector.component(vector::Z);
// Initialisation of the intermediate fields for the Picard loop.
volScalarField psi_tmp = psi;
volScalarField psim1 = psi;
// Initialisation of the varying transport properties for the Picard loop.
volScalarField thtil =
0.5*
(
(1 + sign(psi)) + (1 - sign(psi))*
pow((1 + pow(mag(alpha*psi),n)), - (1 - (1/n)))
);
volScalarField thtil_tmp =
0.5*
(
(1 + sign(psi_tmp)) + (1-sign(psi_tmp))*
pow((1 + pow(mag(alpha*psi_tmp),n)), - (1 - (1/n)))
);
volScalarField Krel =
0.5*
(
(1 + sign(psi))*K + (1 - sign(psi))*K*pow(thtil,0.5)*
pow((1 - pow((1 - pow(thtil,(n/(n - 1)))),(1 - (1/n)))),2)
);
volScalarField Crel =
S + 0.5*
(
(1 - sign(psi))*((thetas - thetar)*(thtil - thtil_tmp)*
(1./((usf*pos(psi - psi_tmp)*pos(psi_tmp - psi)) + psi - psi_tmp)))
);
// Initialisation of the gravity term.
volVectorField gradk = fvc::grad(Krel);
volScalarField gradkz = gradk.component(vector::Z);
// Initialisation of the velocity field.
U = - Krel*((fvc::grad(psi)) + vuz);

60
applications/solvers/incompressible/RichardsFoam/psiEqn.H Normal file
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@ -0,0 +1,60 @@
psim1 = psi;
psi = psi_tmp;
// Resolution of the linear system.
fvScalarMatrix psiEqn
(
Crel*fvm::ddt(psi)
==
fvm::laplacian(Krel, psi, "laplacian(Krel,psi)")
+ gradkz
);
psiEqn.relax();
psiEqn.solve();
// Update of the varying transport properties.
thtil = 0.5*
(
(1 + sign(psi)) + (1 - sign(psi))*
pow((1+pow(mag(alpha*psi),n)),-(1-(1/n)))
);
Krel = 0.5*
(
(1 + sign(psi))*K + (1 - sign(psi))*K*pow(thtil, 0.5)*
pow((1 - pow((1 - pow(thtil, (n/(n - 1)))),(1 - (1/n)))), 2)
);
Crel= S + 0.5*
(
(1 - sign(psi))*
(
(thetas - thetar)*(thtil - thtil_tmp)*
(
1./((usf*pos(psi - psi_tmp)*pos(psi_tmp - psi))
+ psi - psi_tmp)
)
)
);
// Update of the gravity term.
gradk = fvc::grad(Krel);
gradkz = gradk.component(2);
// Computation of the field of residuals for the exit test of
// the Picard loop.
err = psi - psim1;
// Computation of the residual for the exit test of the Picard
// loop. Note the use of gSum instead of sum.
crit = gSumMag(err)/nbMesh;
// exit test for the Picard loop.
if (crit < precPicard)
{
Info << " Erreur = " << crit
<< " Picard = " << pic
<< nl << endl;
currentPicard=pic;
break;
}

25
applications/solvers/incompressible/RichardsFoam/readPicardControls.H Normal file
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@ -0,0 +1,25 @@
// Reading of the controling parameters of the Picard loop and of the
// Stabilisation cycles loop for the adaptive time step procedure.
// Localisation of the data within the considered case: system/fvSolution
const dictionary& picardDict = mesh.solutionDict().subDict("Picard");
// Maximum number of Picard iterations.
const int nIterPicard =
picardDict.lookupOrDefault<int>("nIterPicard", 1);
// Maximum number of stabilisation cycles.
const int nMaxCycle =
picardDict.lookupOrDefault<int>("nMaxCycle", 1);
// Number of time iterations with low number of Picard iteration beyond which
// the time step is increased.
const int stabilisationThreshold =
picardDict.lookupOrDefault<int>("stabilisationThreshold", 1);
// Exit criterion for the Picard loop.
const double precPicard =
picardDict.lookupOrDefault<double>("precPicard", 1.);
// Factor of increase/decrease of the time step.
const double tFact =
picardDict.lookupOrDefault<double>("tFact", 1.);

82
applications/solvers/incompressible/RichardsFoam/setDeltaT.H Normal file
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@ -0,0 +1,82 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 2004-2010 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
Global
setDeltaT
Description
Reset the timestep to maintain a low number of Picard iteration and a good
convergence. Reduction of time-step is immediate, but increase is damped to
avoid unstable oscillations.
\*---------------------------------------------------------------------------*/
scalar deltaTFact = 1.;
if (adjustTimeStep)
{
deltaTFact = 1.;
// If There is a too high number of Picard iteration, decrease of the time
// step.
if (currentPicard > nIterPicard-2)
{
deltaTFact = 1./tFact;
}
if (currentPicard >= 3)
{
sc = 0;
}
if ((currentPicard < 3) && (sc < stabilisationThreshold))
{
sc = sc+1;
}
// If there is more than 'stabilisationThreshold' iteration that the number
// of Picard iteration is low, increase of the time step.
if ((currentPicard < 3) && (sc == stabilisationThreshold))
{
deltaTFact = tFact;
sc = 0;
}
// Reset of the time step if needed (time step is always lower than
// 'maxDeltaT').
if (deltaTFact != 1.)
{
runTime.setDeltaT
(
min
(
deltaTFact*runTime.deltaTValue(),
maxDeltaT
)
);
}
Info<< "deltaT = " << runTime.deltaTValue() << endl;
}
// ************************************************************************* //

3
applications/solvers/incompressible/RichardsFoam/spatialMeanValueRichardsonFoam/Make/files Executable file
View file

@ -0,0 +1,3 @@
spatialMeanValueRichardsonFoam.C
EXE = $(FOAM_USER_APPBIN)/spatialMeanValueRichardsonFoam

5
applications/solvers/incompressible/RichardsFoam/spatialMeanValueRichardsonFoam/Make/options Executable file
View file

@ -0,0 +1,5 @@
EXE_INC = \
-I$(LIB_SRC)/finiteVolume/lnInclude
EXE_LIBS = \
-lfiniteVolume

110
applications/solvers/incompressible/RichardsFoam/spatialMeanValueRichardsonFoam/spatialMeanValueRichardsonFoam.C Normal file
View file

@ -0,0 +1,110 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright (C) 1991-2010 OpenCFD Ltd.
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM. If not, see <http://www.gnu.org/licenses/>.
Application
spatialMeanValue
Description
Calculates the spatial mean of the specified volScalarField over the
whole domain (for regular grid).
\*---------------------------------------------------------------------------*/
#include "fvCFD.H"
#include "cyclicPolyPatch.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
// Main program:
int main(int argc, char *argv[])
{
# include "addRegionOption.H"
timeSelector::addOptions();
argList::validArgs.append("fieldName");
# include "setRootCase.H"
# include "createTime.H"
instantList timeDirs = timeSelector::select0(runTime, args);
# include "createNamedMesh.H"
word fieldName(args.additionalArgs()[0]);
Info << "Calculating avarage pressure heads:" << endl;
forAll(timeDirs, timeI)
{
runTime.setTime(timeDirs[timeI], timeI);
IOobject fieldHeader
(
fieldName,
runTime.timeName(),
mesh,
IOobject::MUST_READ
);
// Check field exists
if (fieldHeader.headerOk())
{
mesh.readUpdate();
// Read field and calc mean, for regular grid
if (fieldHeader.headerClassName() == volScalarField::typeName)
{
volScalarField field(fieldHeader, mesh);
int nbMesh;
nbMesh = 0;
forAll(field, cellI)
{
nbMesh++;
}
Info<< runTime.timeName()<< " "
<< sum(field).value()/nbMesh<< " "
<< endl;
}
else
{
FatalError
<< "Only possible for volScalarField "<< "s "
<< nl << exit(FatalError);
}
}
else
{
Info<< " No field " << fieldName << endl;
}
}
Info<< "End\n" << endl;
return 0;
}
// ************************************************************************* //

3
applications/utilities/mesh/advanced/runDynamicMesh/Make/files Normal file
View file

@ -0,0 +1,3 @@
runDynamicMesh.C
EXE = $(FOAM_APPBIN)/runDynamicMesh

12
applications/utilities/mesh/advanced/runDynamicMesh/Make/options Normal file
View file

@ -0,0 +1,12 @@
EXE_INC = \
-I$(LIB_SRC)/dynamicMesh/dynamicFvMesh/lnInclude \
-I$(LIB_SRC)/dynamicMesh/dynamicMesh/lnInclude \
-I$(LIB_SRC)/meshTools/lnInclude \
-I$(LIB_SRC)/finiteVolume/lnInclude
EXE_LIBS = \
-ldynamicFvMesh \
-ldynamicMesh \
-lmeshTools \
-lfiniteVolume \
-L$(MESQUITE_LIB_DIR) -lmesquite

13
applications/utilities/mesh/advanced/runDynamicMesh/createFields.H Normal file
View file

@ -0,0 +1,13 @@
Info<< "Reading field alpha\n" << endl;
volScalarField alpha
(
IOobject
(
"alpha",
runTime.timeName(),
mesh,
IOobject::MUST_READ,
IOobject::AUTO_WRITE
),
mesh
);

80
applications/utilities/mesh/advanced/runDynamicMesh/runDynamicMesh.C Normal file
View file

@ -0,0 +1,80 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Application
runDynamicMesh
Description
Creates dynamicFvMesh and updates it in a time loop. Reads indicator field
alpha used for dynamic mesh refinement to trigger refinement in certain
areas.
Author
Vuko Vukcevic, Wikki Ltd. All rights reserved.
\*---------------------------------------------------------------------------*/
#include "fvCFD.H"
#include "dynamicFvMesh.H"
#include "simpleControl.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
int main(int argc, char *argv[])
{
# include "setRootCase.H"
# include "createTime.H"
# include "createDynamicFvMesh.H"
simpleControl simple(mesh);
# include "createFields.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Info<< "\nStarting time loop\n" << endl;
while (simple.loop())
{
Info<< "Time = " << runTime.timeName() << nl << endl;
bool meshChanged = mesh.update();
// Write only if mesh has changed
if (meshChanged)
{
runTime.write();
}
Info<< "ExecutionTime = " << runTime.elapsedCpuTime() << " s"
<< " ClockTime = " << runTime.elapsedClockTime() << " s"
<< nl << endl;
}
Info<< "End\n" << endl;
return(0);
}
// ************************************************************************* //

1
applications/utilities/mesh/conversion/star4ToFoam/cellZoneToCellTableId/cellZoneToCellTableId.C
View file

@ -27,6 +27,7 @@ Description
\*---------------------------------------------------------------------------*/
#include "argList.H"
#include "objectRegistry.H"
#include "foamTime.H"
#include "volFields.H"
#include "OFstream.H"

1
applications/utilities/mesh/conversion/star4ToFoam/foamMeshToStar/foamMeshToStar.C
View file

@ -35,6 +35,7 @@ Description
\*---------------------------------------------------------------------------*/
#include "argList.H"
#include "objectRegistry.H"
#include "foamTime.H"
#include "volFields.H"
#include "cellModeller.H"

1
applications/utilities/mesh/generation/extrudeMesh/extrudeModel/Make/files
View file

@ -4,6 +4,7 @@ linearNormal/linearNormal.C
linearRadial/linearRadial.C
sigmaRadial/sigmaRadial.C
wedge/wedge.C
gradedNormal/gradedNormal.C
LIB = $(FOAM_LIBBIN)/libextrudeModel

7
applications/utilities/mesh/generation/extrudeMesh/extrudeModel/Make/options
View file

@ -1,8 +1,9 @@
EXE_INC = \
-I$(LIB_SRC)/meshTools/lnInclude \
-I$(LIB_SRC)/dynamicMesh/lnInclude
-I$(LIB_SRC)/dynamicMesh/lnInclude \
-I$(LIB_SRC)/ODE/lnInclude
EXE_LIBS = \
-lmeshTools \
-ldynamicMesh
-ldynamicMesh \
-lODE

143
applications/utilities/mesh/generation/extrudeMesh/extrudeModel/gradedNormal/gradedNormal.C Normal file
View file

@ -0,0 +1,143 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "gradedNormal.H"
#include "addToRunTimeSelectionTable.H"
#include "BisectionRoot.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
namespace extrudeModels
{
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
defineTypeNameAndDebug(gradedNormal, 0);
addToRunTimeSelectionTable(extrudeModel, gradedNormal, dictionary);
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
gradedNormal::gradedNormal(const dictionary& dict)
:
extrudeModel(typeName, dict),
thickness_(readScalar(coeffDict_.lookup("thickness"))),
delta0_(readScalar(coeffDict_.lookup("initialCellLength"))),
expansionFactor_(1.0)
{
// Sanity checks
if (thickness_ <= SMALL)
{
FatalErrorIn("gradedNormal(const dictionary&)")
<< "thickness should be positive: " << thickness_
<< exit(FatalError);
}
if (delta0_ <= SMALL)
{
FatalErrorIn("gradedNormal(const dictionary&)")
<< "initialCellLength should be positive: " << delta0_
<< exit(FatalError);
}
const scalar maxExpFactor =
coeffDict_.lookupOrDefault<scalar>("maxExpansionFactor", 3.0);
if (maxExpFactor <= SMALL)
{
FatalErrorIn("gradedNormal(const dictionary&)")
<< "maxExpansionFactor should be positive: " << maxExpFactor
<< exit(FatalError);
}
const scalar bisectionTol =
coeffDict_.lookupOrDefault<scalar>("bisectionTol", 1e-5);
if (bisectionTol <= SMALL)
{
FatalErrorIn("gradedNormal(const dictionary&)")
<< "bisectionTolerance should be positive: " << bisectionTol
<< exit(FatalError);
}
// Create expansion factor equation represented as a function object
expansionFactorEqn eqn(*this);
// Calculate the expansionFactor using the bisection algorithm with the
// default tolerance of 1e-5
BisectionRoot<expansionFactorEqn> rootFinder
(
eqn,
bisectionTol
);
// Search for the root in [0, 3], where upper bound 3 is default
expansionFactor_ = rootFinder.root
(
0.0,
maxExpFactor
);
// Report the result
Info<< "Calculated expansion factor: " << expansionFactor_ << endl;
}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
gradedNormal::~gradedNormal()
{}
// * * * * * * * * * * * * * * * * Operators * * * * * * * * * * * * * * * * //
point gradedNormal::operator()
(
const point& surfacePoint,
const vector& surfaceNormal,
const label layer
) const
{
scalar d = 0.0;
for (label i = 0; i < layer; ++i)
{
d += delta0_*pow(expansionFactor_, i);
}
return surfacePoint + d*surfaceNormal;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace extrudeModels
} // End namespace Foam
// ************************************************************************* //

158
applications/utilities/mesh/generation/extrudeMesh/extrudeModel/gradedNormal/gradedNormal.H Normal file
View file

@ -0,0 +1,158 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::extrudeModels::gradedNormal
Description
Extrudes by transforming points normal to the surface. Input parameters are:
1. Extrusion thickness (in meters),
2. Initial delta (in meters),
3. Number of layers.
Expansion factor is calculated numerically using bisection algorithm.
Author
Vuko Vukcevic. FMENA Zagreb. All rights reserved.
\*---------------------------------------------------------------------------*/
#ifndef gradedNormal_H
#define gradedNormal_H
#include "point.H"
#include "extrudeModel.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
namespace extrudeModels
{
/*---------------------------------------------------------------------------*\
Class gradedNormal Declaration
\*---------------------------------------------------------------------------*/
class gradedNormal
:
public extrudeModel
{
// Private data
//- Layer thickness
scalar thickness_;
//- Initial delta (cell size at the extruded patch)
scalar delta0_;
//- Expansion factor
scalar expansionFactor_;
// Expansion factor equation (functor class used by BisectionRoot)
class expansionFactorEqn
{
// Private data
//- Const reference to underlying gradedNormal model
const gradedNormal& gnm_;
public:
//- Construct given gradedNormal model
explicit expansionFactorEqn(const gradedNormal& gnm)
:
gnm_(gnm)
{}
//- Function call operator
scalar operator()(const scalar& x) const
{
scalar result = gnm_.thickness();
for (label i = 0; i <= gnm_.nLayers(); ++i)
{
result -= gnm_.delta0()*pow(x, i);
}
return result;
}
};
public:
//- Runtime type information
TypeName("gradedNormal");
// Constructors
//- Construct from components
gradedNormal(const dictionary& dict);
//- Destructor
~gradedNormal();
// Access functions
//- Return const reference to thickness
const scalar& thickness() const
{
return thickness_;
}
//- Return const reference to initial delta
const scalar& delta0() const
{
return delta0_;
}
// Member Operators
point operator()
(
const point& surfacePoint,
const vector& surfaceNormal,
const label layer
) const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace extrudeModels
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

2
applications/utilities/mesh/manipulation/setSet/setSet.C
View file

@ -894,7 +894,7 @@ int main(int argc, char *argv[])
Info<< "\nEnd\n" << endl;
return 0;
return !ok;
}

8
applications/utilities/mesh/manipulation/splitMeshRegions/splitMeshRegions.C
View file

@ -660,7 +660,8 @@ autoPtr<mapPolyMesh> createRegionMesh
const EdgeMap<label>& interfaceToPatch,
const fvMesh& mesh,
const label regionI,
const word& regionName
const word& regionName,
const word& newMeshInstance
)
{
// Neighbour cellRegion.
@ -758,7 +759,7 @@ autoPtr<mapPolyMesh> createRegionMesh
IOobject
(
regionName,
mesh.time().timeName(),
newMeshInstance,
mesh.time(),
IOobject::NO_READ,
IOobject::AUTO_WRITE
@ -977,7 +978,8 @@ void createAndWriteRegion
interfaceToPatch,
mesh,
regionI,
regionNames[regionI]
regionNames[regionI],
newMeshInstance
);
// Read in mesh as fvMesh for mapping. HJ, 19/May/2011

17
applications/utilities/parallelProcessing/decomposePar/decomposePar.C
View file

@ -284,6 +284,7 @@ int main(int argc, char *argv[])
(
"cellDist",
runTime.timeName(),
mesh.dbDir(),
mesh,
IOobject::NO_READ,
IOobject::NO_WRITE
@ -914,7 +915,7 @@ int main(int argc, char *argv[])
"faBoundary",
mesh.time().findInstance
(
mesh.dbDir()/polyMesh::meshSubDir,
mesh.meshDir(),
"boundary"
),
faMesh::meshSubDir,
@ -989,12 +990,20 @@ int main(int argc, char *argv[])
faMesh procMesh(procFvMesh);
word faceLabelsInstance =
procMesh.time().findInstance
(
procMesh.meshDir(),
"faceLabels"
);
labelIOList faceProcAddressing
(
IOobject
(
"faceProcAddressing",
"constant",
faceLabelsInstance,
procMesh.meshSubDir,
procFvMesh,
IOobject::MUST_READ,
@ -1007,7 +1016,7 @@ int main(int argc, char *argv[])
IOobject
(
"boundaryProcAddressing",
"constant",
faceLabelsInstance,
procMesh.meshSubDir,
procFvMesh,
IOobject::MUST_READ,
@ -1031,7 +1040,7 @@ int main(int argc, char *argv[])
IOobject
(
"edgeProcAddressing",
"constant",
faceLabelsInstance,
procMesh.meshSubDir,
procFvMesh,
IOobject::MUST_READ,

64
applications/utilities/parallelProcessing/decomposePar/domainDecomposition.C
View file

@ -103,6 +103,37 @@ bool domainDecomposition::writeDecomposition()
label maxProcFaces = 0;
// Note: get cellLevel and pointLevel. Avoid checking whether they exist or
// not by hand. If they don't exist, simpy assume that the level is 0
const labelIOList globalCellLevel
(
IOobject
(
"cellLevel",
this->facesInstance(),
polyMesh::meshSubDir,
*this,
IOobject::READ_IF_PRESENT,
IOobject::NO_WRITE
),
labelList(nCells(), 0)
);
const labelIOList globalPointLevel
(
IOobject
(
"pointLevel",
this->facesInstance(),
polyMesh::meshSubDir,
*this,
IOobject::READ_IF_PRESENT,
IOobject::NO_WRITE
),
labelList(nPoints(), 0)
);
// Write out the meshes
for (label procI = 0; procI < nProcs_; procI++)
{
@ -615,6 +646,39 @@ bool domainDecomposition::writeDecomposition()
procBoundaryAddressing_[procI]
);
boundaryProcAddressing.write();
// Create and write cellLevel and pointLevel information
const unallocLabelList& cellMap = cellProcAddressing;
labelIOList procCellLevel
(
IOobject
(
"cellLevel",
procMesh.facesInstance(),
procMesh.meshSubDir,
procMesh,
IOobject::NO_READ,
IOobject::NO_WRITE
),
labelList(globalCellLevel, cellMap)
);
procCellLevel.write();
const unallocLabelList& pointMap = pointProcAddressing;
labelIOList procPointLevel
(
IOobject
(
"pointLevel",
procMesh.facesInstance(),
procMesh.meshSubDir,
procMesh,
IOobject::NO_READ,
IOobject::NO_WRITE
),
labelList(globalPointLevel, pointMap)
);
procPointLevel.write();
}
Info<< nl

27
applications/utilities/parallelProcessing/decomposePar/faMeshDecomposition.C
View file

@ -78,7 +78,7 @@ void faMeshDecomposition::distributeFaces()
IOobject
(
"faceProcAddressing",
"constant",
procMesh.facesInstance(),
procMesh.meshSubDir,
procMesh,
IOobject::MUST_READ,
@ -94,7 +94,7 @@ void faMeshDecomposition::distributeFaces()
IOobject
(
"owner",
"constant",
procMesh.facesInstance(),
procMesh.meshSubDir,
procMesh,
IOobject::MUST_READ,
@ -127,7 +127,7 @@ void faMeshDecomposition::distributeFaces()
IOobject
(
"faceProcAddressing",
"constant",
procMesh.facesInstance(),
procMesh.meshSubDir,
procMesh,
IOobject::MUST_READ,
@ -263,7 +263,7 @@ void faMeshDecomposition::decomposeMesh(const bool filterEmptyPatches)
IOobject
(
"pointProcAddressing",
"constant",
procFvMesh.facesInstance(),
procFvMesh.meshSubDir,
procFvMesh,
IOobject::MUST_READ,
@ -279,7 +279,7 @@ void faMeshDecomposition::decomposeMesh(const bool filterEmptyPatches)
IOobject
(
"faceProcAddressing",
"constant",
procFvMesh.facesInstance(),
procFvMesh.meshSubDir,
procFvMesh,
IOobject::MUST_READ,
@ -1202,7 +1202,7 @@ bool faMeshDecomposition::writeDecomposition()
IOobject
(
"boundaryProcAddressing",
"constant",
procFvMesh.facesInstance(),
procFvMesh.meshSubDir,
procFvMesh,
IOobject::MUST_READ,
@ -1340,13 +1340,20 @@ bool faMeshDecomposition::writeDecomposition()
maxProcPatches = max(maxProcPatches, nProcPatches);
maxProcEdges = max(maxProcEdges, nProcEdges);
word faceLabelsInstance =
procMesh.time().findInstance
(
procMesh.meshDir(),
"faceLabels"
);
// create and write the addressing information
labelIOList pointProcAddressing
(
IOobject
(
"pointProcAddressing",
"constant",
faceLabelsInstance,
procMesh.meshSubDir,
procFvMesh,
IOobject::NO_READ,
@ -1361,7 +1368,7 @@ bool faMeshDecomposition::writeDecomposition()
IOobject
(
"edgeProcAddressing",
"constant",
faceLabelsInstance,
procMesh.meshSubDir,
procFvMesh,
IOobject::NO_READ,
@ -1376,7 +1383,7 @@ bool faMeshDecomposition::writeDecomposition()
IOobject
(
"faceProcAddressing",
"constant",
faceLabelsInstance,
procMesh.meshSubDir,
procFvMesh,
IOobject::NO_READ,
@ -1391,7 +1398,7 @@ bool faMeshDecomposition::writeDecomposition()
IOobject
(
"boundaryProcAddressing",
"constant",
faceLabelsInstance,
procMesh.meshSubDir,
procFvMesh,
IOobject::NO_READ,

44
applications/utilities/parallelProcessing/decomposeSets/processorMeshes.C
View file

@ -157,6 +157,16 @@ Foam::polyMesh::readUpdateState Foam::processorMeshes::readUpdate()
// Check if any new meshes need to be read.
polyMesh::readUpdateState procStat = meshes_[procI].readUpdate();
// Force changed mesh if the processor mesh holds points. This is
// essential for changed region meshes and if the current time is
// equal to the initial time during construction.
// Pascal Beckstein, 14/Jul/2016
fileName timePath = meshes_[procI].time().timePath();
if (isFile(timePath/meshes_[procI].meshDir()/"points"))
{
procStat = polyMesh::POINTS_MOVED;
}
// Combine into overall mesh change status
if (stat == polyMesh::UNCHANGED)
{
@ -196,8 +206,36 @@ Foam::polyMesh::readUpdateState Foam::processorMeshes::readUpdate()
void Foam::processorMeshes::reconstructPoints(fvMesh& mesh)
{
// We may not use
// mesh.movePoints(newPoints);
// mesh.write();
// here, as this will fail for mesh regions containing
// directMappedPolyPatches or
// directMappedWallPolyPatches
// and probably other region-coupled patches. E.g. for both above
// mentioned directMapped patch types we have calls to
// directMappedPatchBase::map()
// in the corresponding initMovePoints(const pointField& p) member
// function. This however involves parallel communication and it would
// require all other connected regions to be already reconstructed and
// registered during reconstruction of the current region!
// Pascal Beckstein, 14/Jul/2016
// Create the new points
vectorField newPoints(mesh.nPoints());
pointIOField newPoints
(
IOobject
(
"points",
mesh.time().timeName(),
mesh.meshSubDir,
mesh,
IOobject::NO_READ,
IOobject::NO_WRITE,
false
),
mesh.allPoints()
);
forAll (meshes_, procI)
{
@ -225,8 +263,8 @@ void Foam::processorMeshes::reconstructPoints(fvMesh& mesh)
}
}
mesh.movePoints(newPoints);
mesh.write();
newPoints.write();
mesh.readUpdate();
}

44
applications/utilities/parallelProcessing/reconstructPar/processorMeshes.C
View file

@ -157,6 +157,16 @@ Foam::polyMesh::readUpdateState Foam::processorMeshes::readUpdate()
// Check if any new meshes need to be read.
polyMesh::readUpdateState procStat = meshes_[procI].readUpdate();
// Force changed mesh if the processor mesh holds points. This is
// essential for changed region meshes and if the current time is
// equal to the initial time during construction.
// Pascal Beckstein, 14/Jul/2016
fileName timePath = meshes_[procI].time().timePath();
if (isFile(timePath/meshes_[procI].meshDir()/"points"))
{
procStat = polyMesh::POINTS_MOVED;
}
// Combine into overall mesh change status
if (stat == polyMesh::UNCHANGED)
{
@ -196,8 +206,36 @@ Foam::polyMesh::readUpdateState Foam::processorMeshes::readUpdate()
void Foam::processorMeshes::reconstructPoints(fvMesh& mesh)
{
// We may not use
// mesh.movePoints(newPoints);
// mesh.write();
// here, as this will fail for mesh regions containing
// directMappedPolyPatches or
// directMappedWallPolyPatches
// and probably other region-coupled patches. E.g. for both above
// mentioned directMapped patch types we have calls to
// directMappedPatchBase::map()
// in the corresponding initMovePoints(const pointField& p) member
// function. This however involves parallel communication and it would
// require all other connected regions to be already reconstructed and
// registered during reconstruction of the current region!
// Pascal Beckstein, 14/Jul/2016
// Create the new points
vectorField newPoints(mesh.nPoints());
pointIOField newPoints
(
IOobject
(
"points",
mesh.time().timeName(),
mesh.meshSubDir,
mesh,
IOobject::NO_READ,
IOobject::NO_WRITE,
false
),
mesh.allPoints()
);
forAll (meshes_, procI)
{
@ -225,8 +263,8 @@ void Foam::processorMeshes::reconstructPoints(fvMesh& mesh)
}
}
mesh.movePoints(newPoints);
mesh.write();
newPoints.write();
mesh.readUpdate();
}

14
applications/utilities/postProcessing/dataConversion/foamToTecplot360/Allwmake
View file

@ -5,10 +5,16 @@
cd ${0%/*} || exit 1 # run from this directory
set -x
# build tecio
wmake libso tecio/tecsrc
# foamToTecplot360 will not compile on MS Windows
if [ "$WM_OSTYPE" = "MSWindows" ]
then
echo MSWindows detected. Skipping compilation of foamToTecplot360.
else
# build tecio
wmake libso tecio/tecsrc
# build converter
wmake
# build converter
wmake
fi
# ----------------------------------------------------------------- end-of-file

2
applications/utilities/postProcessing/graphics/PV4FoamReader/Allwclean
View file

@ -3,6 +3,6 @@ cd ${0%/*} || exit 1 # run from this directory
set -x
rm -rf PV4FoamReader/Make
wclean libso vtkPV4Foam
wclean vtkPV4Foam
# ----------------------------------------------------------------- end-of-file

2
applications/utilities/surface/surfaceCoarsen/Make/files
View file

@ -1,5 +1,5 @@
bunnylod/progmesh.C
bunnylod/vector.C
bunnylod/vectorb.C
surfaceCoarsen.C
EXE = $(FOAM_APPBIN)/surfaceCoarsen

2
applications/utilities/surface/surfaceCoarsen/bunnylod/bunnygut.C
View file

@ -19,7 +19,7 @@
#include <GL/gl.h>
#pragma warning(disable : 4244)
#include "vector.h"
#include "vectorb.h"
#include "font.h"
#include "progmesh.h"
#include "rabdata.h"

0
applications/utilities/surface/surfaceCoarsen/bunnylod/list.h → applications/utilities/surface/surfaceCoarsen/bunnylod/listb.h
View file

4
applications/utilities/surface/surfaceCoarsen/bunnylod/progmesh.C
View file

@ -13,8 +13,8 @@
#include <assert.h>
//#include <windows.h>
#include "vector.h"
#include "list.h"
#include "vectorb.h"
#include "listb.h"
#include "progmesh.h"
#define min(x,y) (((x) <= (y)) ? (x) : (y))

4
applications/utilities/surface/surfaceCoarsen/bunnylod/progmesh.h
View file

@ -18,8 +18,8 @@
#ifndef PROGRESSIVE_MESH_H
#define PROGRESSIVE_MESH_H
#include "vector.h"
#include "list.h"
#include "vectorb.h"
#include "listb.h"
class tridata {
public:

2
applications/utilities/surface/surfaceCoarsen/bunnylod/vector.C → applications/utilities/surface/surfaceCoarsen/bunnylod/vectorb.C
View file

@ -3,7 +3,7 @@
#include <math.h>
#include <assert.h>
#include "vector.h"
#include "vectorb.h"
float sqr(float a) {return a*a;}

0
applications/utilities/surface/surfaceCoarsen/bunnylod/vector.h → applications/utilities/surface/surfaceCoarsen/bunnylod/vectorb.h
View file

64
bin/tools/RunFunctions
View file

@ -73,6 +73,11 @@ runParallel ()
LOG_NAME=log.$APP_NAME
fi
if [ "$WM_OSTYPE" = "MSWindows" ]
then
APP_RUN="${APP_RUN}.exe"
fi
if [ -f $LOG_NAME ] ; then
echo "$APP_NAME already run on $PWD: remove log file to run"
else
@ -139,27 +144,52 @@ cloneCase ()
makeFsiCaseLinks ()
{
cd $1
cd system
ln -s ../../$2/system $2
cd ../constant
ln -s ../../$2/constant $2
cd ../0
ln -s ../../$2/0 $2
cd ../..
if [ "$WM_OSTYPE" = "MSWindows" ]
then
cd $1
cd system
cp -r ../../$2/system $2
cd ../constant
cp -r ../../$2/constant $2
cd ../0
cp -r ../../$2/0 $2
cd ../..
else
cd $1
cd system
ln -s ../../$2/system $2
cd ../constant
ln -s ../../$2/constant $2
cd ../0
ln -s ../../$2/0 $2
cd ../..
fi
}
makeFsiResultsLinks ()
{
cd $1
TIME_DIRS=`foamInfoExec -times | sed '1,/constant/d'`
echo "makeFsiResultsLinks for" $TIME_DIRS
cd ../$2
for T in $TIME_DIRS
do
ln -s ../$1/${T}/solid ${T}
done
cd ..
if [ "$WM_OSTYPE" = "MSWindows" ]
then
cd $1
TIME_DIRS=`foamInfoExec -times | sed '1,/constant/d'`
echo "makeFsiResultsLinks for" $TIME_DIRS
cd ../$2
for T in $TIME_DIRS
do
cp -r ../$1/${T}/solid ${T}
done
cd ..
else
cd $1
TIME_DIRS=`foamInfoExec -times | sed '1,/constant/d'`
echo "makeFsiResultsLinks for" $TIME_DIRS
cd ../$2
for T in $TIME_DIRS
do
ln -s ../$1/${T}/solid ${T}
done
cd ..
fi
}
#------------------------------------------------------------------------------

28
etc/bashrc
View file

@ -160,10 +160,11 @@ done
: ${WM_OSTYPE:=POSIX}; export WM_OSTYPE
# Compiler: set to Gcc or Icc (for Intel's icc)
# Compiler: set to Gcc, Icc (for Intel's icc) or Clang
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
: ${WM_COMPILER:=Gcc}; export WM_COMPILER
#: ${WM_COMPILER:=Icc}; export WM_COMPILER
#: ${WM_COMPILER:=Clang}; export WM_COMPILER
export WM_COMPILER_ARCH=
export WM_COMPILER_LIB_ARCH=
@ -316,6 +317,19 @@ Linux)
export WM_LDFLAGS='-mfloat-abi=hard'
;;
aarch64)
# https://gcc.gnu.org/onlinedocs/gcc/AArch64-Options.html
# This command will provide more details for your specific processor
# gcc -c -Q -march=native -mtune=native --help=target
WM_ARCH=linuxARM8
export WM_COMPILER_LIB_ARCH=64
export WM_CC='gcc'
export WM_CXX='g++'
export WM_CFLAGS='-fPIC -march=native -mtune=native'
export WM_CXXFLAGS='-fPIC -march=native -mtune=native'
export WM_LDFLAGS=''
;;
*)
echo Unknown processor type `uname -m` for Linux
;;
@ -366,7 +380,7 @@ Darwin)
echo "Using Macports binaries"
fi
export WM_USE_MACPORT=1
export WM_USE_MACPORT=0
export WM_BASE_COMPILER=`echo $WM_COMPILER | tr -d "[:digit:]"`
export WM_MACPORT_MPI_VERSION=`echo $WM_COMPILER | tr "[:upper:]" "[:lower:]"`
export WM_MACPORT_VERSION=`echo $WM_MACPORT_MPI_VERSION | tr -d "[:alpha:]" | sed -e "s/\(.\)\(.\)/\1\.\2/"`
@ -435,8 +449,14 @@ Darwin)
export WM_FC="gfortran-mp-$WM_MACPORT_VERSION"
elif [ "$WM_BASE_COMPILER" == "Clang" ]
then
export WM_CC="clang-mp-$WM_MACPORT_VERSION"
export WM_CXX="clang++-mp-$WM_MACPORT_VERSION"
if [ "$WM_USE_MACPORT" == "1" ]
then
export WM_CC="clang-mp-$WM_MACPORT_VERSION"
export WM_CXX="clang++-mp-$WM_MACPORT_VERSION"
else
export WM_CC="clang"
export WM_CXX="clang++"
fi
# Seems like there is no Fortran-frontend for LLVM at thistime
elif [ "$WM_BASE_COMPILER" == "Dragonegg" ]
then

4
etc/prefs.sh-EXAMPLE
View file

@ -160,8 +160,10 @@ export FOAM_VERBOSE=1
# System installed bison
#export BISON_SYSTEM=1
# System installed flex
# System installed flex. FLEX_DIR should point to the directory where
# $FLEX_DIR/bin/flex is located
#export FLEX_SYSTEM=1
#export FLEX_DIR=/usr
# System installed m4
#export M4_SYSTEM=1

19
src/ODE/Make/files
View file

@ -15,6 +15,23 @@ $(translationODE)/translationODE.C
sixDOF = sixDOF
$(sixDOF)/finiteRotation/finiteRotation.C
$(sixDOF)/sixDOFqODE/sixDOFqODE.C
$(sixDOF)/sixDOFbodies/sixDOFbodies.C
$(sixDOF)/sixDOFODE/constraints/rotationalConstraints/rotationalConstraint/rotationalConstraint.C
$(sixDOF)/sixDOFODE/constraints/rotationalConstraints/constantAngularAcceleration/constantAngularAcceleration.C
$(sixDOF)/sixDOFODE/constraints/translationalConstraints/translationalConstraint/translationalConstraint.C
$(sixDOF)/sixDOFODE/constraints/translationalConstraints/constantTranslationalAcceleration/constantTranslationalAcceleration.C
$(sixDOF)/sixDOFODE/constraints/translationalConstraints/periodicOscillation/periodicOscillation.C
$(sixDOF)/sixDOFODE/restraints/translationalRestraints/translationalRestraint/translationalRestraint.C
$(sixDOF)/sixDOFODE/restraints/translationalRestraints/linearSpringDamper/linearSpringDamper.C
$(sixDOF)/sixDOFODE/restraints/rotationalRestraints/rotationalRestraint/rotationalRestraint.C
$(sixDOF)/sixDOFODE/restraints/rotationalRestraints/angularDamper/angularDamper.C
$(sixDOF)/sixDOFODE/sixDOFODE.C
$(sixDOF)/sixDOFODE/newSixDOFODE.C
$(sixDOF)/quaternionSixDOF/quaternionSixDOF.C
$(sixDOF)/geometricSixDOF/geometricSixDOF.C
$(sixDOF)/sixDOFBodies/sixDOFBodies.C
LIB = $(FOAM_LIBBIN)/libODE

6
src/ODE/ODESolvers/ODESolver/ODESolver.H
View file

@ -53,7 +53,7 @@ class ODESolver
protected:
// Private data
// Protected data
//- Reference to ODE
ODE& ode_;
@ -62,6 +62,8 @@ protected:
mutable scalarField dydx_;
private:
// Private Member Functions
//- Disallow default bitwise copy construct
@ -126,7 +128,7 @@ public:
) const = 0;
virtual void solve
void solve
(
const scalar xStart,
const scalar xEnd,

54
src/ODE/sixDOF/finiteRotation/finiteRotation.C
View file

@ -26,22 +26,21 @@ Class
Author
Dubravko Matijasevic, FSB Zagreb. All rights reserved.
Update by Hrvoje Jasak
Hrvoje Jasak, FSB Zagreb. All rights reserved.
Vuko Vukcevic, FSB Zagreb. All rights reserved.
\*---------------------------------------------------------------------------*/
#include "objectRegistry.H"
#include "finiteRotation.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
// * * * * * * * * * * * * * * * Static Functions * * * * * * * * * * * * * //
Foam::vector Foam::finiteRotation::rotVector(const tensor& rotT)
{
vector ur = - *( inv(I + rotT) & (I - rotT) );
// Scaling to a unit vector. HJ, problems with round-off
// HJ, 4/Aug/2008
// Scaling to a unit vector. Problems with round-off. HJ, 4/Aug/2008
if (mag(ur) > SMALL)
{
return ur/(mag(ur) + SMALL);
@ -49,8 +48,7 @@ Foam::vector Foam::finiteRotation::rotVector(const tensor& rotT)
else
{
// Rotation vector is undertermined at zero rotation
// Returning arbitrary unit vector
// HJ, 4/Mar/2015
// Returning arbitrary unit vector. HJ, 4/Mar/2015
return vector(0, 0, 1);
}
}
@ -79,22 +77,15 @@ Foam::vector Foam::finiteRotation::eulerAngles(const tensor& rotT)
scalar& pitchAngle = eulerAngles.y();
scalar& yawAngle = eulerAngles.z();
// Calculate roll angle
rollAngle = atan2(rotT.yz(), rotT.zz());
// Use mag to avoid negative value due to round-off
// HJ, 24/Feb/2016
// Bugfix: sqr. SS, 18/Apr/2016
const scalar c2 = sqrt(sqr(rotT.xx()) + sqr(rotT.xy()));
// Calculate pitch angle
pitchAngle = atan2(-rotT.xz(), c2);
pitchAngle = asin(rotT.xz());
const scalar s1 = sin(rollAngle);
const scalar c1 = cos(rollAngle);
// Calculate roll angle
const scalar cosPitch = cos(pitchAngle);
rollAngle = asin(-rotT.yz()/cosPitch);
// Calculate yaw angle
yawAngle = atan2(s1*rotT.zx() - c1*rotT.yx(), c1*rotT.yy() - s1*rotT.zy());
yawAngle = asin(-rotT.xy()/cosPitch);
return eulerAngles;
}
@ -122,6 +113,14 @@ Foam::finiteRotation::finiteRotation
{}
Foam::finiteRotation::finiteRotation(const tensor& R)
:
eInitial_(R),
rotTensor_(R),
rotIncrementTensor_(tensor::zero)
{}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::finiteRotation::~finiteRotation()
@ -130,12 +129,23 @@ Foam::finiteRotation::~finiteRotation()
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
void Foam::finiteRotation::updateRotation(const tensor& R)
{
rotIncrementTensor_ = (R & rotTensor_.T());
rotTensor_ = R;
}
void Foam::finiteRotation::updateRotation(const HamiltonRodriguezRot& rot)
{
tensor rotR = rot.R();
updateRotation(rot.R());
}
rotIncrementTensor_ = (rotR & (rotTensor_.T()));
rotTensor_ = rotR;
void Foam::finiteRotation::updateRotationWithIncrement(const tensor& incR)
{
rotIncrementTensor_ = incR;
rotTensor_ = (incR & rotTensor_);
}

42
src/ODE/sixDOF/finiteRotation/finiteRotation.H
View file

@ -26,7 +26,8 @@ Class
Author
Dubravko Matijasevic, FSB Zagreb. All rights reserved.
Updated by Hrvoje Jasak
Hrvoje Jasak, FSB Zagreb. All rights reserved.
Vuko Vukcevic, FSB Zagreb. All rights reserved.
SourceFiles
finiteRotation.C
@ -61,20 +62,6 @@ class finiteRotation
tensor rotIncrementTensor_;
// Private Member Functions
//- Calculate unit rotation vector from given rotation tensor
static vector rotVector(const tensor& rotT);
//- Calculate rotation angle from given rotation tensor
static scalar rotAngle(const tensor& rotT);
//- Calculate Euler angles (x-y-z (roll-pitch-yaw) convention) from
// given rotation tensor. Reference: Mike Day, Insomniac Games,
// Extracting Euler Angles from a Rotation Matrix.
static vector eulerAngles(const tensor& rotT);
public:
// Constructors
@ -89,17 +76,40 @@ public:
const scalar& angle
);
//- Construct from rotation tensor
explicit finiteRotation(const tensor& R);
// Destructor
~finiteRotation();
// Static Functions
//- Calculate unit rotation vector from given rotation tensor
static vector rotVector(const tensor& rotT);
//- Calculate rotation angle from given rotation tensor
static scalar rotAngle(const tensor& rotT);
//- Calculate Euler angles (x-y-z (roll-pitch-yaw) convention by Bryan)
// given the rotation tensor (global-to-local transformation).
// Reference: Nikravesh: Computer-Aided Analysis of Mechanical Systems
static vector eulerAngles(const tensor& rotT);
// Member Functions
//- Update rotation
//- Update rotation given rotation tensor
void updateRotation(const tensor& R);
//- Update rotation given HamiltonRodriguezRot (quaternions)
void updateRotation(const HamiltonRodriguezRot& rot);
//- Update rotation given increment rotation tensor
void updateRotationWithIncrement(const tensor& incR);
//- Return initial quaternions
const HamiltonRodriguezRot& eInitial() const;

646
src/ODE/sixDOF/geometricSixDOF/geometricSixDOF.C Normal file
View file

@ -0,0 +1,646 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
geometricSixDOF
\*---------------------------------------------------------------------------*/
#include "geometricSixDOF.H"
#include "scalarSquareMatrix.H"
#include "OutputControlDictionary.H"
#include "addToRunTimeSelectionTable.H"
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(geometricSixDOF, 0);
addToRunTimeSelectionTable(sixDOFODE, geometricSixDOF, dictionary);
}
const Foam::debug::tolerancesSwitch Foam::geometricSixDOF::rotIncTensorTol_
(
"geometricSixDOFRotIncTensorTol",
1e-10
);
const Foam::debug::tolerancesSwitch Foam::geometricSixDOF::rotIncRateTol_
(
"geometricSixDOFRotIncRateTol",
1e-6
);
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
Foam::dimensionedVector Foam::geometricSixDOF::A
(
const dimensionedVector& xR,
const dimensionedVector& uR,
const tensor& R,
const scalar t
) const
{
// Create a scalar square matrix representing Newton equations with
// constraints and the corresponding source (right hand side vector).
// Note: size of the matrix is 3 + number of constraints
scalarField rhs(translationalConstraints().size() + 3, 0.0);
scalarSquareMatrix M(rhs.size(), 0.0);
// Insert mass and explicit forcing into the system. Note: translations are
// solved in the global coordinate system and the explicit forcing contains
// restraining forces
const dimensionedVector explicitForcing =
force
(
t,
R.T(),
xR.value(),
uR.value()
);
const vector& efVal = explicitForcing.value();
const scalar& m = mass().value();
forAll(efVal, dirI)
{
M[dirI][dirI] = m;
rhs[dirI] = efVal[dirI];
}
// Insert contributions from the constraints
forAll(translationalConstraints(), tcI)
{
// Get reference to current constraint
const translationalConstraint& curTc = translationalConstraints()[tcI];
// Get matrix contribution from constraint
const vector mc =
curTc.matrixContribution
(
t,
R.T(),
xR.value(),
uR.value()
);
// Get matrix index
const label index = tcI + 3;
// Insert contributions into the matrix
forAll(mc, dirI)
{
M[dirI][index] = mc[dirI];
M[index][dirI] = mc[dirI];
}
// Insert source contribution (remainder of the constraint function)
rhs[index] = curTc.sourceContribution(t, R.T(), xR.value(), uR.value());
}
// Solve the matrix using LU decomposition. Note: solution is in the rhs and
// it contains accelerations in the first three entries and corresponding
// Lagrangian multipliers in other entries.
scalarSquareMatrix::LUsolve(M, rhs);
return
dimensionedVector
(
"A",
force().dimensions()/mass().dimensions(),
vector(rhs[0], rhs[1], rhs[2])
);
}
Foam::dimensionedVector Foam::geometricSixDOF::OmegaDot
(
const tensor& R,
const dimensionedVector& omega,
const scalar t
) const
{
// Create a scalar square matrix representing Euler equations with
// constraints and the corresponding source (right hand side vector).
// Note: size of the matrix is 3 + number of constraints
scalarField rhs(rotationalConstraints().size() + 3, 0.0);
scalarSquareMatrix J(rhs.size(), 0.0);
// Get current inertial-to-local transformation
const dimensionedTensor RT("RT", dimless, R.T());
// Insert moment of inertia and explicit forcing into the system
const dimensionedVector explicitForcing
(
E(omega) // Euler part
+ (
RT
& moment
(
t,
RT.value(),
omega.value()
)
) // External torque with restraints
);
const vector& efVal = explicitForcing.value();
const diagTensor& I = momentOfInertia().value();
forAll(efVal, dirI)
{
J[dirI][dirI] = I[dirI];
rhs[dirI] = efVal[dirI];
}
// Insert contributions from the constraints
forAll(rotationalConstraints(), rcI)
{
// Get reference to current constraint
const rotationalConstraint& curRc = rotationalConstraints()[rcI];
// Get matrix contribution from the constraint
const vector mc =
curRc.matrixContribution
(
t,
RT.value(),
omega.value()
);
// Get matrix index
const label index = rcI + 3;
// Insert contributions into the matrix
forAll(mc, dirI)
{
J[dirI][index] = mc[dirI];
J[index][dirI] = mc[dirI];
}
// Insert source contribution (remainder of the constraint function)
rhs[index] = curRc.sourceContribution(t, RT.value(), omega.value());
}
// Solve the matrix using LU decomposition. Note: solution is in the rhs and
// it contains OmegaDot's in the first three entries and corresponding
// Lagrangian multipliers in other entries.
scalarSquareMatrix::LUsolve(J, rhs);
return
dimensionedVector
(
"OmegaDot",
moment().dimensions()/momentOfInertia().dimensions(),
vector(rhs[0], rhs[1], rhs[2])
);
}
Foam::dimensionedVector Foam::geometricSixDOF::E
(
const dimensionedVector& omega
) const
{
return (*(momentOfInertia() & omega) & omega);
}
Foam::tensor Foam::geometricSixDOF::expMap(const vector& rotInc) const
{
tensor R;
// Calculate the magnitude of the rotational increment vector
const scalar magRotInc = mag(rotInc);
if (magRotInc < rotIncTensorTol_())
{
// No rotational increment
R = I;
}
else
{
// Calculate rotational increment tensor using the exponential map
// Skew-symmetric tensor corresponding to the rotation increment
const tensor skewRotInc(*rotInc);
R = I
+ skewRotInc*sin(magRotInc)/magRotInc
+ (skewRotInc & skewRotInc)*(1.0 - cos(magRotInc))/sqr(magRotInc);
}
return R;
}
Foam::vector Foam::geometricSixDOF::dexpMap
(
const vector& rotInc,
const vector& omega
) const
{
vector rotIncDot;
// Calculate the magnitude of the rotational increment vector
const scalar magRotInc = mag(rotInc);
if (magRotInc < rotIncRateTol_())
{
// Stabilised calculation of rotation increment to avoid small
// denominators
const tensor lbRotIncOmega(lieBracket(rotInc, omega));
rotIncDot =
(
I
+ lbRotIncOmega/2.0
+ lieBracket(rotInc, *lbRotIncOmega)/12.0
) & omega;
}
else
{
// Calculate rate of the rotational increment vector using the
// differential of the exponential map
// Skew-symmetric tensor corresponding to the rotation increment
const tensor skewRotInc(*rotInc);
rotIncDot =
(
I
+ 0.5*skewRotInc
- (skewRotInc & skewRotInc)*
(magRotInc/tan(magRotInc/2.0) - 2.0)/(2.0*sqr(magRotInc))
) & omega;
}
return rotIncDot;
}
// * * * * * * * * * * * Protected Member Functions * * * * * * * * * * * * * //
void Foam::geometricSixDOF::setState(const sixDOFODE& sd)
{
// First set the state in base class subobject
sixDOFODE::setState(sd);
// Cast sixDOFODE& to geometricSixDOF&
const geometricSixDOF& gsd = refCast<const geometricSixDOF>(sd);
// Set state variables for this class
Xrel_ = gsd.Xrel_;
U_ = gsd.U_;
Uaverage_ = gsd.Uaverage_;
rotation_ = gsd.rotation_;
omega_ = gsd.omega_;
omegaAverage_ = gsd.omegaAverage_;
// Copy ODE coefficients: this carries actual ODE state
// HJ, 23/Mar/2015
coeffs_ = gsd.coeffs_;
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::geometricSixDOF::geometricSixDOF(const IOobject& io)
:
sixDOFODE(io),
Xrel_(dict().lookup("Xrel")),
U_(dict().lookup("U")),
Uaverage_("Uaverage", U_),
rotation_(tensor(dict().lookup("rotationTensor"))),
rotIncrement_
(
dict().lookupOrDefault<tensor>("rotationIncrementTensor", tensor::zero)
),
omega_(dict().lookup("omega")),
omegaAverage_("omegaAverage", omega_),
coeffs_(12, 0.0)
{
// Set ODE coefficients from position and rotation
// Linear displacement relative to spring equilibrium
const vector& Xval = Xrel_.value();
coeffs_[0] = Xval.x();
coeffs_[1] = Xval.y();
coeffs_[2] = Xval.z();
// Linear velocity
const vector& Uval = U_.value();
coeffs_[3] = Uval.x();
coeffs_[4] = Uval.y();
coeffs_[5] = Uval.z();
// Rotational velocity in non - inertial coordinate system
const vector& omegaVal = omega_.value();
coeffs_[6] = omegaVal.x();
coeffs_[7] = omegaVal.y();
coeffs_[8] = omegaVal.z();
// Increment of the rotation vector (zero for initial condition)
coeffs_[9] = 0;
coeffs_[10] = 0;
coeffs_[11] = 0;
}
Foam::geometricSixDOF::geometricSixDOF
(
const word& name,
const geometricSixDOF& gsd
)
:
sixDOFODE(name, gsd),
Xrel_(gsd.Xrel_.name(), gsd.Xrel_),
U_(gsd.U_.name(), gsd.U_),
Uaverage_(gsd.Uaverage_.name(), gsd.Uaverage_),
rotation_(gsd.rotation_),
omega_(gsd.omega_.name(), gsd.omega_),
omegaAverage_(gsd.omegaAverage_.name(), gsd.omegaAverage_),
coeffs_(gsd.coeffs_)
{}
Foam::autoPtr<Foam::sixDOFODE> Foam::geometricSixDOF::clone
(
const word& name
) const
{
// Create and return an autoPtr to the new geometricSixDOF object with a
// new name
return autoPtr<sixDOFODE>
(
new geometricSixDOF
(
name,
*this
)
);
}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::geometricSixDOF::~geometricSixDOF()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
const Foam::dimensionedVector& Foam::geometricSixDOF::Xrel() const
{
return Xrel_;
}
const Foam::dimensionedVector& Foam::geometricSixDOF::omega() const
{
return omega_;
}
Foam::dimensionedVector Foam::geometricSixDOF::X() const
{
return Xequilibrium() + Xrel_;
}
const Foam::dimensionedVector& Foam::geometricSixDOF::U() const
{
return U_;
}
const Foam::dimensionedVector& Foam::geometricSixDOF::Uaverage() const
{
return Uaverage_;
}
const Foam::dimensionedVector& Foam::geometricSixDOF::omegaAverage() const
{
return omegaAverage_;
}
Foam::tensor Foam::geometricSixDOF::toRelative() const
{
return rotation_.T();
}
Foam::tensor Foam::geometricSixDOF::toAbsolute() const
{
return rotation_;
}
const Foam::tensor& Foam::geometricSixDOF::rotIncrementTensor() const
{
return rotIncrement_;
}
void Foam::geometricSixDOF::derivatives
(
const scalar x,
const scalarField& y,
scalarField& dydx
) const
{
// Translation
// Set the derivatives for displacement
dydx[0] = y[3];
dydx[1] = y[4];
dydx[2] = y[5];
dimensionedVector curX("curX", dimLength, vector(y[0], y[1], y[2]));
dimensionedVector curU("curU", dimVelocity, vector(y[3], y[4], y[5]));
// Get rotational increment vector (u)
const vector rotIncrementVector(y[9], y[10], y[11]);
// Calculate current rotation tensor obtained with exponential map
const tensor curRot = (rotation_ & expMap(rotIncrementVector));
// Calculate translational acceleration using current rotation
const vector accel = A(curX, curU, curRot, x).value();
// Set the derivatives for velocity
dydx[3] = accel.x();
dydx[4] = accel.y();
dydx[5] = accel.z();
// Rotation
dimensionedVector curOmega
(
"curOmega",
dimless/dimTime,
vector(y[6], y[7], y[8])
);
// Calculate rotational acceleration using current rotation
const vector omegaDot = OmegaDot(curRot, curOmega, x).value();
dydx[6] = omegaDot.x();
dydx[7] = omegaDot.y();
dydx[8] = omegaDot.z();
// Calculate derivative of rotIncrementVector using current rotation
// information
const vector rotIncrementVectorDot =
dexpMap(rotIncrementVector, curOmega.value());
// Set the derivatives for rotation
dydx[9] = rotIncrementVectorDot.x();
dydx[10] = rotIncrementVectorDot.y();
dydx[11] = rotIncrementVectorDot.z();
}
void Foam::geometricSixDOF::update(const scalar delta)
{
// Translation
// Get displacement
const vector Xold = Xrel_.value();
vector& Xval = Xrel_.value();
Xval.x() = coeffs_[0];
Xval.y() = coeffs_[1];
Xval.z() = coeffs_[2];
// Get velocity
vector& Uval = U_.value();
Uval.x() = coeffs_[3];
Uval.y() = coeffs_[4];
Uval.z() = coeffs_[5];
// Stabilise translational constraints if necessary
forAll(translationalConstraints(), tcI)
{
// Note: get end time for this ODE step from mesh, assuming that the top
// level solves this ode from [t - deltaT, t], yielding solution at
// t. Done this way to preserve the interface of ODE class.
// VV, 10/Mar/2017.
const scalar t = dict().time().value();
translationalConstraints()[tcI].stabilise(t, Xval, Uval);
}
// Update (possibly constrained) displacement
coeffs_[0] = Xval.x();
coeffs_[1] = Xval.y();
coeffs_[2] = Xval.z();
// Update (possibly constrained) velocity
coeffs_[3] = Uval.x();
coeffs_[4] = Uval.y();
coeffs_[5] = Uval.z();
// Update average velocity
Uaverage_.value() = (Xval - Xold)/delta;
// Rotation
// Get angular velocity
const vector omegaOld = omega_.value();
vector& omegaVal = omega_.value();
omegaVal.x() = coeffs_[6];
omegaVal.y() = coeffs_[7];
omegaVal.z() = coeffs_[8];
// Update rotational increment tensor
rotIncrement_ = expMap(vector(coeffs_[9], coeffs_[10], coeffs_[11]));
// Update rotational tensor
rotation_ = (rotation_ & rotIncrement_);
// Stabilise rotational constraints if necessary
forAll(rotationalConstraints(), rcI)
{
// Note: get end time for this ODE step from mesh, assuming that the top
// level solves this ode from [t - deltaT, t], yielding solution at
// t. Done this way to preserve the interface of ODE class.
// VV, 10/Mar/2017.
const scalar t = dict().time().value();
rotationalConstraints()[rcI].stabilise(t, omegaVal);
}
// Update (possibly constrained) omega
coeffs_[6] = omegaVal.x();
coeffs_[7] = omegaVal.y();
coeffs_[8] = omegaVal.z();
// Reset increment vector in coefficients for the next step
coeffs_[9] = 0;
coeffs_[10] = 0;
coeffs_[11] = 0;
// Update average omega
omegaAverage_.value() = 0.5*(omegaVal + omegaOld);
}
bool Foam::geometricSixDOF::writeData(Ostream& os) const
{
// First write the part related to base class subobject
sixDOFODE::writeData(os);
// Write type name
os.writeKeyword("type") << tab << type()
<< token::END_STATEMENT << nl << nl;
// Write data
os.writeKeyword("Xrel") << tab << Xrel_
<< token::END_STATEMENT << nl;
os.writeKeyword("U") << tab << U_ << token::END_STATEMENT << nl;
os.writeKeyword("rotationTensor") << tab << rotation_
<< token::END_STATEMENT << nl;
os.writeKeyword("rotationIncrementTensor") << tab << rotIncrement_
<< token::END_STATEMENT << nl;
os.writeKeyword("omega") << tab << omega_
<< token::END_STATEMENT << nl << endl;
return os.good();
}
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
geometricSixDOF
Description
6-DOF solver using a geometric method for integration of rotations.
Run-time selectable constraints are handled via Lagrangian multipliers using
the interface from translational/rotationalConstraint classes.
Reference (bibtex):
@article {terzeEtAl2016,
Author = {Terze, Z. and M\"{u}ller, A. and Zlatar, D.},
title = {Singularity-free time integration of rotational quaternions
using non-redundant ordinary differential equations},
Journal = {Multibody System Dynamics},
Year = {2016},
Volume = {38},
Number = {3},
Pages = {201--225}
}
Note on convention: rotation tensor (R, or rotation_) defines
body-to-inertial coordinate system transformation
(local-to-global). Opposite as in quaternionSixDOF.
Author
Viktor Pandza, FSB Zagreb. All rights reserved.
Vuko Vukcevic, FSB Zagreb. All rights reserved.
SourceFiles
geometricSixDOF.C
\*---------------------------------------------------------------------------*/
#ifndef geometricSixDOF_H
#define geometricSixDOF_H
#include "sixDOFODE.H"
#include "tolerancesSwitch.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class geometricSixDOF Declaration
\*---------------------------------------------------------------------------*/
class geometricSixDOF
:
public sixDOFODE
{
// Private data
// Initial body state variables
//- Displacement relative to spring equilibrium
dimensionedVector Xrel_;
//- Velocity of mass centroid
dimensionedVector U_;
//- Average velocity of mass centroid (evaluated at midstep)
dimensionedVector Uaverage_;
//- Rotation tensor
tensor rotation_;
//- Rotational increment tensor
tensor rotIncrement_;
//- Rotational velocity about mass centroid
dimensionedVector omega_;
//- Average rotational velocity in relative coordinate system
// (evaluated at midstep)
dimensionedVector omegaAverage_;
//- ODE coefficients
scalarField coeffs_;
// Private Member Functions
//- Disallow default bitwise copy construct
geometricSixDOF(const geometricSixDOF&);
//- Disallow default bitwise assignment
void operator=(const geometricSixDOF&);
// Variables in relative coordinate system (solved for)
//- Return acceleration in relative coordinate system
// given current values of relative displacement, velocity,
// orientation (rotation tensor) and time
dimensionedVector A
(
const dimensionedVector& xR,
const dimensionedVector& uR,
const tensor& R,
const scalar t
) const;
//- Return rotational acceleration in relative coordinate system
// given current values for relative rotational velocity,
// orientation (rotation tensor) and time
dimensionedVector OmegaDot
(
const tensor& R,
const dimensionedVector& omega,
const scalar t
) const;
//- Return the Euler part of moment equation
dimensionedVector E
(
const dimensionedVector& omega
) const;
//- Exponential map used to calculate increment of the rotation
// tensor
tensor expMap(const vector& rotInc) const;
//- Differential of the expontential map used to calculate the time
// derivative of rotation increment vector
vector dexpMap(const vector& rotInc, const vector& omega) const;
protected:
// Protected Member Functions
// Non-access control for setting state variables
//- Set ODE parameters from another ODE
virtual void setState(const sixDOFODE&);
public:
// Run-time type information
TypeName("geometricSixDOF");
// Static data members
//- Rotational increment tensor tolerance. Used in expMap member
// function in case the rotation is negligibly small
static const debug::tolerancesSwitch rotIncTensorTol_;
//- Rotational increment rate of change tolerance. Used in dexpMap
// member function in case the rotation rate is negligibly small
static const debug::tolerancesSwitch rotIncRateTol_;
// Constructors
//- Construct from dictionary
geometricSixDOF(const IOobject& io);
//- Construct geometricSixDOF object, changing name
geometricSixDOF
(
const word& name,
const geometricSixDOF& gsd
);
//- Return a clone, changing the name
virtual autoPtr<sixDOFODE> clone(const word& name) const;
// Destructor
virtual ~geometricSixDOF();
// Member Functions
// Virtual interface for 6DOF motion state
// Variables in relative coordinate system
//- Return displacement in translated coordinate system
// relative to spring equilibrium
virtual const dimensionedVector& Xrel() const;
//- Return rotational velocity in relative coordinate system
virtual const dimensionedVector& omega() const;
// Displacement and velocity in the absolute coordinate system
//- Return position of origin in absolute coordinate system
virtual dimensionedVector X() const;
//- Return velocity of origin
virtual const dimensionedVector& U() const;
//- Return average velocity of origin (evaluated at midstep)
virtual const dimensionedVector& Uaverage() const;
// Average motion per time-step
//- Return average rotational velocity in relative coordinate
// system (evaluated at midstep)
virtual const dimensionedVector& omegaAverage() const;
// Rotations
//- Return rotation tensor to relative coordinate system
virtual tensor toRelative() const;
//- Return rotation tensor to absolute coordinate system
virtual tensor toAbsolute() const;
//- Return transformation tensor between new and previous
// rotation
virtual const tensor& rotIncrementTensor() const;
// ODE parameters
//- Return number of equations
virtual label nEqns() const
{
return 12;
}
//- Return access to coefficients
virtual scalarField& coeffs()
{
return coeffs_;
}
//- Return reference to coefficients
virtual const scalarField& coeffs() const
{
return coeffs_;
}
//- Evaluate derivatives
virtual void derivatives
(
const scalar x,
const scalarField& y,
scalarField& dydx
) const;
//- Evaluate Jacobian
virtual void jacobian
(
const scalar x,
const scalarField& y,
scalarField& dfdx,
scalarSquareMatrix& dfdy
) const
{
notImplemented
(
"geometricSixDOF::jacobian\n"
"(\n"
" const scalar x,\n"
" const scalarField& y,\n"
" scalarField& dfdx,\n"
" scalarSquareMatrix& dfdy,\n"
") const"
);
}
//- Update ODE after the solution, advancing by delta
virtual void update(const scalar delta);
// Write controls
//- WriteData member function required by regIOobject
virtual bool writeData(Ostream&) const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
quaternionSixDOF
\*---------------------------------------------------------------------------*/
#include "quaternionSixDOF.H"
#include "OutputControlDictionary.H"
#include "addToRunTimeSelectionTable.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(quaternionSixDOF, 0);
addToRunTimeSelectionTable(sixDOFODE, quaternionSixDOF, dictionary);
}
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
Foam::dimensionedVector Foam::quaternionSixDOF::A
(
const dimensionedVector& xR,
const dimensionedVector& uR,
const HamiltonRodriguezRot& rotation,
const scalar t
) const
{
// Create a scalar square matrix representing Newton equations with
// constraints and the corresponding source (right hand side vector).
// Note: size of the matrix is 3 + number of constraints
scalarField rhs(translationalConstraints().size() + 3, 0.0);
scalarSquareMatrix M(rhs.size(), 0.0);
// Insert mass and explicit forcing into the system. Note: translations are
// solved in the global coordinate system and the explicit forcing contains
// restraining forces
const dimensionedVector explicitForcing =
force
(
t,
rotation.R(),
xR.value(),
uR.value()
);
const vector& efVal = explicitForcing.value();
const scalar& m = mass().value();
forAll(efVal, dirI)
{
M[dirI][dirI] = m;
rhs[dirI] = efVal[dirI];
}
// Insert contributions from the constraints
forAll(translationalConstraints(), tcI)
{
// Get reference to current constraint
const translationalConstraint& curTc = translationalConstraints()[tcI];
// Get matrix contribution from constraint
const vector mc =
curTc.matrixContribution
(
t,
rotation.R(),
xR.value(),
uR.value()
);
// Get matrix index
const label index = tcI + 3;
// Insert contributions into the matrix
forAll(mc, dirI)
{
M[dirI][index] = mc[dirI];
M[index][dirI] = mc[dirI];
}
// Insert source contribution (remainder of the constraint function)
rhs[index] =
curTc.sourceContribution
(
t,
rotation.R(),
xR.value(),
uR.value()
);
}
// Solve the matrix using LU decomposition. Note: solution is in the rhs and
// it contains accelerations in the first three entries and corresponding
// Lagrangian multipliers in other entries.
scalarSquareMatrix::LUsolve(M, rhs);
return
dimensionedVector
(
"A",
force().dimensions()/mass().dimensions(),
vector(rhs[0], rhs[1], rhs[2])
);
}
Foam::dimensionedVector Foam::quaternionSixDOF::OmegaDot
(
const HamiltonRodriguezRot& rotation,
const dimensionedVector& omega,
const scalar t
) const
{
// Create a scalar square matrix representing Euler equations with
// constraints and the corresponding source (right hand side vector).
// Note: size of the matrix is 3 + number of constraints
scalarField rhs(rotationalConstraints().size() + 3, 0.0);
scalarSquareMatrix J(rhs.size(), 0.0);
// Get current inertial-to-local transformation. Note: different convention
// (R represents coordinate transformation from global to local)
const dimensionedTensor R("R", dimless, rotation.R());
// Insert moment of inertia and explicit forcing into the system
const dimensionedVector explicitForcing
(
E(omega) // Euler part
+ (
R.value()
& moment
(
t,
R.value(),
omega.value()
)
) // External torque with restraints
);
const vector& efVal = explicitForcing.value();
const diagTensor& I = momentOfInertia().value();
forAll(efVal, dirI)
{
J[dirI][dirI] = I[dirI];
rhs[dirI] = efVal[dirI];
}
// Insert contributions from the constraints
forAll(rotationalConstraints(), rcI)
{
// Get reference to current constraint
const rotationalConstraint& curRc = rotationalConstraints()[rcI];
// Get matrix contribution from the constraint
const vector mc =
curRc.matrixContribution
(
t,
R.value(),
omega.value()
);
// Get matrix index
const label index = rcI + 3;
// Insert contributions into the matrix
forAll(mc, dirI)
{
J[dirI][index] = mc[dirI];
J[index][dirI] = mc[dirI];
}
// Insert source contribution (remainder of the constraint function)
rhs[index] = curRc.sourceContribution(t, R.value(), omega.value());
}
// Solve the matrix using LU decomposition. Note: solution is in the rhs and
// it contains OmegaDot's in the first three entries and corresponding
// Lagrangian multipliers in other entries.
scalarSquareMatrix::LUsolve(J, rhs);
return
dimensionedVector
(
"OmegaDot",
moment().dimensions()/momentOfInertia().dimensions(),
vector(rhs[0], rhs[1], rhs[2])
);
}
Foam::dimensionedVector Foam::quaternionSixDOF::E
(
const dimensionedVector& omega
) const
{
return (*(momentOfInertia() & omega) & omega);
}
// * * * * * * * * * * * Protected Member Functions * * * * * * * * * * * * * //
void Foam::quaternionSixDOF::setState(const sixDOFODE& sd)
{
// First set the state in base class subobject
sixDOFODE::setState(sd);
// Cast sixDOFODE& to quaternionSixDOF&
const quaternionSixDOF& qsd = refCast<const quaternionSixDOF>(sd);
// Set state variables for this class
Xrel_ = qsd.Xrel_;
U_ = qsd.U_;
Uaverage_ = qsd.Uaverage_;
rotation_ = qsd.rotation_;
omega_ = qsd.omega_;
omegaAverage_ = qsd.omegaAverage_;
// Copy ODE coefficients: this carries actual ODE state
// HJ, 23/Mar/2015
coeffs_ = qsd.coeffs_;
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::quaternionSixDOF::quaternionSixDOF(const IOobject& io)
:
sixDOFODE(io),
Xrel_(dict().lookup("Xrel")),
U_(dict().lookup("U")),
Uaverage_("Uaverage", U_),
rotation_
(
vector(dict().lookup("rotationVector")),
dimensionedScalar(dict().lookup("rotationAngle")).value()
),
omega_(dict().lookup("omega")),
omegaAverage_("omegaAverage", omega_),
coeffs_(13, 0.0)
{
// Set ODE coefficients from position and rotation
// Linear displacement relative to spring equilibrium
const vector& Xval = Xrel_.value();
coeffs_[0] = Xval.x();
coeffs_[1] = Xval.y();
coeffs_[2] = Xval.z();
// Linear velocity
const vector& Uval = U_.value();
coeffs_[3] = Uval.x();
coeffs_[4] = Uval.y();
coeffs_[5] = Uval.z();
// Rotational velocity in non - inertial coordinate system
const vector& omegaVal = omega_.value();
coeffs_[6] = omegaVal.x();
coeffs_[7] = omegaVal.y();
coeffs_[8] = omegaVal.z();
// Quaternions
coeffs_[9] = rotation_.eInitial().e0();
coeffs_[10] = rotation_.eInitial().e1();
coeffs_[11] = rotation_.eInitial().e2();
coeffs_[12] = rotation_.eInitial().e3();
}
Foam::quaternionSixDOF::quaternionSixDOF
(
const word& name,
const quaternionSixDOF& qsd
)
:
sixDOFODE(name, qsd),
Xrel_(qsd.Xrel_.name(), qsd.Xrel_),
U_(qsd.U_.name(), qsd.U_),
Uaverage_(qsd.Uaverage_.name(), qsd.Uaverage_),
rotation_(qsd.rotation_),
omega_(qsd.omega_.name(), qsd.omega_),
omegaAverage_(qsd.omegaAverage_.name(), qsd.omegaAverage_),
coeffs_(qsd.coeffs_)
{}
Foam::autoPtr<Foam::sixDOFODE> Foam::quaternionSixDOF::clone
(
const word& name
) const
{
// Create and return an autoPtr to the new quaternionSixDOF object with a
// new name
return autoPtr<sixDOFODE>
(
new quaternionSixDOF
(
name,
*this
)
);
}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::quaternionSixDOF::~quaternionSixDOF()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
const Foam::dimensionedVector& Foam::quaternionSixDOF::Xrel() const
{
return Xrel_;
}
const Foam::dimensionedVector& Foam::quaternionSixDOF::omega() const
{
return omega_;
}
Foam::dimensionedVector Foam::quaternionSixDOF::X() const
{
return Xequilibrium() + Xrel_;
}
const Foam::dimensionedVector& Foam::quaternionSixDOF::U() const
{
return U_;
}
const Foam::dimensionedVector& Foam::quaternionSixDOF::Uaverage() const
{
return Uaverage_;
}
const Foam::dimensionedVector& Foam::quaternionSixDOF::omegaAverage() const
{
return omegaAverage_;
}
Foam::tensor Foam::quaternionSixDOF::toRelative() const
{
return rotation_.eCurrent().R();
}
Foam::tensor Foam::quaternionSixDOF::toAbsolute() const
{
return rotation_.eCurrent().invR();
}
const Foam::tensor& Foam::quaternionSixDOF::rotIncrementTensor() const
{
return rotation_.rotIncrementTensor();
}
void Foam::quaternionSixDOF::derivatives
(
const scalar x,
const scalarField& y,
scalarField& dydx
) const
{
// Set the derivatives for displacement
dydx[0] = y[3];
dydx[1] = y[4];
dydx[2] = y[5];
dimensionedVector curX("curX", dimLength, vector(y[0], y[1], y[2]));
dimensionedVector curU("curU", dimVelocity, vector(y[3], y[4], y[5]));
const HamiltonRodriguezRot curRotation
(
y[9],
y[10],
y[11],
y[12]
);
const vector accel = A(curX, curU, curRotation, x).value();
dydx[3] = accel.x();
dydx[4] = accel.y();
dydx[5] = accel.z();
// Set the derivatives for rotation
dimensionedVector curOmega
(
"curOmega",
dimless/dimTime,
vector(y[6], y[7], y[8])
);
const vector omegaDot = OmegaDot(curRotation, curOmega, x).value();
dydx[6] = omegaDot.x();
dydx[7] = omegaDot.y();
dydx[8] = omegaDot.z();
dydx[9] = curRotation.eDot(curOmega.value(), 0);
dydx[10] = curRotation.eDot(curOmega.value(), 1);
dydx[11] = curRotation.eDot(curOmega.value(), 2);
dydx[12] = curRotation.eDot(curOmega.value(), 3);
}
void Foam::quaternionSixDOF::update(const scalar delta)
{
// Translation
// Get displacement
const vector Xold = Xrel_.value();
vector& Xval = Xrel_.value();
Xval.x() = coeffs_[0];
Xval.y() = coeffs_[1];
Xval.z() = coeffs_[2];
// Get velocity
vector& Uval = U_.value();
Uval.x() = coeffs_[3];
Uval.y() = coeffs_[4];
Uval.z() = coeffs_[5];
// Stabilise translational constraints if necessary
forAll(translationalConstraints(), tcI)
{
// Note: get end time for this ODE step from mesh, assuming that the top
// level solves this ode from [t - deltaT, t], yielding solution at
// t. Done this way to preserve the interface of ODE class.
// VV, 10/Mar/2017.
const scalar t = dict().time().value();
translationalConstraints()[tcI].stabilise(t, Xval, Uval);
}
// Update (possibly constrained) displacement
coeffs_[0] = Xval.x();
coeffs_[1] = Xval.y();
coeffs_[2] = Xval.z();
// Update (possibly constrained) velocity
coeffs_[3] = Uval.x();
coeffs_[4] = Uval.y();
coeffs_[5] = Uval.z();
// Update average velocity
Uaverage_.value() = (Xval - Xold)/delta;
// Rotation
// Get angular velocity
vector& omegaVal = omega_.value();
omegaVal.x() = coeffs_[6];
omegaVal.y() = coeffs_[7];
omegaVal.z() = coeffs_[8];
rotation_.updateRotation
(
HamiltonRodriguezRot
(
coeffs_[9],
coeffs_[10],
coeffs_[11],
coeffs_[12]
)
);
// Stabilise rotational constraints if necessary
forAll(rotationalConstraints(), rcI)
{
// Note: get end time for this ODE step from mesh, assuming that the top
// level solves this ode from [t - deltaT, t], yielding solution at
// t. Done this way to preserve the interface of ODE class.
// VV, 10/Mar/2017.
const scalar t = dict().time().value();
rotationalConstraints()[rcI].stabilise(t, omegaVal);
}
// Update (possibly constrained) omega
coeffs_[6] = omegaVal.x();
coeffs_[7] = omegaVal.y();
coeffs_[8] = omegaVal.z();
// Update average omega
omegaAverage_.value() = rotation_.omegaAverage(delta);
}
bool Foam::quaternionSixDOF::writeData(Ostream& os) const
{
// First write the part related to base class subobject
sixDOFODE::writeData(os);
// Write type name
os.writeKeyword("type") << tab << type()
<< token::END_STATEMENT << nl << nl;
// Write data
os.writeKeyword("Xrel") << tab << Xrel_
<< token::END_STATEMENT << nl;
os.writeKeyword("U") << tab << U_ << token::END_STATEMENT << nl;
os.writeKeyword("rotationVector") << tab << rotation_.rotVector()
<< token::END_STATEMENT << nl;
os.writeKeyword("rotationAngle") << tab
<< dimensionedScalar("rotAngle", dimless, rotation_.rotAngle())
<< token::END_STATEMENT << nl;
os.writeKeyword("omega") << tab << omega_
<< token::END_STATEMENT << nl << nl;
return os.good();
}
// ************************************************************************* //

286
src/ODE/sixDOF/quaternionSixDOF/quaternionSixDOF.H Normal file
View file

@ -0,0 +1,286 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
quaternionSixDOF
Description
6-DOF solver using quaternions
Run-time selectable constraints are handled via Lagrangian multipliers using
the interface from translationa/rotationalConstraint classes.
Note on convention: rotation tensor R obtained from finiteRotation
(rotation_) defines inertial-to-body coordinate system transformation
(global-to-local). Opposite as in geometrixSixDOF.
Author
Dubravko Matijasevic, FSB Zagreb. All rights reserved.
Reorganization by
Vuko Vukcevic, FSB Zagreb. All rights reserved.
Inno Gatin, FSB Zagreb. All rights reserved.
Hrvoje Jasak, FSB Zagreb. All rights reserved.
SourceFiles
quaternionSixDOF.C
\*---------------------------------------------------------------------------*/
#ifndef quaternionSixDOF_H
#define quaternionSixDOF_H
#include "sixDOFODE.H"
#include "finiteRotation.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class quaternionSixDOF Declaration
\*---------------------------------------------------------------------------*/
class quaternionSixDOF
:
public sixDOFODE
{
// Private data
// Body state variables
//- Displacement relative to spring equilibrium
dimensionedVector Xrel_;
//- Velocity of mass centroid
dimensionedVector U_;
//- Average velocity of mass centroid (evaluated at midstep)
dimensionedVector Uaverage_;
//- Finite rotation
finiteRotation rotation_;
//- Rotational velocity about mass centroid
dimensionedVector omega_;
//- Average rotational velocity in relative coordinate system
// (evaluated at midstep)
dimensionedVector omegaAverage_;
//- ODE coefficients
scalarField coeffs_;
// Private Member Functions
//- Disallow default bitwise copy construct
quaternionSixDOF(const quaternionSixDOF&);
//- Disallow default bitwise assignment
void operator=(const quaternionSixDOF&);
// Variables in relative coordinate system (solved for)
//- Return acceleration in relative coordinate system
// given current values of relative displacement and velocity
dimensionedVector A
(
const dimensionedVector& xR,
const dimensionedVector& uR,
const HamiltonRodriguezRot& rotation,
const scalar t
) const;
//- Return rotational acceleration in relative coordinate system
// given current values for relative rotational velocity
dimensionedVector OmegaDot
(
const HamiltonRodriguezRot& rotation,
const dimensionedVector& omega,
const scalar t
) const;
//- Return the Euler part of moment equation
dimensionedVector E
(
const dimensionedVector& omega
) const;
protected:
// Protected Member Functions
// Non-access control for setting state variables
//- Set ODE parameters from another ODE
virtual void setState(const sixDOFODE&);
public:
// Run-time type information
TypeName("quaternionSixDOF");
// Constructors
//- Construct from dictionary
quaternionSixDOF(const IOobject& io);
//- Construct quaternionSixDOF object, changing name
quaternionSixDOF
(
const word& name,
const quaternionSixDOF& qsd
);
//- Return a clone, changing the name
virtual autoPtr<sixDOFODE> clone(const word& name) const;
// Destructor
virtual ~quaternionSixDOF();
// Member Functions
// Virtual interface for 6DOF motion state
// Variables in relative coordinate system
//- Return displacement in translated coordinate system
// relative to spring equilibrium
virtual const dimensionedVector& Xrel() const;
//- Return rotational velocity in relative coordinate system
virtual const dimensionedVector& omega() const;
// Displacement and velocity in the absolute coordinate system
//- Return position of origin in absolute coordinate system
virtual dimensionedVector X() const;
//- Return velocity of origin
virtual const dimensionedVector& U() const;
//- Return average velocity of origin (evaluated at midstep)
virtual const dimensionedVector& Uaverage() const;
// Average motion per time-step
//- Return average rotational velocity in relative coordinate
// system (evaluated at midstep)
virtual const dimensionedVector& omegaAverage() const;
// Rotations
//- Return rotation tensor to relative coordinate system
virtual tensor toRelative() const;
//- Return rotation tensor to absolute coordinate system
virtual tensor toAbsolute() const;
//- Return transformation tensor between new and previous
// rotation
virtual const tensor& rotIncrementTensor() const;
// ODE parameters
//- Return number of equations
virtual label nEqns() const
{
return 13;
}
//- Return access to coefficients
virtual scalarField& coeffs()
{
return coeffs_;
}
//- Return reference to coefficients
virtual const scalarField& coeffs() const
{
return coeffs_;
}
//- Evaluate derivatives
virtual void derivatives
(
const scalar x,
const scalarField& y,
scalarField& dydx
) const;
//- Evaluate Jacobian
virtual void jacobian
(
const scalar x,
const scalarField& y,
scalarField& dfdx,
scalarSquareMatrix& dfdy
) const
{
notImplemented
(
"quaternionSixDOF::jacobian\n"
"(\n"
" const scalar x,\n"
" const scalarField& y,\n"
" scalarField& dfdx,\n"
" scalarSquareMatrix& dfdy,\n"
") const"
);
}
//- Update ODE after the solution, advancing by delta
virtual void update(const scalar delta);
// Write controls
//- WriteData member function required by regIOobject
virtual bool writeData(Ostream&) const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

36
src/ODE/sixDOF/quaternions/HamiltonRodriguezRot.H
View file

@ -26,7 +26,8 @@ Class
Author
Dubravko Matijasevic, FSB Zagreb. All rights reserved.
Updated by Hrvoje Jasak
Hrvoje Jasak, FSB Zagreb. All rights reserved.
Vuko Vukcevic, FSB Zagreb. All rights reserved.
Description
Rotation defined with 4 parameters: quaternions.
@ -66,13 +67,13 @@ class HamiltonRodriguezRot
scalarRectangularMatrix Gt_;
//- Inertial to rotated coordinate system transformation
mutable tensor R_;
tensor R_;
// Private member functions
//- Calculate R_ - inertial to body coord. sys. rotation
inline void calculateR() const
inline void calculateR()
{
R_.xx() = 2*(e1_*e1_ + e0_*e0_ - 0.5);
R_.xy() = 2*(e1_*e2_ + e0_*e3_);
@ -133,11 +134,7 @@ public:
}
//- Construct from rotation vector and angle
explicit HamiltonRodriguezRot
(
const vector& rVect,
const scalar& rAngle
)
HamiltonRodriguezRot(const vector& rVect, const scalar& rAngle)
:
Gt_(4, 3),
R_(tensor::zero)
@ -164,6 +161,29 @@ public:
calculateGt();
}
//- Construct from rotation tensor
explicit HamiltonRodriguezRot(const tensor& R)
:
Gt_(4, 3),
R_(R)
{
// Calculate Hamilton - Rodriguez (Euler) parameters from rotation
// matrix
// Note: sign of e0_ assumed positive
e0_ = Foam::sqrt((tr(R) + 1.0)/4.0);
// Helper variable
const scalar oneByFourEo = 1.0/(4.0*e0_);
e1_ = oneByFourEo*(R.zy() - R.yz());
e2_ = oneByFourEo*(R.xz() - R.zx());
e3_ = oneByFourEo*(R.yx() - R.xy());
// Calculate Gt
calculateGt();
}
// Destructor

41
src/ODE/sixDOF/sixDOFbodies/sixDOFbodies.C → src/ODE/sixDOF/sixDOFBodies/sixDOFBodies.C
View file

@ -22,7 +22,7 @@ License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
sixDOFbodies
sixDOFBodies
Description
6-DOF solver for multiple bodies
@ -33,11 +33,11 @@ Author
\*---------------------------------------------------------------------------*/
#include "objectRegistry.H"
#include "sixDOFbodies.H"
#include "sixDOFBodies.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
void Foam::sixDOFbodies::setBodies()
void Foam::sixDOFBodies::setBodies()
{
// Find if duplicate name existes
forAll (names_, bodyI)
@ -51,8 +51,9 @@ void Foam::sixDOFbodies::setBodies()
{
if (names_[bodyI] == names_[otherBody])
{
FatalErrorIn("sixDOFbodies::setBodies()")
<< "Duplicate names of bodies: this is not allowed"
FatalErrorIn("sixDOFBodies::setBodies()")
<< "Found duplicate name: " << names_[bodyI]
<< " for bodies. This is not allowed."
<< exit(FatalError);
}
}
@ -66,7 +67,7 @@ void Foam::sixDOFbodies::setBodies()
odes_.set
(
bodyI,
new sixDOFqODE
sixDOFODE::New
(
IOobject
(
@ -82,19 +83,18 @@ void Foam::sixDOFbodies::setBodies()
solvers_.set
(
bodyI,
ODESolver::New
(
lookup("solver"),
odes_[bodyI]
)
ODESolver::New(lookup("solver"), odes_[bodyI])
);
Info<< "Finished creating " << odes_[bodyI].type()
<< " object for body " << names_[bodyI] << endl;
}
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::sixDOFbodies::sixDOFbodies
Foam::sixDOFBodies::sixDOFBodies
(
const Time& runTime
)
@ -121,7 +121,7 @@ Foam::sixDOFbodies::sixDOFbodies
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
void Foam::sixDOFbodies::solve()
void Foam::sixDOFBodies::solve()
{
const scalar tol = readScalar(lookup("eps"));
@ -130,10 +130,19 @@ void Foam::sixDOFbodies::solve()
Info << "Solving 6-DOF for " << names_[bodyI] << " in time"
<< tab << "T = " << runTime_.value() << " s" << endl;
// Note: set external force and moment needed to initialize the state
// of the sixDOFODE to correctly take into account multiple calls per
// time step. Using constant force and moment throughout simulation.
odes_[bodyI].setExternalForceAndMoment
(
dimensionedVector(odes_[bodyI].force()),
dimensionedVector(odes_[bodyI].moment())
);
solvers_[bodyI].solve
(
runTime_.value() - runTime_.deltaT().value(),
runTime_.value(),
runTime_.value() + runTime_.deltaT().value(),
tol,
runTime_.deltaT().value()
);
@ -141,13 +150,13 @@ void Foam::sixDOFbodies::solve()
}
const Foam::wordList& Foam::sixDOFbodies::names() const
const Foam::wordList& Foam::sixDOFBodies::names() const
{
return names_;
}
const Foam::PtrList<Foam::sixDOFqODE>& Foam::sixDOFbodies::operator()() const
const Foam::PtrList<Foam::sixDOFODE>& Foam::sixDOFBodies::operator()() const
{
return odes_;
}

31
src/ODE/sixDOF/sixDOFbodies/sixDOFbodies.H → src/ODE/sixDOF/sixDOFBodies/sixDOFBodies.H
View file

@ -22,7 +22,7 @@ License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
sixDOFbodies
sixDOFBodies
Description
6-DOF solver for multiple bodies
@ -31,18 +31,17 @@ Author
Dubravko Matijasevic, FSB Zagreb. All rights reserved.
SourceFiles
sixDOFbodies.C
sixDOFBodies.C
\*---------------------------------------------------------------------------*/
#ifndef sixDOFbodies_H
#define sixDOFbodies_H
#ifndef sixDOFBodies_H
#define sixDOFBodies_H
#include "foamTime.H"
#include "IOdictionary.H"
#include "sixDOFqODE.H"
#include "sixDOFODE.H"
#include "ODESolver.H"
#include "finiteRotation.H"
#include "primitiveFields.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -51,10 +50,10 @@ namespace Foam
{
/*---------------------------------------------------------------------------*\
Class sixDOFbodies Declaration
Class sixDOFBodies Declaration
\*---------------------------------------------------------------------------*/
class sixDOFbodies
class sixDOFBodies
:
public IOdictionary
{
@ -63,10 +62,10 @@ class sixDOFbodies
//- Reference to time
const Time& runTime_;
// Pointer list of Foam::sixDOFqODE objects
PtrList<sixDOFqODE> odes_;
// Pointer list of Foam::sixDOFODE objects
PtrList<sixDOFODE> odes_;
// Pointer list of Foam::sixDOFqODE solvers
// Pointer list of Foam::sixDOFODE solvers
PtrList<ODESolver> solvers_;
// Name list of solved bodies
@ -76,10 +75,10 @@ class sixDOFbodies
// Private Member Functions
//- Disallow default bitwise copy construct
sixDOFbodies(const sixDOFbodies&);
sixDOFBodies(const sixDOFBodies&);
//- Disallow default bitwise assignment
void operator=(const sixDOFbodies&);
void operator=(const sixDOFBodies&);
//- Set bodies
void setBodies();
@ -90,12 +89,12 @@ public:
// Constructors
//- Construct from Time
sixDOFbodies(const Time& runTime);
sixDOFBodies(const Time& runTime);
// Destructor
virtual ~sixDOFbodies()
virtual ~sixDOFBodies()
{}
@ -105,7 +104,7 @@ public:
const wordList& names() const;
//- Return list of bodies
const PtrList<sixDOFqODE>& operator()() const;
const PtrList<sixDOFODE>& operator()() const;
//- Solve ODEs and update position
void solve();

145
src/ODE/sixDOF/sixDOFODE/constraints/rotationalConstraints/constantAngularAcceleration/constantAngularAcceleration.C Normal file
View file

@ -0,0 +1,145 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "constantAngularAcceleration.H"
#include "addToRunTimeSelectionTable.H"
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(constantAngularAcceleration, 0);
addToRunTimeSelectionTable
(
rotationalConstraint,
constantAngularAcceleration,
word
);
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::constantAngularAcceleration::constantAngularAcceleration
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
)
:
rotationalConstraint(name, dict, sixDOF),
dir_(dict.lookup("constraintDirection")),
alpha_(readScalar(dict.lookup("angularAcceleration"))),
inGlobal_(dict.lookup("inGlobalCoordinateSystem"))
{
// Rescale direction
if (mag(dir_) < SMALL)
{
FatalErrorIn
(
"Foam::constantTranslationalAcceleration::"
"constantTranslationalAcceleration"
"\n("
"\n const word& name,"
"\n const dictionary& dict"
"\n)"
) << "Zero direction specified. This is not allowed."
<< exit(FatalError);
}
else
{
dir_ /= mag(dir_);
}
}
Foam::autoPtr<Foam::rotationalConstraint>
Foam::constantAngularAcceleration::clone() const
{
return autoPtr<rotationalConstraint>
(
new constantAngularAcceleration(*this)
);
}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::constantAngularAcceleration::~constantAngularAcceleration()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
Foam::vector Foam::constantAngularAcceleration::matrixContribution
(
const scalar,
const tensor& toRelative,
const vector&
) const
{
vector mc;
if (inGlobal_)
{
// Constraint is given in global (inertial) coordinate system, transform
// it to local
mc = toRelative & dir_;
}
else
{
// Constraint already in local (body) coordinate system
mc = dir_;
}
return mc;
}
Foam::scalar Foam::constantAngularAcceleration::sourceContribution
(
const scalar,
const tensor& toRelative,
const vector&
) const
{
return alpha_;
}
void Foam::constantAngularAcceleration::write(Ostream& os) const
{
os.writeKeyword("type") << tab << type()
<< token::END_STATEMENT << nl << nl;
os.writeKeyword("constraintDirection") << tab << dir_
<< token::END_STATEMENT << nl;
os.writeKeyword("angularAcceleration") << tab << alpha_
<< token::END_STATEMENT << nl;
os.writeKeyword("inGlobalCoordinateSystem") << tab << inGlobal_
<< token::END_STATEMENT << endl;
}
// ************************************************************************* //

143
src/ODE/sixDOF/sixDOFODE/constraints/rotationalConstraints/constantAngularAcceleration/constantAngularAcceleration.H Normal file
View file

@ -0,0 +1,143 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::constantAngularAcceleration
Description
Rotational constraint defined by constant angular acceleration:
g(omegaDot) = omegaDot - a = 0.
Author
Viktor Pandza, FSB Zagreb. All rights reserved.
Vuko Vukcevic, FSB Zagreb. All rights reserved.
SourceFiles
constantAngularAcceleration.C
\*---------------------------------------------------------------------------*/
#ifndef constantAngularAcceleration_H
#define constantAngularAcceleration_H
#include "rotationalConstraint.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class constantAngularAcceleration Declaration
\*---------------------------------------------------------------------------*/
class constantAngularAcceleration
:
public rotationalConstraint
{
// Private data
//- Direction of the constraint (unit vector)
vector dir_;
//- Constant value of angular acceleration
const scalar alpha_;
//- Switch whether the constraint should be applied in local or global
// coordinate system
const Switch inGlobal_;
public:
//- Runtime type information
TypeName("constantAngularAcceleration");
// Constructors
//- Construct from dictionary
constantAngularAcceleration
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
);
//- Construct and return a clone
virtual autoPtr<rotationalConstraint> clone() const;
// Destructor
virtual ~constantAngularAcceleration();
// Member Functions
// Constraint specific functions
//- Return matrix contribution defined by constraint, f(t)
virtual vector matrixContribution
(
const scalar,
const tensor& toRelative,
const vector&
) const;
//- Return source contribution defined by constraint, a(t)
virtual scalar sourceContribution
(
const scalar,
const tensor&,
const vector&
) const;
//- Stabilise the constraint
virtual void stabilise
(
const scalar,
vector&
) const
{
// Does nothing: no need to stabilise this constraint
}
// I-O Functions
//- Virtual write function
virtual void write(Ostream& os) const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

131
src/ODE/sixDOF/sixDOFODE/constraints/rotationalConstraints/rotationalConstraint/rotationalConstraint.C Normal file
View file

@ -0,0 +1,131 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "rotationalConstraint.H"
#include "sixDOFODE.H"
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(rotationalConstraint, 0);
defineRunTimeSelectionTable(rotationalConstraint, word);
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::rotationalConstraint::rotationalConstraint
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
)
:
name_(name),
sixDOF_(sixDOF)
{}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::rotationalConstraint::~rotationalConstraint()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
const Foam::word& Foam::rotationalConstraint::name() const
{
return name_;
}
const Foam::sixDOFODE& Foam::rotationalConstraint::sixDOF() const
{
return sixDOF_;
}
Foam::autoPtr<Foam::rotationalConstraint> Foam::rotationalConstraint::New
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
)
{
const word constraintType(dict.lookup("type"));
wordConstructorTable::iterator cstrIter =
wordConstructorTablePtr_->find(constraintType);
if (cstrIter == wordConstructorTablePtr_->end())
{
FatalErrorIn
(
"rotationalConstraint::New"
"\n("
"\n const word& name,"
"\n const dictionary& dict,"
"\n)"
) << "Unknown rotation constraint type: " << constraintType
<< endl << endl
<< "Valid rotation constraint types are: " << endl
<< wordConstructorTablePtr_->sortedToc()
<< exit(FatalError);
}
return autoPtr<rotationalConstraint>
(
cstrIter()
(
name,
dict,
sixDOF
)
);
}
// * * * * * * * * * * * * * * * IOstream Operators * * * * * * * * * * * * //
Foam::Ostream& Foam::operator<<
(
Ostream& os,
const rotationalConstraint& rc
)
{
os << rc.name_ << nl << token::BEGIN_BLOCK << nl;
rc.write(os);
os << token::END_BLOCK << endl;
os.check("Ostream& operator<<(Ostream&, const rotationalConstraint&");
return os;
}
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::rotationalConstraint
Description
Abstract base class containing interface for rotation constraints used
within sixDOFODE classes.
The constraint is implicitly defined as:
g(omegaDot, t) = f(t)*omegaDot + a(t) = 0,
where omegaDot is angular acceleration.
Interface provides all the necessary data for inserting the constraint into
the resulting linear system via Lagrangian multipliers:
1. matrixContribution() - corresponding to f(t) (prefactor multiplying
omegaDot), to be inserted into the matrix.
2. sourceContribution() - corresponding to a(t), to be inserted into right
hand side vector.
Notes:
1. Constraints are usually used alongside appropriate initial
conditions (rotational rate in a given direction),
2. According to DAE theory, a stabilisation on orientation/angular velocity
is necessary based on "differentiation index" used to obtain the final
form of the constraint.
Author
Viktor Pandza, FSB Zagreb. All rights reserved.
Vuko Vukcevic, FSB Zagreb. All rights reserved.
SourceFiles
rotationalConstraint.C
\*---------------------------------------------------------------------------*/
#ifndef rotationalConstraint_H
#define rotationalConstraint_H
#include "typeInfo.H"
#include "runTimeSelectionTables.H"
#include "autoPtr.H"
#include "dimensionedTypes.H"
#include "dictionary.H"
#include "Switch.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
class sixDOFODE;
/*---------------------------------------------------------------------------*\
Class rotationalConstraint Declaration
\*---------------------------------------------------------------------------*/
class rotationalConstraint
{
// Private Data
//- Name of the constraint
word name_;
//- Reference to underlying sixDOFODE
const sixDOFODE& sixDOF_;
public:
//- Runtime type information
TypeName("rotationalConstraint");
// Declare run-time constructor selection table
declareRunTimeSelectionTable
(
autoPtr,
rotationalConstraint,
word,
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
),
(name, dict, sixDOF)
);
//- Class used for the read-construction of
// PtrLists of rotationalConstraint
class iNew
{
const sixDOFODE& sixDOF_;
public:
iNew(const sixDOFODE& sixDOF)
:
sixDOF_(sixDOF)
{}
autoPtr<rotationalConstraint> operator()(Istream& is) const
{
word name(is);
dictionary dict(is);
return rotationalConstraint::New(name, dict, sixDOF_);
}
};
// Constructors
//- Construct from dictionary
rotationalConstraint
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
);
//- Construct and return a clone
virtual autoPtr<rotationalConstraint> clone() const = 0;
// Selectors
//- Return a reference to the selected rotationalConstraint
static autoPtr<rotationalConstraint> New
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
);
// Destructor
virtual ~rotationalConstraint();
// Member Functions
// Access functions
//- Return name
const word& name() const;
//- Return underlying sixDOFODE object
const sixDOFODE& sixDOF() const;
// Constraint specific functions
//- Return matrix contribution defined by constraint, f(t)
virtual vector matrixContribution
(
const scalar t,
const tensor& toRelative,
const vector& omega
) const = 0;
//- Return source contribution defined by constraint, a(t)
virtual scalar sourceContribution
(
const scalar t,
const tensor& toRelative,
const vector& omega
) const = 0;
//- Stabilise the constraint (necessary for constraints with
// differentiation index higher than zero)
virtual void stabilise
(
const scalar t,
vector& omega
) const = 0;
// I-O Functions and Operators
//- Virtual write function
virtual void write(Ostream& os) const = 0;
//- Ostream operator implemented in terms of write operator
friend Ostream& operator<<
(
Ostream& os,
const rotationalConstraint& rc
);
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "constantTranslationalAcceleration.H"
#include "addToRunTimeSelectionTable.H"
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(constantTranslationalAcceleration, 0);
addToRunTimeSelectionTable
(
translationalConstraint,
constantTranslationalAcceleration,
word
);
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::constantTranslationalAcceleration::constantTranslationalAcceleration
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
)
:
translationalConstraint(name, dict, sixDOF),
dir_(dict.lookup("constraintDirection")),
a_(readScalar(dict.lookup("translationalAcceleration")))
{
// Rescale direction
if (mag(dir_) < SMALL)
{
FatalErrorIn
(
"Foam::constantTranslationalAcceleration::"
"constantTranslationalAcceleration"
"\n("
"\n const word& name,"
"\n const dictionary& dict"
"\n)"
) << "Zero direction specified. This is not allowed."
<< exit(FatalError);
}
else
{
dir_ /= mag(dir_);
}
}
Foam::autoPtr<Foam::translationalConstraint>
Foam::constantTranslationalAcceleration::clone() const
{
return autoPtr<translationalConstraint>
(
new constantTranslationalAcceleration(*this)
);
}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::constantTranslationalAcceleration::~constantTranslationalAcceleration()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
Foam::vector Foam::constantTranslationalAcceleration::matrixContribution
(
const scalar,
const tensor&,
const vector&,
const vector&
) const
{
return dir_;
}
Foam::scalar Foam::constantTranslationalAcceleration::sourceContribution
(
const scalar,
const tensor&,
const vector&,
const vector&
) const
{
return a_;
}
void Foam::constantTranslationalAcceleration::write(Ostream& os) const
{
os.writeKeyword("type") << tab << type()
<< token::END_STATEMENT << nl << nl;
os.writeKeyword("constraintDirection") << tab << dir_
<< token::END_STATEMENT << nl;
os.writeKeyword("translationalAcceleration") << tab << a_
<< token::END_STATEMENT << endl;
}
// ************************************************************************* //

142
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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::constantTranslationalAcceleration
Description
Translational constraint defined by constant translational acceleration
g(vDot) = vDot - a = 0.
Author
Viktor Pandza, FSB Zagreb. All rights reserved.
Vuko Vukcevic, FSB Zagreb. All rights reserved.
SourceFiles
constantTranslationalAcceleration.C
\*---------------------------------------------------------------------------*/
#ifndef constantTranslationalAcceleration_H
#define constantTranslationalAcceleration_H
#include "translationalConstraint.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class constantTranslationalAcceleration Declaration
\*---------------------------------------------------------------------------*/
class constantTranslationalAcceleration
:
public translationalConstraint
{
// Private data
//- Direction of the constraint (unit vector)
vector dir_;
//- Constant value of the translational acceleration
const scalar a_;
public:
//- Runtime type information
TypeName("constantTranslationalAcceleration");
// Constructors
//- Construct from dictionary
constantTranslationalAcceleration
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
);
//- Construct and return a clone
virtual autoPtr<translationalConstraint> clone() const;
// Destructor
virtual ~constantTranslationalAcceleration();
// Member Functions
// Constraint specific functions
//- Return matrix contribution defined by constraint, f(t)
virtual vector matrixContribution
(
const scalar,
const tensor&,
const vector&,
const vector&
) const;
//- Return source contribution defined by constraint, a(t)
virtual scalar sourceContribution
(
const scalar,
const tensor&,
const vector&,
const vector&
) const;
//- Stabilise the constraint
virtual void stabilise
(
const scalar,
vector&,
vector&
) const
{
// Does nothing: no need to stabilise this constraint
};
// I-O Functions
//- Virtual write function
virtual void write(Ostream& os) const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "periodicOscillation.H"
#include "addToRunTimeSelectionTable.H"
#include "mathematicalConstants.H"
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(periodicOscillation, 0);
addToRunTimeSelectionTable
(
translationalConstraint,
periodicOscillation,
word
);
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::periodicOscillation::periodicOscillation
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
)
:
translationalConstraint(name, dict, sixDOF),
dir_(dict.lookup("direction")),
a_(readScalar(dict.lookup("motionAmplitude"))),
period_(readScalar(dict.lookup("period"))),
omega_(mathematicalConstant::twoPi/period_),
phi_(readScalar(dict.lookup("phaseShift"))*mathematicalConstant::pi/180.0)
{
// Rescale direction
if (mag(dir_) < SMALL)
{
FatalErrorIn
(
"Foam::periodicOscillation::periodicOscillation"
"\n("
"\n const word& name,"
"\n const dictionary& dict"
"\n)"
) << "Zero direction specified. This is not allowed."
<< exit(FatalError);
}
else
{
dir_ /= mag(dir_);
}
}
Foam::autoPtr<Foam::translationalConstraint>
Foam::periodicOscillation::clone() const
{
return autoPtr<translationalConstraint>
(
new periodicOscillation(*this)
);
}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::periodicOscillation::~periodicOscillation()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
Foam::vector Foam::periodicOscillation::matrixContribution
(
const scalar,
const tensor&,
const vector&,
const vector&
) const
{
return dir_;
}
Foam::scalar Foam::periodicOscillation::sourceContribution
(
const scalar t,
const tensor&,
const vector&,
const vector&
) const
{
return -a_*sqr(omega_)*(sin(omega_*t + phi_));
}
void Foam::periodicOscillation::stabilise
(
const scalar t,
vector& x,
vector& u
) const
{
// Set the displacement according to periodic oscillation
// First subtract calculated displacement...
x -= (x & dir_)*dir_;
// ... then add the correct displacement
x += dir_*sin(omega_*t + phi_);
// Set the velocity according to periodic oscillation
// First subract calculated velocity...
u -= (u & dir_)*dir_;
// ... then add the correct velocity
u += dir_*cos(omega_*t + phi_);
}
void Foam::periodicOscillation::write(Ostream& os) const
{
os.writeKeyword("type") << tab << type()
<< token::END_STATEMENT << nl << nl;
os.writeKeyword("direction") << tab << dir_
<< token::END_STATEMENT << nl;
os.writeKeyword("motionAmplitude") << tab << a_
<< token::END_STATEMENT << nl;
os.writeKeyword("period") << tab << period_
<< token::END_STATEMENT << nl;
os.writeKeyword("phaseShift") << tab
<< phi_*180.0/mathematicalConstant::pi << token::END_STATEMENT << endl;
}
// ************************************************************************* //

156
src/ODE/sixDOF/sixDOFODE/constraints/translationalConstraints/periodicOscillation/periodicOscillation.H Normal file
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@ -0,0 +1,156 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::periodicOscillation
Description
Periodic translational motion given by:
g(vDot, t) = vDot + a*omega^2*sin(omega*t + phi) = 0,
where a is the amplitude of oscillation, omega radial frequency and phi is
the phase shift.
Note: since this constraint is basically algebraic (dependent on
displacement), the differentiation index is two so the stabilisation on
displacement and velocity is necessary.
Author
Viktor Pandza, FSB Zagreb. All rights reserved.
Vuko Vukcevic, FSB Zagreb. All rights reserved.
SourceFiles
periodicOscillation.C
\*---------------------------------------------------------------------------*/
#ifndef periodicOscillation_H
#define periodicOscillation_H
#include "translationalConstraint.H"
#include "OFstream.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class periodicOscillation Declaration
\*---------------------------------------------------------------------------*/
class periodicOscillation
:
public translationalConstraint
{
// Private data
//- Direction
vector dir_;
//- Amplitude of the motion
const scalar a_;
//- Period of the motion
const scalar period_;
//- Radian frequency of the motion
const scalar omega_;
//- Phase shift (in degrees)
const scalar phi_;
public:
//- Runtime type information
TypeName("periodicOscillation");
// Constructors
//- Construct from dictionary
periodicOscillation
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
);
//- Construct and return a clone
virtual autoPtr<translationalConstraint> clone() const;
// Destructor
virtual ~periodicOscillation();
// Member Functions
// Constraint specific functions
//- Return matrix contribution defined by constraint, f(t)
virtual vector matrixContribution
(
const scalar,
const tensor&,
const vector&,
const vector&
) const;
//- Return source contribution defined by constraint, a(t)
virtual scalar sourceContribution
(
const scalar t,
const tensor&,
const vector&,
const vector&
) const;
//- Stabilise the constraint
virtual void stabilise
(
const scalar t,
vector& x,
vector& u
) const;
// I-O Functions
//- Virtual write function
virtual void write(Ostream& os) const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "translationalConstraint.H"
#include "sixDOFODE.H"
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(translationalConstraint, 0);
defineRunTimeSelectionTable(translationalConstraint, word);
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::translationalConstraint::translationalConstraint
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
)
:
name_(name),
sixDOF_(sixDOF)
{}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::translationalConstraint::~translationalConstraint()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
const Foam::word& Foam::translationalConstraint::name() const
{
return name_;
}
const Foam::sixDOFODE& Foam::translationalConstraint::sixDOF() const
{
return sixDOF_;
}
Foam::autoPtr<Foam::translationalConstraint> Foam::translationalConstraint::New
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
)
{
const word constraintType(dict.lookup("type"));
wordConstructorTable::iterator cstrIter =
wordConstructorTablePtr_->find(constraintType);
if (cstrIter == wordConstructorTablePtr_->end())
{
FatalErrorIn
(
"translationalConstraint::New"
"\n("
"\n const word& name,"
"\n const dictionary& dict,"
"\n)"
) << "Unknown translation constraint type: " << constraintType
<< endl << endl
<< "Valid translation constraint types are: " << endl
<< wordConstructorTablePtr_->sortedToc()
<< exit(FatalError);
}
return autoPtr<translationalConstraint>
(
cstrIter()
(
name,
dict,
sixDOF
)
);
}
// * * * * * * * * * * * * * * * IOstream Operators * * * * * * * * * * * * //
Foam::Ostream& Foam::operator<<
(
Ostream& os,
const translationalConstraint& tc
)
{
os << tc.name_ << nl << token::BEGIN_BLOCK << nl;
tc.write(os);
os << token::END_BLOCK << endl;
os.check("Ostream& operator<<(Ostream&, const translationalConstraint&");
return os;
}
// ************************************************************************* //

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src/ODE/sixDOF/sixDOFODE/constraints/translationalConstraints/translationalConstraint/translationalConstraint.H Normal file
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@ -0,0 +1,228 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::translationalConstraint
Description
Abstract base class containing interface for translational constraints used
within sixDOFODE classes.
The constraint is implicitly defined as:
g(vDot, t) = f(t)*vDot + a(t) = 0,
where vDot is translational acceleration.
Interface provides all the necessary data for inserting the constraint into
the resulting linear system via Lagrangian multipliers:
1. matrixContribution() - corresponding to f(t) (prefactor multiplying
vDot), to be inserted into the matrix.
2. sourceContribution() - corresponding to a(t), to be inserted into right
hand side vector.
Notes:
1. Constraints are usually used alongside appropriate initial
conditions (velocity in a given direction),
2. According to DAE theory, a stabilisation on displacement/velocity is
necessary based on "differentiation index" used to obtain the final form
of the constraint.
Author
Viktor Pandza, FSB Zagreb. All rights reserved.
Vuko Vukcevic, FSB Zagreb. All rights reserved.
SourceFiles
translationalConstraint.C
\*---------------------------------------------------------------------------*/
#ifndef translationalConstraint_H
#define translationalConstraint_H
#include "typeInfo.H"
#include "runTimeSelectionTables.H"
#include "autoPtr.H"
#include "dimensionedTypes.H"
#include "dictionary.H"
#include "Switch.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
class sixDOFODE;
/*---------------------------------------------------------------------------*\
Class translationalConstraint Declaration
\*---------------------------------------------------------------------------*/
class translationalConstraint
{
// Private Data
//- Name of the constraint
word name_;
//- Reference to underlying sixDOFODE
const sixDOFODE& sixDOF_;
public:
//- Runtime type information
TypeName("translationalConstraint");
// Declare run-time constructor selection table
declareRunTimeSelectionTable
(
autoPtr,
translationalConstraint,
word,
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
),
(name, dict, sixDOF)
);
//- Class used for the read-construction of
// PtrLists of translationalConstraint
class iNew
{
const sixDOFODE& sixDOF_;
public:
iNew(const sixDOFODE& sixDOF)
:
sixDOF_(sixDOF)
{}
autoPtr<translationalConstraint> operator()(Istream& is) const
{
word name(is);
dictionary dict(is);
return translationalConstraint::New(name, dict, sixDOF_);
}
};
// Constructors
//- Construct from dictionary
translationalConstraint
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
);
//- Construct and return a clone
virtual autoPtr<translationalConstraint> clone() const = 0;
// Selectors
//- Return a reference to the selected translationalConstraint
static autoPtr<translationalConstraint> New
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
);
// Destructor
virtual ~translationalConstraint();
// Member Functions
// Access functions
//- Return name
const word& name() const;
//- Return underlying sixDOFODE object
const sixDOFODE& sixDOF() const;
// Constraint specific functions
//- Return matrix contribution defined by constraint, f(t)
virtual vector matrixContribution
(
const scalar t,
const tensor& toRelative,
const vector& x,
const vector& u
) const = 0;
//- Return source contribution defined by constraint, a(t)
virtual scalar sourceContribution
(
const scalar t,
const tensor& toRelative,
const vector& x,
const vector& u
) const = 0;
//- Stabilise the constraint (necessary for constraints with
// differentiation index higher than zero)
virtual void stabilise
(
const scalar t,
vector& x,
vector& u
) const = 0;
// I-O Functions and Operators
//- Virtual write function
virtual void write(Ostream& os) const = 0;
//- Ostream operator implemented in terms of write operator
friend Ostream& operator<<
(
Ostream& os,
const translationalConstraint& tc
);
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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#ifndef constraintsAndRestraints_H
#define constraintsAndRestraints_H
#include "translationalConstraint.H"
#include "rotationalConstraint.H"
#include "translationalRestraint.H"
#include "rotationalRestraint.H"
#endif

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | OpenFOAM: The Open Source CFD Toolbox
\\ / O peration |
\\ / A nd | Copyright held by original author
\\/ M anipulation |
-------------------------------------------------------------------------------
License
This file is part of OpenFOAM.
OpenFOAM is free software; you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation; either version 2 of the License, or (at your
option) any later version.
OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
for more details.
You should have received a copy of the GNU General Public License
along with OpenFOAM; if not, write to the Free Software Foundation,
Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
Class
sixDOFODE
\*---------------------------------------------------------------------------*/
#include "error.H"
#include "objectRegistry.H"
#include "sixDOFODE.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Foam::autoPtr<Foam::sixDOFODE> Foam::sixDOFODE::New(const IOobject& io)
{
word sixDOFODETypeName;
// Get object registry
const objectRegistry& database = io.db();
// Check whether the dictionary is in the database
if (database.foundObject<IOdictionary>(io.name()))
{
sixDOFODETypeName =
word
(
database.lookupObject<IOdictionary>(io.name()).lookup("type")
);
}
else
{
sixDOFODETypeName = word(IOdictionary(io).lookup("type"));
}
dictionaryConstructorTable::iterator cstrIter =
dictionaryConstructorTablePtr_->find(sixDOFODETypeName);
if (cstrIter == dictionaryConstructorTablePtr_->end())
{
FatalErrorIn
(
"sixDOFODE::New(const IOobject& io)"
) << "Unknown sixDOFODE " << sixDOFODETypeName
<< endl << endl
<< "Valid sixDOFODE types are:" << endl
<< dictionaryConstructorTablePtr_->toc()
<< exit(FatalError);
}
return autoPtr<sixDOFODE>(cstrIter()(io));
}
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "angularDamper.H"
#include "addToRunTimeSelectionTable.H"
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(angularDamper, 0);
addToRunTimeSelectionTable
(
rotationalRestraint,
angularDamper,
word
);
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::angularDamper::angularDamper
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
)
:
rotationalRestraint(name, dict, sixDOF),
angDampingCoeffs_(dict.lookup("angularDamping")),
inGlobal_(dict.lookup("inGlobalCoordinateSystem"))
{}
Foam::autoPtr<Foam::rotationalRestraint>
Foam::angularDamper::clone() const
{
return autoPtr<rotationalRestraint>
(
new angularDamper(*this)
);
}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::angularDamper::~angularDamper()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
Foam::vector Foam::angularDamper::restrainingMoment
(
const scalar,
const tensor& toRelative,
const vector& omega
) const
{
vector rm;
if (inGlobal_)
{
// Restraint given in global (inertial) coordinate system, transform it
// to local
rm = (toRelative & angDampingCoeffs_) & omega;
}
else
{
// Restraint already in local (body) coordinate system
rm = angDampingCoeffs_ & omega;
}
return -rm;
}
void Foam::angularDamper::write(Ostream& os) const
{
os.writeKeyword("type") << tab << type()
<< token::END_STATEMENT << nl << nl;
os.writeKeyword("angularDamping") << tab << angDampingCoeffs_
<< token::END_STATEMENT << nl;
os.writeKeyword("inGlobalCoordinateSystem") << tab << inGlobal_
<< token::END_STATEMENT << endl;
}
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::angularDamper
Description
Rotational restraint corresponding to angular damper defined by angular
damping coefficients.
Author
Vuko Vukcevic, FSB Zagreb. All rights reserved.
SourceFiles
angularDamper.C
\*---------------------------------------------------------------------------*/
#ifndef angularDamper_H
#define angularDamper_H
#include "rotationalRestraint.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class angularDamper Declaration
\*---------------------------------------------------------------------------*/
class angularDamper
:
public rotationalRestraint
{
// Private Data
//- Angular damping coefficients
diagTensor angDampingCoeffs_;
//- Whether the damper is applied in global or local c. s.
Switch inGlobal_;
public:
//- Runtime type information
TypeName("angularDamper");
// Constructors
//- Construct from dictionary
angularDamper
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
);
//- Construct and return a clone
virtual autoPtr<rotationalRestraint> clone() const;
// Destructor
virtual ~angularDamper();
// Member Functions
// Restraint specific functions
//- Return restraining moment (in the global coordinate system)
virtual vector restrainingMoment
(
const scalar t,
const tensor& toRelative,
const vector& omega
) const;
// I-O Functions and Operators
//- Virtual write function
virtual void write(Ostream& os) const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "rotationalRestraint.H"
#include "sixDOFODE.H"
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(rotationalRestraint, 0);
defineRunTimeSelectionTable(rotationalRestraint, word);
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::rotationalRestraint::rotationalRestraint
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
)
:
name_(name),
sixDOF_(sixDOF)
{}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::rotationalRestraint::~rotationalRestraint()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
const Foam::word& Foam::rotationalRestraint::name() const
{
return name_;
}
const Foam::sixDOFODE& Foam::rotationalRestraint::sixDOF() const
{
return sixDOF_;
}
Foam::autoPtr<Foam::rotationalRestraint> Foam::rotationalRestraint::New
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
)
{
const word restraintType(dict.lookup("type"));
wordConstructorTable::iterator cstrIter =
wordConstructorTablePtr_->find(restraintType);
if (cstrIter == wordConstructorTablePtr_->end())
{
FatalErrorIn
(
"rotationalRestraint::New"
"\n("
"\n const word& name,"
"\n const dictionary& dict"
"\n)"
) << "Unknown translation restraint type: " << restraintType
<< endl << endl
<< "Valid translation restraint types are: " << endl
<< wordConstructorTablePtr_->sortedToc()
<< exit(FatalError);
}
return autoPtr<rotationalRestraint>
(
cstrIter()
(
name,
dict,
sixDOF
)
);
}
// * * * * * * * * * * * * * * * IOstream Operators * * * * * * * * * * * * //
Foam::Ostream& Foam::operator<<
(
Ostream& os,
const rotationalRestraint& rr
)
{
os << rr.name_ << nl << token::BEGIN_BLOCK << nl;
rr.write(os);
os << token::END_BLOCK << endl;
os.check("Ostream& operator<<(Ostream&, const rotationalRestraint&");
return os;
}
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::rotationalRestraint
Description
Abstract base class containing interface for rotational restraints used
within sixDOFODE classes.
Interface provides restraining moment to the rotational equations of
motion via moment() member function.
Author
Vuko Vukcevic, FSB Zagreb. All rights reserved.
SourceFiles
rotationalRestraint.C
\*---------------------------------------------------------------------------*/
#ifndef rotationalRestraint_H
#define rotationalRestraint_H
#include "typeInfo.H"
#include "runTimeSelectionTables.H"
#include "autoPtr.H"
#include "dimensionedTypes.H"
#include "dictionary.H"
#include "Switch.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
class sixDOFODE;
/*---------------------------------------------------------------------------*\
Class rotationalRestraint Declaration
\*---------------------------------------------------------------------------*/
class rotationalRestraint
{
// Private Data
//- Name of the restraint
word name_;
//- Reference to underlying sixDOFODE
const sixDOFODE& sixDOF_;
public:
//- Runtime type information
TypeName("rotationalRestraint");
// Declare run-time constructor selection table
declareRunTimeSelectionTable
(
autoPtr,
rotationalRestraint,
word,
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
),
(name, dict, sixDOF)
);
//- Class used for the read-construction of
// PtrLists of rotationalRestraint
class iNew
{
const sixDOFODE& sixDOF_;
public:
iNew(const sixDOFODE& sixDOF)
:
sixDOF_(sixDOF)
{}
autoPtr<rotationalRestraint> operator()(Istream& is) const
{
word name(is);
dictionary dict(is);
return rotationalRestraint::New(name, dict, sixDOF_);
}
};
// Constructors
//- Construct from dictionary
rotationalRestraint
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
);
//- Construct and return a clone
virtual autoPtr<rotationalRestraint> clone() const = 0;
// Selectors
//- Return a reference to the selected rotationalRestraint
static autoPtr<rotationalRestraint> New
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
);
// Destructor
virtual ~rotationalRestraint();
// Member Functions
// Access functions
//- Return name
const word& name() const;
//- Return underlying sixDOFODE object
const sixDOFODE& sixDOF() const;
// Restraint specific functions
//- Return restraining moment (in the local coordinate system)
virtual vector restrainingMoment
(
const scalar t,
const tensor& toRelative,
const vector& omega
) const = 0;
// I-O Functions and Operators
//- Virtual write function
virtual void write(Ostream& os) const = 0;
//- Ostream operator implemented in terms of write operator
friend Ostream& operator<<
(
Ostream& os,
const rotationalRestraint& rr
);
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "linearSpringDamper.H"
#include "addToRunTimeSelectionTable.H"
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(linearSpringDamper, 0);
addToRunTimeSelectionTable
(
translationalRestraint,
linearSpringDamper,
word
);
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::linearSpringDamper::linearSpringDamper
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
)
:
translationalRestraint(name, dict, sixDOF),
linSpringCoeffs_(dict.lookup("linearSpring")),
linDampingCoeffs_(dict.lookup("linearDamping"))
{}
Foam::autoPtr<Foam::translationalRestraint>
Foam::linearSpringDamper::clone() const
{
return autoPtr<translationalRestraint>
(
new linearSpringDamper(*this)
);
}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::linearSpringDamper::~linearSpringDamper()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
Foam::vector Foam::linearSpringDamper::restrainingForce
(
const scalar,
const tensor&,
const vector& x,
const vector& u
) const
{
return - (linSpringCoeffs_ & x) - (linDampingCoeffs_ & u);
}
void Foam::linearSpringDamper::write(Ostream& os) const
{
os.writeKeyword("type") << tab << type()
<< token::END_STATEMENT << nl << nl;
os.writeKeyword("linearSpring") << tab << linSpringCoeffs_
<< token::END_STATEMENT << nl;
os.writeKeyword("linearDamping") << tab << linDampingCoeffs_
<< token::END_STATEMENT << endl;
}
// ************************************************************************* //

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@ -0,0 +1,120 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::linearSpringDamper
Description
Translational restraint corresponding to linear spring and linear damper
defined by linear spring coefficients and linear damping coefficients.
Author
Vuko Vukcevic, FSB Zagreb. All rights reserved.
SourceFiles
linearSpringDamper.C
\*---------------------------------------------------------------------------*/
#ifndef linearSpringDamper_H
#define linearSpringDamper_H
#include "translationalRestraint.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class linearSpringDamper Declaration
\*---------------------------------------------------------------------------*/
class linearSpringDamper
:
public translationalRestraint
{
// Private Data
//- Linear spring coefficients
diagTensor linSpringCoeffs_;
//- Linear damping coefficients
diagTensor linDampingCoeffs_;
public:
//- Runtime type information
TypeName("linearSpringDamper");
// Constructors
//- Construct from dictionary
linearSpringDamper
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
);
//- Construct and return a clone
virtual autoPtr<translationalRestraint> clone() const;
// Destructor
virtual ~linearSpringDamper();
// Member Functions
// Restraint specific functions
//- Return restraining force (in the global coordinate system)
virtual vector restrainingForce
(
const scalar t,
const tensor& toRelative,
const vector& x,
const vector& u
) const;
// I-O Functions and Operators
//- Virtual write function
virtual void write(Ostream& os) const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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@ -0,0 +1,131 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "translationalRestraint.H"
#include "sixDOFODE.H"
// * * * * * * * * * * * * * * Static Data Members * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(translationalRestraint, 0);
defineRunTimeSelectionTable(translationalRestraint, word);
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::translationalRestraint::translationalRestraint
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
)
:
name_(name),
sixDOF_(sixDOF)
{}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::translationalRestraint::~translationalRestraint()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
const Foam::word& Foam::translationalRestraint::name() const
{
return name_;
}
const Foam::sixDOFODE& Foam::translationalRestraint::sixDOF() const
{
return sixDOF_;
}
Foam::autoPtr<Foam::translationalRestraint> Foam::translationalRestraint::New
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
)
{
const word restraintType(dict.lookup("type"));
wordConstructorTable::iterator cstrIter =
wordConstructorTablePtr_->find(restraintType);
if (cstrIter == wordConstructorTablePtr_->end())
{
FatalErrorIn
(
"translationalRestraint::New"
"\n("
"\n const word& name,"
"\n const dictionary& dict"
"\n)"
) << "Unknown translation restraint type: " << restraintType
<< endl << endl
<< "Valid translation restraint types are: " << endl
<< wordConstructorTablePtr_->sortedToc()
<< exit(FatalError);
}
return autoPtr<translationalRestraint>
(
cstrIter()
(
name,
dict,
sixDOF
)
);
}
// * * * * * * * * * * * * * * * IOstream Operators * * * * * * * * * * * * //
Foam::Ostream& Foam::operator<<
(
Ostream& os,
const translationalRestraint& tr
)
{
os << tr.name_ << nl << token::BEGIN_BLOCK << nl;
tr.write(os);
os << token::END_BLOCK << endl;
os.check("Ostream& operator<<(Ostream&, const translationalRestraint&");
return os;
}
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::translationalRestraint
Description
Abstract base class containing interface for translational restraints used
within sixDOFODE classes.
Interface provides restraining forces to the translational equations of
motion via force() member function.
Author
Vuko Vukcevic, FSB Zagreb. All rights reserved.
SourceFiles
translationalRestraint.C
\*---------------------------------------------------------------------------*/
#ifndef translationalRestraint_H
#define translationalRestraint_H
#include "typeInfo.H"
#include "runTimeSelectionTables.H"
#include "autoPtr.H"
#include "dimensionedTypes.H"
#include "dictionary.H"
#include "Switch.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
class sixDOFODE;
/*---------------------------------------------------------------------------*\
Class translationalRestraint Declaration
\*---------------------------------------------------------------------------*/
class translationalRestraint
{
// Private Data
//- Name of the restraint
word name_;
//- Reference to underlying sixDOFODE
const sixDOFODE& sixDOF_;
public:
//- Runtime type information
TypeName("translationalRestraint");
// Declare run-time constructor selection table
declareRunTimeSelectionTable
(
autoPtr,
translationalRestraint,
word,
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
),
(name, dict, sixDOF)
);
//- Class used for the read-construction of
// PtrLists of translationalRestraint
class iNew
{
const sixDOFODE& sixDOF_;
public:
iNew(const sixDOFODE& sixDOF)
:
sixDOF_(sixDOF)
{}
autoPtr<translationalRestraint> operator()(Istream& is) const
{
word name(is);
dictionary dict(is);
return translationalRestraint::New(name, dict, sixDOF_);
}
};
// Constructors
//- Construct from dictionary
translationalRestraint
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
);
//- Construct and return a clone
virtual autoPtr<translationalRestraint> clone() const = 0;
// Selectors
//- Return a reference to the selected translationalRestraint
static autoPtr<translationalRestraint> New
(
const word& name,
const dictionary& dict,
const sixDOFODE& sixDOF
);
// Destructor
virtual ~translationalRestraint();
// Member Functions
// Access functions
//- Return name
const word& name() const;
//- Return underlying sixDOFODE object
const sixDOFODE& sixDOF() const;
// Restraint specific functions
//- Return restraining force (in the global coordinate system)
virtual vector restrainingForce
(
const scalar t,
const tensor& toRelative,
const vector& x,
const vector& u
) const = 0;
// I-O Functions and Operators
//- Virtual write function
virtual void write(Ostream& os) const = 0;
//- Ostream operator implemented in terms of write operator
friend Ostream& operator<<
(
Ostream& os,
const translationalRestraint& tr
);
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
sixDOFODE
\*---------------------------------------------------------------------------*/
#include "objectRegistry.H"
#include "sixDOFODE.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(sixDOFODE, 0);
defineRunTimeSelectionTable(sixDOFODE, dictionary);
}
// * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * * * //
void Foam::sixDOFODE::updateRelaxFactors()
{
// Calculate translational relax factor
const scalar saveOldRelFacT = oldRelaxFactorT_;
oldRelaxFactorT_ = relaxFactorT_;
if(magSqr(A_[0] - An_[1] - A_[1] - An_[2]) > SMALL)
{
relaxFactorT_ = saveOldRelFacT + (saveOldRelFacT - 1)*
(
(A_[1] - An_[2])
& (A_[0] - An_[1] - A_[1] - An_[2])
)/
magSqr(A_[0] - An_[1] - A_[1] - An_[2]);
}
else
{
relaxFactorT_ = minRelaxFactor_;
}
// Bound the relaxation factor for stability
if (relaxFactorT_ > maxRelaxFactor_)
{
relaxFactorT_ = maxRelaxFactor_;
}
else if (relaxFactorT_ < minRelaxFactor_)
{
relaxFactorT_ = minRelaxFactor_;
}
// Calculate rotational relax factor
const scalar saveOldRelFacR = oldRelaxFactorR_;
oldRelaxFactorR_ = relaxFactorR_;
if
(
magSqr(OmegaDot_[0] - OmegaDotn_[1] - OmegaDot_[1] - OmegaDotn_[2])
> SMALL
)
{
relaxFactorR_ = saveOldRelFacR
+ (saveOldRelFacR - 1)*
(
(OmegaDot_[1] - OmegaDotn_[2])
& (OmegaDot_[0] - OmegaDotn_[1] - OmegaDot_[1] - OmegaDotn_[2])
)/
magSqr(OmegaDot_[0] - OmegaDotn_[1] - OmegaDot_[1] - OmegaDotn_[2]);
}
else
{
relaxFactorR_ = minRelaxFactor_;
}
// Bound the relaxation factor for stability
if (relaxFactorR_ > maxRelaxFactor_)
{
relaxFactorR_ = maxRelaxFactor_;
}
else if (relaxFactorR_ < minRelaxFactor_)
{
relaxFactorR_ = minRelaxFactor_;
}
}
void Foam::sixDOFODE::relaxAcceleration()
{
if (mag(minRelaxFactor_ - maxRelaxFactor_) < SMALL)
{
// Fixed relaxation
relaxFactorT_ = minRelaxFactor_;
relaxFactorR_ = minRelaxFactor_;
}
else
{
// Use Aitkens relaxation
// Update Aitkens relaxation factor
updateRelaxFactors();
// Update non relaxed accelerations
An_[1] = An_[2];
An_[2] = (force_/mass_).value();
OmegaDotn_[1] = OmegaDotn_[2];
OmegaDotn_[2] = (inv(momentOfInertia_) & moment_).value();
}
const vector Aold = A_[2];
const vector OmegaDotold = OmegaDot_[2];
force_.value() =
Aold*mass_.value()
+ relaxFactorT_*(force_.value() - Aold*mass_.value());
moment_.value() =
(momentOfInertia_.value() & OmegaDotold)
+ relaxFactorR_*
(
moment_.value()
- (momentOfInertia_.value() & OmegaDotold)
);
// Update relaxed old accelerations
A_[0] = A_[1];
A_[1] = A_[2];
A_[2] = (force_/mass_).value();
OmegaDot_[0] = OmegaDot_[1];
OmegaDot_[1] = OmegaDot_[2];
OmegaDot_[2] = (inv(momentOfInertia_) & moment_).value();
}
void Foam::sixDOFODE::initState()
{
// Get time index
const label timeIndex = dict().time().timeIndex();
if (curTimeIndex_ < timeIndex)
{
// First call in this time index, store data
oldStatePtr_ = this->clone(dict().name() + "_0");
Info<< "First 6DOF solution within a time step, storing old data..."
<< endl;
}
else
{
// Multiple calls in this time index, reset this data
this->setState(oldStatePtr_());
Info<< "Repeated 6DOF solution within a time step, restoring data..."
<< endl;
}
// Update local time index
curTimeIndex_ = timeIndex;
}
// * * * * * * * * * * * Protected Member Functions * * * * * * * * * * * * * //
void Foam::sixDOFODE::setState(const sixDOFODE& sd)
{
// Set state does not copy AList_, AOld_, relaxFactor_ and relaxFactorOld_.
// In case of multiple updates, overwriting Aitkens relaxation parameters
// would invalidate the underrelaxation. IG, 5/May/2016
mass_ = sd.mass_;
momentOfInertia_ = sd.momentOfInertia_;
Xequilibrium_ = sd.Xequilibrium_;
force_ = sd.force_;
moment_ = sd.moment_;
// Copy constraints
// Translational constraints
translationalConstraints_.setSize(sd.translationalConstraints_.size());
forAll(sd.translationalConstraints_, trI)
{
translationalConstraints_.set
(
trI,
sd.translationalConstraints_[trI].clone()
);
}
// Rotational constraints
rotationalConstraints_.setSize(sd.rotationalConstraints_.size());
forAll(sd.rotationalConstraints_, rrI)
{
rotationalConstraints_.set
(
rrI,
sd.rotationalConstraints_[rrI].clone()
);
}
// Copy restraints
// Translational restraints
translationalRestraints_.setSize(sd.translationalRestraints_.size());
forAll(sd.translationalRestraints_, trI)
{
translationalRestraints_.set
(
trI,
sd.translationalRestraints_[trI].clone()
);
}
// Rotational restraints
rotationalRestraints_.setSize(sd.rotationalRestraints_.size());
forAll(sd.rotationalRestraints_, rrI)
{
rotationalRestraints_.set
(
rrI,
sd.rotationalRestraints_[rrI].clone()
);
}
}
Foam::dimensionedVector Foam::sixDOFODE::force
(
const scalar t,
const tensor& toRelative,
const vector& x,
const vector& u
) const
{
// Get ODE step fraction
const scalar alpha = odeStepFraction(t);
// Calculate restraining force
dimensionedVector rForce("zero", dimForce, vector::zero);
forAll(translationalRestraints_, trI)
{
rForce.value() += translationalRestraints_[trI].restrainingForce
(
t, // Time
toRelative, // Transformation tensor
x, // Position in the global c.s.
u // Velocity in the global c.s.
);
}
// Return linearly interpolated external force with restraining force
return (alpha*oldStatePtr_->force() + (1 - alpha)*force()) + rForce;
}
Foam::dimensionedVector Foam::sixDOFODE::moment
(
const scalar t,
const tensor& toRelative,
const vector& omega
) const
{
// Get ODE step fraction
const scalar alpha = odeStepFraction(t);
// Calculate restraining moment
dimensionedVector rMoment("zero", dimForce*dimLength, vector::zero);
forAll(rotationalRestraints_, rrI)
{
rMoment.value() += rotationalRestraints_[rrI].restrainingMoment
(
t, // Time
toRelative, // Transformation tensor
omega // Angular velocity in local c.s.
);
}
// Return linearly interpolated external moment with restraining moment
return (alpha*oldStatePtr_->moment() + (1 - alpha)*moment() + rMoment);
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
Foam::sixDOFODE::sixDOFODE(const IOobject& io)
:
ODE(),
dict_(io, *this),
mass_(dict_.lookup("mass")),
momentOfInertia_(dict_.lookup("momentOfInertia")),
Xequilibrium_(dict_.lookup("equilibriumPosition")),
aitkensRelaxation_
(
dict_.lookupOrDefault<Switch>("useAitkensRelaxation", false)
),
minRelaxFactor_(dict_.lookupOrDefault<scalar>("minRelaxFactor", 0.1)),
maxRelaxFactor_(dict_.lookupOrDefault<scalar>("maxRelaxFactor", 0.5)),
relaxFactorT_(1.0),
relaxFactorR_(1.0),
oldRelaxFactorT_(1.0),
oldRelaxFactorR_(1.0),
A_(3, vector::zero),
OmegaDot_(3, vector::zero),
An_(3, vector::zero),
OmegaDotn_(3, vector::zero),
force_(dict_.lookup("force")),
moment_(dict_.lookup("moment")),
curTimeIndex_(-1),
oldStatePtr_(),
translationalConstraints_(),
rotationalConstraints_(),
translationalRestraints_(),
rotationalRestraints_()
{
// Sanity checks
if (mass_.value() < SMALL)
{
FatalIOErrorIn
(
"sixDOFODE::sixDOFODE(const IOobject& io)",
dict_
) << "Zero or negative mass detected: " << mass_.value()
<< nl << "Please check " << dict_.name() << "dictionary."
<< exit(FatalIOError);
}
if (cmptMin(momentOfInertia_.value()) < SMALL)
{
FatalIOErrorIn
(
"sixDOFODE::sixDOFODE(const IOobject& io)",
dict_
) << "Zero or negative moment of inertia detected: "
<< momentOfInertia_.value()
<< nl << "Please check " << dict_.name() << "dictionary."
<< exit(FatalIOError);
}
if
(
(minRelaxFactor_ < SMALL)
|| (maxRelaxFactor_ > 1.0)
|| ((maxRelaxFactor_ - minRelaxFactor_) < 0)
)
{
FatalIOErrorIn
(
"sixDOFODE::sixDOFODE(const IOobject& io)",
dict_
) << "Invalid minRelaxFactor and maxRelaxFactor specified."
<< nl << "Please use values within 0 and 1."
<< exit(FatalIOError);
}
// Read and construct constraints and restraints
// Read translation constraints if they are present
if (dict().found("translationalConstraints"))
{
PtrList<translationalConstraint> tcList
(
dict().lookup("translationalConstraints"),
translationalConstraint::iNew(*this)
);
translationalConstraints_.transfer(tcList);
}
// Read rotation constraints if they are present
if (dict().found("rotationalConstraints"))
{
PtrList<rotationalConstraint> rcList
(
dict().lookup("rotationalConstraints"),
rotationalConstraint::iNew(*this)
);
rotationalConstraints_.transfer(rcList);
}
// Read translation restraints if they are present
if (dict().found("translationalRestraints"))
{
PtrList<translationalRestraint> tcList
(
dict().lookup("translationalRestraints"),
translationalRestraint::iNew(*this)
);
translationalRestraints_.transfer(tcList);
}
// Read rotation restraints if they are present
if (dict().found("rotationalRestraints"))
{
PtrList<rotationalRestraint> rcList
(
dict().lookup("rotationalRestraints"),
rotationalRestraint::iNew(*this)
);
rotationalRestraints_.transfer(rcList);
}
}
Foam::sixDOFODE::sixDOFODE(const word& name, const sixDOFODE& sd)
:
ODE(),
dict_(sd.dict_),
mass_(sd.mass_),
momentOfInertia_(sd.momentOfInertia_),
Xequilibrium_(sd.Xequilibrium_),
aitkensRelaxation_(sd.aitkensRelaxation_),
minRelaxFactor_(sd.minRelaxFactor_),
maxRelaxFactor_(sd.maxRelaxFactor_),
relaxFactorT_(1.0),
relaxFactorR_(1.0),
oldRelaxFactorT_(1.0),
oldRelaxFactorR_(1.0),
A_(3, vector::zero),
OmegaDot_(3, vector::zero),
An_(3, vector::zero),
OmegaDotn_(3, vector::zero),
force_(sd.force_),
moment_(sd.moment_),
curTimeIndex_(sd.curTimeIndex_),
oldStatePtr_(),
translationalConstraints_(sd.translationalConstraints_),
rotationalConstraints_(sd.rotationalConstraints_),
translationalRestraints_(sd.translationalRestraints_),
rotationalRestraints_(sd.rotationalRestraints_)
{}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::sixDOFODE::~sixDOFODE()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
const Foam::OutputControlDictionary<Foam::sixDOFODE>&
Foam::sixDOFODE::dict() const
{
return dict_;
}
bool Foam::sixDOFODE::writeData(Ostream& os) const
{
os.writeKeyword("mass") << tab << mass_ << token::END_STATEMENT << nl;
os.writeKeyword("momentOfInertia") << tab << momentOfInertia_
<< token::END_STATEMENT << nl << nl;
os.writeKeyword("equilibriumPosition") << tab << Xequilibrium_
<< token::END_STATEMENT << nl;
os.writeKeyword("useAitkensRelaxation") << tab << aitkensRelaxation_
<< token::END_STATEMENT << nl;
os.writeKeyword("minRelaxFactor") << tab << minRelaxFactor_
<< token::END_STATEMENT << nl;
os.writeKeyword("maxRelaxFactor") << tab << maxRelaxFactor_
<< token::END_STATEMENT << nl << nl;
os.writeKeyword("force") << tab << force_
<< token::END_STATEMENT << nl;
os.writeKeyword("moment") << tab << moment_
<< token::END_STATEMENT << nl << nl;
if (!translationalConstraints_.empty())
{
os.writeKeyword("translationalConstraints")
<< translationalConstraints_
<< token::END_STATEMENT << nl << endl;
}
if (!rotationalConstraints_.empty())
{
os.writeKeyword("rotationalConstraints")
<< rotationalConstraints_
<< token::END_STATEMENT << endl;
}
if (!translationalRestraints_.empty())
{
os.writeKeyword("translationalRestraints")
<< translationalRestraints_
<< token::END_STATEMENT << nl << endl;
}
if (!rotationalRestraints_.empty())
{
os.writeKeyword("rotationalRestraints")
<< rotationalRestraints_
<< token::END_STATEMENT << endl;
}
return os.good();
}
// ************************************************************************* //

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/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
sixDOFODE
Description
Abstract base class for six-degrees-of-freedom (6DOF) ordinary differential
equations with necessary interface for two-way coupling with CFD solvers.
Holds list of translational and rotational constraints and restraings to be
used in derived classes.
Author
Dubravko Matijasevic, FSB Zagreb. All rights reserved.
Reorganisation by
Vuko Vukcevic, FSB Zagreb. All rights reserved.
Inno Gatin, FSB Zagreb. All rights reserved.
Hrvoje Jasak, FSB Zagreb. All rights reserved.
SourceFiles
sixDOFODEI.H
sixDOFODE.C
newSixDOFODE.C
\*---------------------------------------------------------------------------*/
#ifndef sixDOFODE_H
#define sixDOFODE_H
#include "ODE.H"
#include "dimensionedTypes.H"
#include "autoPtr.H"
#include "OutputControlDictionary.H"
#include "runTimeSelectionTables.H"
#include "Switch.H"
#include "foamTime.H"
#include "constraintsAndRestraints.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class sixDOFODE Declaration
\*---------------------------------------------------------------------------*/
class sixDOFODE
:
public ODE
{
// Private data
//- Dictionary object controlling I/O for sixDOFODE
const OutputControlDictionary<sixDOFODE> dict_;
// Body data
//- Mass
dimensionedScalar mass_;
//- Rotational moment of inertia around centre of mass
// in body (relative) coordinates - aligned with main axes
dimensionedDiagTensor momentOfInertia_;
// Equilibrium position
//- Spring equilibrium position for translation
dimensionedVector Xequilibrium_;
// Aitkens relaxation data members
//- Switch to control whether to use Aitkens relaxation
Switch aitkensRelaxation_;
//- Minimum acceleration relaxation factor (default 0.1)
const scalar minRelaxFactor_;
//- Maximum acceleration relaxation factor (default 0.5)
const scalar maxRelaxFactor_;
//- Translational relaxation factor
scalar relaxFactorT_;
//- Rotational relaxation factor
scalar relaxFactorR_;
//- Old translational relaxation factor
scalar oldRelaxFactorT_;
//- Old rotational relaxation factor
scalar oldRelaxFactorR_;
//- Accelerations from previous iterations
// A_[2] is the old value, A_[1] old old, A_[0] old old old
List<vector> A_;
List<vector> OmegaDot_;
//- Previos iteration non relaxed accelerations
List<vector> An_;
List<vector> OmegaDotn_;
// External forces and moments
//- Force driving the motion in global (inertial) coord. sys.
dimensionedVector force_;
//- Moment driving the motion in global (inertial) coord. sys.
dimensionedVector moment_;
// Private data used to control multiple ODE updates per time step
// Note: Before solving the ODE from the top level, we will store the
// previous state if this is the first update in a given time step. The
// state will be kept as the pointer to sixDOFODE, which is not optimal
// because we are keeping track of some unnecessary data. We could use
// more elegant and efficient code design. VV, 1/Mar/2017.
//- Local time index
label curTimeIndex_;
//- Pointer to the sixDOFODE object carrying old state
autoPtr<sixDOFODE> oldStatePtr_;
// Motion constraints
//- List of translational constraints
PtrList<translationalConstraint> translationalConstraints_;
//- List of rotational constraints
PtrList<rotationalConstraint> rotationalConstraints_;
// Motion restraints
//- List of translational restraints
PtrList<translationalRestraint> translationalRestraints_;
//- List of rotational restraints
PtrList<rotationalRestraint> rotationalRestraints_;
// Private Member Functions
// Copy control
//- Disallow default bitwise copy construct
sixDOFODE(const sixDOFODE&);
//- Disallow default bitwise assignment
void operator=(const sixDOFODE&);
// Aitkens relaxation helper function
//- Update Aitkens relaxation parameters
void updateRelaxFactors();
//- Relax the force (acceleration) using Aitkens or fixed relaxation
void relaxAcceleration();
// Helper function for controlling multiple ODE solver calls per
// time-step
//- Initialise ODE before setting external forces/moments and
// solving
void initState();
//- Calculate current ODE step fraction given time from ODE
inline scalar odeStepFraction(const scalar odeTime) const;
protected:
// Protected Member Functions
// Non-access control for setting state variables
//- Set ODE parameters from another ODE
virtual void setState(const sixDOFODE&);
// Get external force and moment (used during the solution process)
//- Return external force with restraints for given ODE state
dimensionedVector force
(
const scalar t,
const tensor& toRelative,
const vector& x,
const vector& u
) const;
//- Return external moment with restraints given ODE state
dimensionedVector moment
(
const scalar t,
const tensor& toRelative,
const vector& omega
) const;
public:
//- Run-time type information
TypeName("sixDOFODE");
// Declare run-time constructor selection table
declareRunTimeSelectionTable
(
autoPtr,
sixDOFODE,
dictionary,
(const IOobject& io),
(io)
);
// Constructors
//- Construct from dictionary
sixDOFODE(const IOobject& io);
//- Copy construct given new name
sixDOFODE(const word& name, const sixDOFODE& sd);
//- Return a clone, changing the name
virtual autoPtr<sixDOFODE> clone(const word& name) const = 0;
// Selectors
//- Return autoPtr to the selected sixDOFODE
static autoPtr<sixDOFODE> New(const IOobject& io);
// Destructor
virtual ~sixDOFODE();
// Member Functions
// Access to common data
//- Return write controlled dictionary
const OutputControlDictionary<sixDOFODE>& dict() const;
//- Return mass
inline const dimensionedScalar& mass() const;
//- Return access to mass
inline dimensionedScalar& mass();
//- Return moment of inertia
inline const dimensionedDiagTensor& momentOfInertia() const;
//- Return access to moment of inertia
inline dimensionedDiagTensor& momentOfInertia();
//- Return equilibrium position of origin
inline const dimensionedVector& Xequilibrium() const;
//- Return access to equilibrium position of origin
inline dimensionedVector& Xequilibrium();
//- Return linear spring coefficient
inline const dimensionedDiagTensor& linSpringCoeffs() const;
//- Return linear damping coefficient
inline const dimensionedDiagTensor& linDampingCoeffs() const;
// Access to forces and moments
//- Return force in global (inertial) coord. sys.
inline const dimensionedVector& force() const;
//- Return moment in global (inertial) coord. sys.
inline const dimensionedVector& moment() const;
//- Set external force and moment
inline void setExternalForceAndMoment
(
const dimensionedVector& externalForce,
const dimensionedVector& externalMoment
);
//- Initialize force and moment for the first time step
inline void initExternalForceAndMoment
(
const dimensionedVector& externalForce,
const dimensionedVector& externalMoment
);
// Access to motion constraints
//- Return const reference to translational constraints
inline const PtrList<translationalConstraint>&
translationalConstraints() const;
//- Return const reference to rotational constraints
inline const PtrList<rotationalConstraint>&
rotationalConstraints() const;
// Access to motion restraints
//- Return const reference to translational restraints
inline const PtrList<translationalRestraint>&
translationalRestraints() const;
//- Return const reference to rotational restraints
inline const PtrList<rotationalRestraint>&
rotationalRestraints() const;
// Virtual interface for 6DOF motion state
// Variables in relative coordinate system
//- Return displacement in translated coordinate system
// relative to spring equilibrium
virtual const dimensionedVector& Xrel() const = 0;
//- Return rotational velocity in relative coordinate system
virtual const dimensionedVector& omega() const = 0;
// Displacement and velocity in the absolute coordinate system
//- Return position of origin in absolute coordinate system
virtual dimensionedVector X() const = 0;
//- Return velocity of origin
virtual const dimensionedVector& U() const = 0;
//- Return average velocity of origin (evaluated at midstep)
virtual const dimensionedVector& Uaverage() const = 0;
// Average motion per time-step
//- Return average rotational velocity in relative coordinate
// system (evaluated at midstep)
virtual const dimensionedVector& omegaAverage() const = 0;
// Rotations
//- Return rotation tensor to relative coordinate system
virtual tensor toRelative() const = 0;
//- Return rotation tensor to absolute coordinate system
virtual tensor toAbsolute() const = 0;
//- Return transformation tensor between new and previous
// rotation
virtual const tensor& rotIncrementTensor() const = 0;
// ODE parameters
//- Return number of equations
virtual label nEqns() const = 0;
//- Return access to coefficients
virtual scalarField& coeffs() = 0;
//- Return reference to coefficients
virtual const scalarField& coeffs() const = 0;
//- Evaluate derivatives
virtual void derivatives
(
const scalar x,
const scalarField& y,
scalarField& dydx
) const = 0;
//- Evaluate Jacobian
virtual void jacobian
(
const scalar x,
const scalarField& y,
scalarField& dfdx,
scalarSquareMatrix& dfdy
) const = 0;
//- Update ODE after the solution, advancing by delta
virtual void update(const scalar delta) = 0;
// Write control
//- writeData member function required by regIOobject
virtual bool writeData(Ostream&) const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#include "sixDOFODEI.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

159
src/ODE/sixDOF/sixDOFODE/sixDOFODEI.H Normal file
View file

@ -0,0 +1,159 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
sixDOFODE
\*---------------------------------------------------------------------------*/
// * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * * * //
Foam::scalar Foam::sixDOFODE::odeStepFraction(const scalar odeTime) const
{
// Get current global time. Note: assuming that the ODESolver for a given
// time step is integrating from t - deltaT to t.
const scalar globalTime = dict().time().value();
const scalar globalDeltaT = dict().time().deltaT().value();
// Calculate current ODE step time step size
const scalar odeDeltaT = globalDeltaT - (globalTime - odeTime);
// Calculate and return ODE step size fraction
return odeDeltaT/globalDeltaT;
}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
const Foam::dimensionedScalar& Foam::sixDOFODE::mass() const
{
return mass_;
}
Foam::dimensionedScalar& Foam::sixDOFODE::mass()
{
return mass_;
}
const Foam::dimensionedDiagTensor& Foam::sixDOFODE::momentOfInertia() const
{
return momentOfInertia_;
}
Foam::dimensionedDiagTensor& Foam::sixDOFODE::momentOfInertia()
{
return momentOfInertia_;
}
const Foam::dimensionedVector& Foam::sixDOFODE::Xequilibrium() const
{
return Xequilibrium_;
}
Foam::dimensionedVector& Foam::sixDOFODE::Xequilibrium()
{
return Xequilibrium_;
}
const Foam::dimensionedVector& Foam::sixDOFODE::force() const
{
return force_;
}
const Foam::dimensionedVector& Foam::sixDOFODE::moment() const
{
return moment_;
}
void Foam::sixDOFODE::setExternalForceAndMoment
(
const dimensionedVector& externalForce,
const dimensionedVector& externalMoment
)
{
// Initialise the state before setting external forces and moments
initState();
// Set forces and moments
force_ = externalForce;
moment_ = externalMoment;
// Relax acceleration if the Aitkens relaxation is turned on
if (aitkensRelaxation_)
{
relaxAcceleration();
}
}
void Foam::sixDOFODE::initExternalForceAndMoment
(
const dimensionedVector& externalForce,
const dimensionedVector& externalMoment
)
{
// Initialise force and moment only for the first time step
if (curTimeIndex_ == -1)
{
force_ = externalForce;
moment_ = externalMoment;
}
}
const Foam::PtrList<Foam::translationalConstraint>&
Foam::sixDOFODE::translationalConstraints() const
{
return translationalConstraints_;
}
const Foam::PtrList<Foam::rotationalConstraint>&
Foam::sixDOFODE::rotationalConstraints() const
{
return rotationalConstraints_;
}
const Foam::PtrList<Foam::translationalRestraint>&
Foam::sixDOFODE::translationalRestraints() const
{
return translationalRestraints_;
}
const Foam::PtrList<Foam::rotationalRestraint>&
Foam::sixDOFODE::rotationalRestraints() const
{
return rotationalRestraints_;
}
// ************************************************************************* //

16
src/OSspecific/MSWindows/printStack.C
View file

@ -126,7 +126,7 @@ void printSourceFileAndLine
myAddress = nStream.str();
}
if (filename[0] == '/')
if (filename[0] == '/' || filename[1] == ':')
{
string line = pOpen
(
@ -266,7 +266,10 @@ void getSymbolForRaw
const word& address
)
{
if (filename.size() && filename[0] == '/')
if
(
filename.size() && (filename[0] == '/' || filename[1] == ':')
)
{
string fcnt = pOpen
(
@ -316,7 +319,10 @@ void error::printStack(Ostream& os)
string::size_type space = line.rfind(' ') + 1;
fileName libPath = line.substr(space, line.size()-space);
if (libPath.size() && libPath[0] == '/')
if
(
libPath.size() && (libPath[0] == '/' || libPath[1] == ':')
)
{
string offsetString(line.substr(0, line.find('-')));
IStringStream offsetStr(offsetString);
@ -359,10 +365,10 @@ void error::printStack(Ostream& os)
programFile = msg.substr(0, min(spacePos, bracketPos));
// not an absolute path
if (programFile[0] != '/')
if (programFile[0] != '/' && programFile[1] != ':')
{
string tmp = pOpen("which " + programFile);
if (tmp[0] == '/' || tmp[0] == '~')
if (tmp[0] == '/' || tmp[1] == ':' || tmp[0] == '~')
{
programFile = tmp;
}

16
src/OSspecific/POSIX/printStack.C
View file

@ -130,7 +130,7 @@ void printSourceFileAndLine
}
#ifndef darwin
if (filename[0] == '/')
if (filename[0] == '/' || filename[1] == ':')
#else
if (1)
#endif
@ -175,7 +175,10 @@ void getSymbolForRaw
const word& address
)
{
if (filename.size() && filename[0] == '/')
if
(
filename.size() && (filename[0] == '/' || filename[1] == ':')
)
{
string fcnt = pOpen
(
@ -224,7 +227,10 @@ void error::printStack(Ostream& os)
string::size_type space = line.rfind(' ') + 1;
fileName libPath = line.substr(space, line.size()-space);
if (libPath.size() && libPath[0] == '/')
if
(
libPath.size() && (libPath[0] == '/' || libPath[1] == ':')
)
{
string offsetString(line.substr(0, line.find('-')));
IStringStream offsetStr(offsetString);
@ -268,10 +274,10 @@ void error::printStack(Ostream& os)
programFile = msg.substr(0, min(spacePos, bracketPos));
// not an absolute path
if (programFile[0] != '/')
if (programFile[0] != '/' && programFile[1] != ':')
{
string tmp = pOpen("which " + programFile);
if (tmp[0] == '/' || tmp[0] == '~')
if (tmp[0] == '/' || tmp[1] == ':' || tmp[0] == '~')
{
programFile = tmp;
}

1
src/dynamicMesh/dynamicFvMesh/Make/files
View file

@ -10,6 +10,7 @@ dynamicMotionSolverFvMesh/dynamicMotionSolverFvMesh.C
subsetMotionSolverFvMesh/subsetMotionSolverFvMesh.C
dynamicInkJetFvMesh/dynamicInkJetFvMesh.C
dynamicRefineFvMesh/dynamicRefineFvMesh.C
dynamicRefinePolyFvMesh/dynamicRefinePolyFvMesh.C
mixerGgiFvMesh/mixerGgiFvMesh.C
turboFvMesh/turboFvMesh.C

146
src/dynamicMesh/dynamicFvMesh/dynamicRefineFvMesh/dynamicRefineFvMesh.C
View file

@ -31,6 +31,7 @@ License
#include "syncTools.H"
#include "pointFields.H"
#include "directTopoChange.H"
#include "cellSet.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@ -59,7 +60,16 @@ label dynamicRefineFvMesh::count
{
n++;
}
// debug also serves to get-around Clang compiler trying to optimise
// out this forAll loop under O3 optimisation
if (debug)
{
Info<< "n=" << n << endl;
}
}
return n;
}
@ -860,11 +870,78 @@ void dynamicRefineFvMesh::extendMarkedCells(PackedBoolList& markedCell) const
}
void Foam::dynamicRefineFvMesh::checkEightAnchorPoints
(
PackedBoolList& protectedCell,
label& nProtected
) const
{
const labelList& cellLevel = meshCutter_.cellLevel();
const labelList& pointLevel = meshCutter_.pointLevel();
labelList nAnchorPoints(nCells(), 0);
forAll(pointLevel, pointI)
{
const labelList& pCells = pointCells(pointI);
forAll(pCells, pCellI)
{
label cellI = pCells[pCellI];
if (pointLevel[pointI] <= cellLevel[cellI])
{
// Check if cell has already 8 anchor points -> protect cell
if (nAnchorPoints[cellI] == 8)
{
if (protectedCell.set(cellI, true))
{
nProtected++;
}
}
if (!protectedCell[cellI])
{
nAnchorPoints[cellI]++;
}
}
}
}
forAll(protectedCell, cellI)
{
if (!protectedCell[cellI] && nAnchorPoints[cellI] != 8)
{
protectedCell.set(cellI, true);
nProtected++;
}
}
}
// * * * * * * * * * * * * * * * * Constructors * * * * * * * * * * * * * * //
dynamicRefineFvMesh::dynamicRefineFvMesh(const IOobject& io)
:
dynamicFvMesh(io),
singleMotionUpdate_
(
IOdictionary
(
IOobject
(
"dynamicMeshDict",
time().constant(),
*this,
IOobject::MUST_READ,
IOobject::NO_WRITE,
false
)
).subDict(typeName + "Coeffs")
.lookupOrDefault<Switch>("singleMotionUpdate", true)
),
curTimeIndex_(-1),
meshCutter_(*this),
dumpLevel_(false),
nRefinementIterations_(0),
@ -984,12 +1061,63 @@ dynamicRefineFvMesh::dynamicRefineFvMesh(const IOobject& io)
nProtected++;
}
}
// Also protect any cells that are less than hex
forAll(cells(), cellI)
{
const cell& cFaces = cells()[cellI];
if (cFaces.size() < 6)
{
if (protectedCell_.set(cellI, 1))
{
nProtected++;
}
}
else
{
forAll(cFaces, cFaceI)
{
if (faces()[cFaces[cFaceI]].size() < 4)
{
if (protectedCell_.set(cellI, 1))
{
nProtected++;
}
break;
}
}
}
}
// Check cells for 8 corner points
checkEightAnchorPoints(protectedCell_, nProtected);
}
if (returnReduce(nProtected, sumOp<label>()) == 0)
{
protectedCell_.clear();
}
else
{
cellSet protectedCells(*this, "protectedCells", nProtected);
forAll(protectedCell_, cellI)
{
if (protectedCell_[cellI])
{
protectedCells.insert(cellI);
}
}
Info<< "Detected " << returnReduce(nProtected, sumOp<label>())
<< " cells that are protected from refinement."
<< " Writing these to cellSet "
<< protectedCells.name()
<< "." << endl;
protectedCells.write();
}
}
@ -1003,6 +1131,20 @@ dynamicRefineFvMesh::~dynamicRefineFvMesh()
bool dynamicRefineFvMesh::update()
{
// Handling multiple calls in a single time step
if
(
singleMotionUpdate_
&& curTimeIndex_ == this->time().timeIndex()
)
{
// This is not the first call to update, simply return false
return false;
}
// Update local time index
curTimeIndex_ = this->time().timeIndex();
// Re-read dictionary. Choosen since usually -small so trivial amount
// of time compared to actual refinement. Also very useful to be able
// to modify on-the-fly.
@ -1071,9 +1213,9 @@ bool dynamicRefineFvMesh::update()
<< exit(FatalError);
}
word field(refineDict.lookup("field"));
const word fieldName(refineDict.lookup("field"));
const volScalarField& vFld = lookupObject<volScalarField>(field);
const volScalarField& vFld = lookupObject<volScalarField>(fieldName);
const scalar lowerRefineLevel =
readScalar(refineDict.lookup("lowerRefineLevel"));

20
src/dynamicMesh/dynamicFvMesh/dynamicRefineFvMesh/dynamicRefineFvMesh.H
View file

@ -55,6 +55,20 @@ class dynamicRefineFvMesh
:
public dynamicFvMesh
{
// Private data
// Helper variables to enable switching between a single and multiple
// mesh motion updates within a time step (if update() is called more
// than once in a single time step)
//- Switch for single motion update (true by default)
Switch singleMotionUpdate_;
//- Helper varaible: current time index
label curTimeIndex_;
protected:
//- Mesh cutting engine
@ -148,6 +162,12 @@ protected:
//- Extend markedCell with cell-face-cell.
void extendMarkedCells(PackedBoolList& markedCell) const;
//- Check all cells have 8 anchor points
void checkEightAnchorPoints
(
PackedBoolList& protectedCell,
label& nProtected
) const;
private:

77
src/dynamicMesh/dynamicFvMesh/dynamicRefinePolyFvMesh/dynamicMeshDict Normal file
View file

@ -0,0 +1,77 @@
/*--------------------------------*- C++ -*----------------------------------*\
| ========= | |
| \\ / F ield | foam-extend: Open Source CFD |
| \\ / O peration | Version: 4.0 |
| \\ / A nd | Web: http://www.foam-extend.org |
| \\/ M anipulation | |
\*---------------------------------------------------------------------------*/
FoamFile
{
version 2.0;
format ascii;
class dictionary;
object dynamicMeshDict;
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
//dynamicFvMeshLib "libtopoChangerFvMesh.so";
dynamicFvMesh dynamicRefinePolyFvMesh;
//staticFvMesh;
mixerFvMeshCoeffs
{
coordinateSystem
{
type cylindrical;
origin (0 0 0);
axis (0 0 1);
direction (1 0 0);
}
rpm 10;
slider
{
inside insideSlider;
outside outsideSlider;
}
}
// Refinement
dynamicRefineFvMeshCoeffs
{
// Refine every refineInterval timesteps
refineInterval 3;
// Maximum refinement level (starts from 0)
maxRefinement 2;
// Maximum cell limit (approximate)
maxCells 1000000;
// volScalarField to base refinement on
field gamma;
// Which cells to un/refine: based on point values (simple averaging).
// - refine pointCells of point value inbetween minLevel..maxLevel
// - unrefine pointCells that are within nBufferLayers of points marked
// for refinement.
minLevel 0.01;
maxLevel 0.99;
nBufferLayers 1;
// Newly introduced patch points optionally get projected onto a surface
//projectSurfaces ("fixedWalls4.stl");
//projectPatches (fixedWalls);
// Maximum project distance
//projectDistance 1;
// Fluxes to adapt. For newly created faces or split faces the flux
// gets estimated from an interpolated volVectorField ('velocity')
// First is name of the flux to adapt, second is velocity that will
// be interpolated and inner-producted with the face area vector.
correctFluxes ((phi U));
}
// ************************************************************************* //

1035
src/dynamicMesh/dynamicFvMesh/dynamicRefinePolyFvMesh/dynamicRefinePolyFvMesh.C Normal file
View file

File diff suppressed because it is too large Load diff

215
src/dynamicMesh/dynamicFvMesh/dynamicRefinePolyFvMesh/dynamicRefinePolyFvMesh.H Normal file
View file

@ -0,0 +1,215 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::dynamicRefinePolyFvMesh
Description
A fvMesh with built-in refinement of arbitrary polyhedral cells.
Determines which cells to refine/unrefine and does all in update().
SourceFiles
dynamicRefinePolyFvMesh.C
Author
Vuko Vukcevic, Wikki Ltd. All rights reserved
Notes
Generalisation of dynamicRefineMesh for polyhedral cells
\*---------------------------------------------------------------------------*/
#ifndef dynamicRefinePolyFvMesh_H
#define dynamicRefinePolyFvMesh_H
#include "dynamicFvMesh.H"
#include "polyRef.H"
#include "PackedBoolList.H"
#include "Switch.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class dynamicRefinePolyFvMesh Declaration
\*---------------------------------------------------------------------------*/
class dynamicRefinePolyFvMesh
:
public dynamicFvMesh
{
// Private data
// Helper variables to enable switching between a single and multiple
// mesh motion updates within a time step (if update() is called more
// than once in a single time step)
//- Switch for single motion update (true by default)
Switch singleMotionUpdate_;
//- Helper varaible: current time index
label curTimeIndex_;
protected:
//- Mesh cutting engine
polyRef meshCutter_;
//- Dump cellLevel for postprocessing
Switch dumpLevel_;
//- Fluxes to map
List<Pair<word> > correctFluxes_;
//- Number of refinement/unrefinement steps done so far.
label nRefinementIterations_;
// Private Member Functions
//- Count set/unset elements in packedlist.
static label count(const PackedBoolList&, const unsigned int);
//- Read the projection parameters from dictionary
void readDict();
//- Refine cells. Update mesh and fields.
autoPtr<mapPolyMesh> refine(const labelList&);
//- Unrefine cells. Gets passed in centre points of cells to combine.
autoPtr<mapPolyMesh> unrefine(const labelList&);
// Selection of cells to un/refine
//- Get per cell max of connected point
scalarField maxPointField(const scalarField&) const;
//- Get point min of connected cell
scalarField minCellField(const volScalarField&) const;
//- Simple (non-parallel) interpolation by averaging
scalarField cellToPoint(const scalarField& vFld) const;
//- Calculate error (= -1 by default or distance from inbetween
// levels
scalarField error
(
const scalarField& fld,
const scalar minLevel,
const scalar maxLevel
) const;
//- Select candidate cells for refinement
virtual void selectRefineCandidates
(
const scalar lowerRefineLevel,
const scalar upperRefineLevel,
const scalarField& vFld,
PackedBoolList& candidateCell
) const;
//- Subset candidate cells for refinement
virtual labelList selectRefineCells
(
const label maxCells,
const label maxRefinement,
const PackedBoolList& candidateCell
) const;
//- Select points that can be unrefined
virtual labelList selectUnrefinePoints
(
const scalar unrefineLevel,
const PackedBoolList& markedCell,
const scalarField& pFld
) const;
//- Extend markedCell with cell-face-cell
void extendMarkedCells(PackedBoolList& markedCell) const;
private:
//- Disallow default bitwise copy construct
dynamicRefinePolyFvMesh(const dynamicRefinePolyFvMesh&);
//- Disallow default bitwise assignment
void operator=(const dynamicRefinePolyFvMesh&);
public:
//- Runtime type information
TypeName("dynamicRefinePolyFvMesh");
// Constructors
//- Construct from IOobject
explicit dynamicRefinePolyFvMesh(const IOobject& io);
// Destructor
virtual ~dynamicRefinePolyFvMesh();
// Member Functions
//- Direct access to the refinement engine
const polyRef& meshCutter() const
{
return meshCutter_;
}
//- Update the mesh for both mesh motion and topology change
virtual bool update();
// Writing
//- Write using given format, version and compression
virtual bool writeObject
(
IOstream::streamFormat fmt,
IOstream::versionNumber ver,
IOstream::compressionType cmp
) const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

2
src/dynamicMesh/dynamicMesh/Make/files
View file

@ -52,6 +52,7 @@ motionSolver/motionSolver.C
refinementData/refinementData.C
refinementData/refinementDistanceData.C
refinementData/refinementHistory.C
refinementData/polyRefinementHistory.C
directTopoChange/directTopoChange/directTopoChange.C
@ -60,6 +61,7 @@ $(directActions)/addPatchCellLayer.C
$(directActions)/edgeCollapser.C
$(directActions)/faceCollapser.C
$(directActions)/hexRef8.C
$(directActions)/polyRef.C
$(directActions)/removeCells.C
$(directActions)/removeFaces.C
$(directActions)/removePoints.C

10
src/dynamicMesh/dynamicMesh/directTopoChange/directTopoChange/directActions/hexRef8.C
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@ -353,6 +353,16 @@ void Foam::hexRef8::modFace
// Bit complex way to determine the unrefined edge length.
Foam::scalar Foam::hexRef8::getLevel0EdgeLength() const
{
if (cellLevel_.size() != mesh_.nCells())
{
FatalErrorIn("scalar hexRef8::getLevel0EdgeLength() const")
<< "Number of cells in mesh:" << mesh_.nCells()
<< " does not equal size of cellLevel:" << cellLevel_.size()
<< endl
<< "This might be because of a restart with inconsistent cellLevel."
<< abort(FatalError);
}
// Determine minimum edge length per refinement level
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

5473
src/dynamicMesh/dynamicMesh/directTopoChange/directTopoChange/directActions/polyRef.C Normal file
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558
src/dynamicMesh/dynamicMesh/directTopoChange/directTopoChange/directActions/polyRef.H Normal file
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@ -0,0 +1,558 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::polyRef
Description
Refinement of (split) polyhedra using directTopoChange.
Each polyhedron is split by the following procedure:
1. Adding points at the edge centre, face centre and cell centre,
2. Adding cells n cells where n is the number of points of the cell,
3. Splitting each face into multiple faces going from:
existing corner point -> new edge centre point -> new face centre
point -> other new edge centre point (sharing the same corner point)
4. Adding internal faces going from:
new edge centre point -> new face centre point -> new cell centre
point -> other new face centre point (sharing the same edge)
SourceFiles
polyRef.C
Author
Vuko Vukcevic, Wikki Ltd. All rights reserved.
Notes
Generalisation of hexRef8 for polyhedral cells
\*---------------------------------------------------------------------------*/
#ifndef polyRef_H
#define polyRef_H
#include "labelIOList.H"
#include "face.H"
#include "HashSet.H"
#include "DynamicList.H"
#include "primitivePatch.H"
#include "removeFaces.H"
#include "polyRefinementHistory.H"
#include "PackedList.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
// Forward declaration of classes
class polyMesh;
class polyPatch;
class directTopoChange;
class mapPolyMesh;
class mapDistributePolyMesh;
/*---------------------------------------------------------------------------*\
Class polyRef Declaration
\*---------------------------------------------------------------------------*/
class polyRef
{
// Private data
//- Reference to underlying mesh
const polyMesh& mesh_;
//- Per cell the refinement level
labelIOList cellLevel_;
//- Per point the refinement level
labelIOList pointLevel_;
//- Typical edge length between unrefined points
const scalar level0Edge_;
//- Refinement history
polyRefinementHistory history_;
//- Face remover engine
removeFaces faceRemover_;
//- Level of saved points
Map<label> savedPointLevel_;
//- Level of saved cells
Map<label> savedCellLevel_;
// Private Member Functions
//- Reorder according to map
static void reorder
(
const labelList& map,
const label len,
const label null,
labelList& elems
);
//- Get patch and zone info
void getFaceInfo
(
const label faceI,
label& patchID,
label& zoneID,
label& zoneFlip
) const;
//- Adds a face on top of existing faceI. Reverses if nessecary
label addFace
(
directTopoChange& meshMod,
const label faceI,
const face& newFace,
const label own,
const label nei
) const;
//- Adds internal face from point. No checks on reversal
label addInternalFace
(
directTopoChange& meshMod,
const label meshFaceI,
const label meshPointI,
const face& newFace,
const label own,
const label nei
) const;
//- Modifies existing faceI for either new owner/neighbour or new face
// points. Reverses if nessecary
void modFace
(
directTopoChange& meshMod,
const label faceI,
const face& newFace,
const label own,
const label nei
) const;
scalar getLevel0EdgeLength() const;
//- Get cell added to point of cellI (if any)
label getAnchorCell
(
const labelListList& cellAnchorPoints,
const labelListList& cellAddedCells,
const label cellI,
const label faceI,
const label pointI
) const;
//- Get new owner and neighbour (in unspecified order) of pointI
// on faceI
void getFaceNeighbours
(
const labelListList& cellAnchorPoints,
const labelListList& cellAddedCells,
const label faceI,
const label pointI,
label& own,
label& nei
) const;
//- Get index of point with minimum pointlevel
label findMinLevel(const labelList& f) const;
//- Get index of point with maximum pointlevel
label findMaxLevel(const labelList& f) const;
//- Count number of vertices <= anchorLevel
label countAnchors(const labelList&, const label) const;
//- Find index of point with wantedLevel, starting from fp
label findLevel
(
const face& f,
const label startFp,
const bool searchForward,
const label wantedLevel
) const;
////- Print levels of list of points.
//void printLevels(Ostream&, const labelList&) const;
//- debug: check orientation of added internal face
static void checkInternalOrientation
(
directTopoChange& meshMod,
const label cellI,
const label faceI,
const point& ownPt,
const point& neiPt,
const face& newFace
);
//- debug: check orientation of new boundary face
static void checkBoundaryOrientation
(
directTopoChange& meshMod,
const label cellI,
const label faceI,
const point& ownPt,
const point& boundaryPt,
const face& newFace
);
//- If p0 and p1 are existing vertices check if edge is split and insert
// splitPoint
void insertEdgeSplit
(
const labelList& edgeMidPoint,
const label p0,
const label p1,
dynamicLabelList& verts
) const;
//- Store in maps correspondence from midpoint to anchors and faces
label storeMidPointInfo
(
const labelListList& cellAnchorPoints,
const labelListList& cellAddedCells,
const labelList& cellMidPoint,
const labelList& edgeMidPoint,
const label cellI,
const label faceI,
const bool faceOrder,
const label midPointI,
const label anchorPointI,
const label faceMidPointI,
Map<edge>& midPointToAnchors,
Map<edge>& midPointToFaceMids,
directTopoChange& meshMod
) const;
//- Create all internal faces from an unsplit face
void createInternalFromSplitFace
(
const labelListList& cellAnchorPoints,
const labelListList& cellAddedCells,
const labelList& cellMidPoint,
const labelList& faceMidPoint,
const labelList& edgeMidPoint,
const label cellI,
const label faceI,
Map<edge>& midPointToAnchors,
Map<edge>& midPointToFaceMids,
directTopoChange& meshMod,
label& nFacesAdded
) const;
//- Create all internal faces to split cellI into n cells where n is the
// number of cell points
void createInternalFaces
(
const labelListList& cellAnchorPoints,
const labelListList& cellAddedCells,
const labelList& cellMidPoint,
const labelList& faceMidPoint,
const labelList& faceAnchorLevel,
const labelList& edgeMidPoint,
const label cellI,
directTopoChange& meshMod
) const;
//- Store vertices from startFp upto face split point.
// Used when splitting face into n faces where n is the number of
// points in a face (or number of edges)
void walkFaceToMid
(
const labelList& edgeMidPoint,
const label cLevel,
const label faceI,
const label startFp,
dynamicLabelList& faceVerts
) const;
//- Same as walkFaceToMid but now walk back
void walkFaceFromMid
(
const labelList& edgeMidPoint,
const label cLevel,
const label faceI,
const label startFp,
dynamicLabelList& faceVerts
) const;
//- Updates refineCell so consistent 2:1 refinement. Returns local
// number of cells changed
label faceConsistentRefinement
(
const bool maxSet,
PackedList<1>& refineCell
) const;
//- Check wanted refinement for 2:1 consistency
void checkWantedRefinementLevels(const labelList&) const;
// Copy control
//- Disallow default bitwise copy construct
polyRef(const polyRef&);
//- Disallow default bitwise assignment
void operator=(const polyRef&);
public:
//- Runtime type information
ClassName("polyRef");
// Constructors
//- Construct from mesh, read_if_present refinement data
// (from write below)
polyRef(const polyMesh& mesh);
//- Construct from mesh and un/refinement data
polyRef
(
const polyMesh& mesh,
const labelList& cellLevel,
const labelList& pointLevel,
const polyRefinementHistory& history
);
//- Construct from mesh and refinement data.
polyRef
(
const polyMesh& mesh,
const labelList& cellLevel,
const labelList& pointLevel
);
// Member Functions
// Access
const labelIOList& cellLevel() const
{
return cellLevel_;
}
const labelIOList& pointLevel() const
{
return pointLevel_;
}
const polyRefinementHistory& history() const
{
return history_;
}
//- Typical edge length between unrefined points
scalar level0EdgeLength() const
{
return level0Edge_;
}
// Refinement
// Get cell level such that the face has the most points that are
// <= level (at least three points)
label getAnchorLevel(const label faceI) const;
//- Helper: get points of a cell without using cellPoints addressing
labelList cellPoints(const label cellI) const;
//- Given valid mesh and current cell level and proposed
// cells to refine calculate any clashes (due to 2:1) and return
// ok list of cells to refine.
// Either adds cells to refine to set (maxSet = true) or
// removes cells to refine (maxSet = false)
labelList consistentRefinement
(
const labelList& cellsToRefine,
const bool maxSet
) const;
//- Like consistentRefinement but slower:
// - specify number of cells between consecutive refinement levels
// (consistentRefinement equivalent to 1)
// - specify max level difference between point-connected cells.
// (-1 to disable). Note that with normal 2:1 limitation
// (maxFaceDiff=1) there can be 8:1 size difference across point
// connected cells so maxPointDiff allows you to make that less.
// cellsToRefine : cells we're thinking about refining. It will
// extend this set. All refinement levels will be
// at least maxFaceDiff layers thick.
// facesToCheck : additional faces where to implement the
// maxFaceDiff thickness (usually only boundary
// faces)
labelList consistentSlowRefinement
(
const label maxFaceDiff,
const labelList& cellsToRefine,
const labelList& facesToCheck,
const label maxPointDiff,
const labelList& pointsToCheck
) const;
//- Like consistentSlowRefinement but uses different meshWave
// (proper distance instead of toplogical count). No point checks
// yet
labelList consistentSlowRefinement2
(
const label maxFaceDiff,
const labelList& cellsToRefine,
const labelList& facesToCheck
) const;
//- Insert refinement. All selected cells will be split into n cells
// where n is the number of points per cell.
// Returns per element in cells the n cells they were split into.
// Guarantees that the 0th element is the original cell label.
// Mapping:
// -split cells: n new ones get added from original
// -split faces: original gets modified; n - 1 new ones get added
// from original
// -added internal faces: added from original cell face (if
// that was internal) or created out-of-nothing (so will not
// get mapped!). Note: could make this inflate from point but
// that will allocate interpolation.
// -points added to split edge: added from edge start()
// -midpoints added: added from cellPoints[0].
labelListList setRefinement
(
const labelList& cells,
directTopoChange&
);
//- Update local numbering for changed mesh
void updateMesh(const mapPolyMesh&);
// Restoring : is where other processes delete and reinsert data.
// These callbacks allow this to restore the cellLevel
// and pointLevel for reintroduced points.
// Is not related to undoing my refinement
//- Signal points/face/cells for which to store data
void storeData
(
const labelList& pointsToStore,
const labelList& facesToStore,
const labelList& cellsToStore
);
//- Update local numbering + undo
// Data to restore given as new pointlabel + stored pointlabel
// (i.e. what was in pointsToStore)
void updateMesh
(
const mapPolyMesh&,
const Map<label>& pointsToRestore,
const Map<label>& facesToRestore,
const Map<label>& cellsToRestore
);
//- Update local numbering for subsetted mesh.
// Gets new-to-old maps. Not compatible with unrefinement.
void subset
(
const labelList& pointMap,
const labelList& faceMap,
const labelList& cellMap
);
//- Update local numbering for mesh redistribution
void distribute(const mapDistributePolyMesh&);
//- Debug: Check coupled mesh for correctness
void checkMesh() const;
//- Debug: Check 2:1 consistency across faces.
// maxPointDiff==-1 : only check 2:1 across faces
// maxPointDiff!=-1 : check point-connected cells.
void checkRefinementLevels
(
const label maxPointDiff,
const labelList& pointsToCheck
) const;
// Unrefinement (undoing refinement, not arbitrary coarsening)
//- Return the points at the centre of top-level split cells
// that can be unsplit.
labelList getSplitPoints() const;
//- Given proposed splitPoints to unrefine according to calculate
// any clashes (due to 2:1) and return ok list of points to
// unrefine. Either adds points to refine to set (maxSet = true)
// or removes points to refine (maxSet = false)
labelList consistentUnrefinement
(
const labelList& pointsToUnrefine,
const bool maxSet
) const;
//- Remove some refinement. Needs to be supplied output of
// consistentUnrefinement. Only call if undoable set.
// All n pointCells of a split point will be combined into
// the lowest numbered cell of those n.
void setUnrefinement
(
const labelList& splitPointLabels,
directTopoChange&
);
// Write
// Set instance for mesh files
void setInstance(const fileName& inst);
//- Force writing refinement+history to polyMesh directory.
bool write() const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

1160
src/dynamicMesh/dynamicMesh/refinementData/polyRefinementHistory.C Normal file
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378
src/dynamicMesh/dynamicMesh/refinementData/polyRefinementHistory.H Normal file
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@ -0,0 +1,378 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::polyRefinementHistory
Description
All refinement history. Used in unrefinement.
- visibleCells: valid for the current mesh and contains per cell -1
(cell unrefined) or an index into splitCells_.
- splitCells: for every split contains the parent (also index into
splitCells) and optionally a subsplit as n indices into splitCells, where
n is the number of points of a cell. Note that the numbers in splitCells
are not cell labels, they are purely indices into splitCells.
E.g. 2 cells, cell 1 gets refined so end up with 9 cells:
@verbatim
// splitCells
9
(
-1 (1 2 3 4 5 6 7 8)
0 0()
0 0()
0 0()
0 0()
0 0()
0 0()
0 0()
0 0()
)
// visibleCells
9(-1 1 2 3 4 5 6 7 8)
@endverbatim
So cell0 (visibleCells=-1) is unrefined.
Cells 1-8 have all valid splitCells entries which are:
- parent:0
- subsplits:0()
The parent 0 refers back to the splitcell entries.
SourceFiles
polyRefinementHistory.C
Author
Vuko Vukcevic, Wikki Ltd. All rights reserved
Notes
Generalisation of refinementHistory for polyhedral cells
\*---------------------------------------------------------------------------*/
#ifndef polyRefinementHistory_H
#define polyRefinementHistory_H
#include "DynamicList.H"
#include "dynamicLabelList.H"
#include "labelList.H"
#include "FixedList.H"
#include "SLList.H"
#include "autoPtr.H"
#include "regIOobject.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
// Forward declaration of classes
class mapPolyMesh;
class mapDistributePolyMesh;
/*---------------------------------------------------------------------------*\
Class polyRefinementHistory Declaration
\*---------------------------------------------------------------------------*/
class polyRefinementHistory
:
public regIOobject
{
public:
class splitPolyCell
{
public:
// Index to original splitCell this cell was refined off from
// -1: top level cell
// -2: free splitCell (so should also be in freeSplitCells_)
label parent_;
//- cells this cell was refined into
autoPtr<labelList> addedCellsPtr_;
//- Construct null (parent = -1)
splitPolyCell();
//- Construct from parent
splitPolyCell(const label parent);
//- Construct from Istream
splitPolyCell(Istream& is);
//- Construct as deep copy
splitPolyCell(const splitPolyCell&);
//- Copy operator since autoPtr otherwise 'steals' storage.
void operator=(const splitPolyCell& s)
{
// Check for assignment to self
if (this == &s)
{
FatalErrorIn
(
"splitPolyCell::operator=(const Foam::splitPolyCell&)"
) << "Attempted assignment to self"
<< abort(FatalError);
}
parent_ = s.parent_;
addedCellsPtr_.reset
(
s.addedCellsPtr_.valid()
? new labelList(s.addedCellsPtr_())
: NULL
);
}
bool operator==(const splitPolyCell& s) const
{
if (addedCellsPtr_.valid() != s.addedCellsPtr_.valid())
{
return false;
}
else if (parent_ != s.parent_)
{
return false;
}
else if (addedCellsPtr_.valid())
{
return addedCellsPtr_() == s.addedCellsPtr_();
}
else
{
return true;
}
}
bool operator!=(const splitPolyCell& s) const
{
return !operator==(s);
}
friend Istream& operator>>(Istream&, splitPolyCell&);
friend Ostream& operator<<(Ostream&, const splitPolyCell&);
};
private:
TypeName("polyRefinementHistory");
// Private data
//- Storage for splitCells
DynamicList<splitPolyCell> splitCells_;
//- Unused indices in splitCells
dynamicLabelList freeSplitCells_;
//- Currently visible cells. Indices into splitCells.
labelList visibleCells_;
// Private member functions
//- Debug write
static void writeEntry
(
const List<splitPolyCell>&,
const splitPolyCell&
);
//- Debug write
static void writeDebug
(
const labelList&,
const List<splitPolyCell>&
);
//- Check consistency of structure, i.e. indices into splitCells_.
void checkIndices() const;
//- Allocate a splitCell. Return index in splitCells_.
label allocateSplitCell
(
const label parent,
const label i,
const label nCells
);
//- Free a splitCell.
void freeSplitCell(const label index);
//- Mark entry in splitCells. Recursively mark its parent and subs.
void markSplit
(
const label,
labelList& oldToNew,
DynamicList<splitPolyCell>&
) const;
void countProc
(
const label index,
const label newProcNo,
labelList& splitCellProc,
labelList& splitCellNum
) const;
public:
// Constructors
//- Construct (read) given an IOobject
polyRefinementHistory(const IOobject&);
//- Construct (read) or construct null
polyRefinementHistory
(
const IOobject&,
const List<splitPolyCell>& splitCells,
const labelList& visibleCells
);
//- Construct (read) or construct from initial number of cells
// (all visible)
polyRefinementHistory(const IOobject&, const label nCells);
//- Construct as copy
polyRefinementHistory(const IOobject&, const polyRefinementHistory&);
//- Construct from Istream
polyRefinementHistory(const IOobject&, Istream&);
// Member Functions
//- Per cell in the current mesh (i.e. visible) either -1 (unrefined)
// or an index into splitCells.
const labelList& visibleCells() const
{
return visibleCells_;
}
//- Storage for splitPolyCells.
const DynamicList<splitPolyCell>& splitCells() const
{
return splitCells_;
}
//- Cache of unused indices in splitCells
const dynamicLabelList& freeSplitCells() const
{
return freeSplitCells_;
}
//- Is there unrefinement history. Note that this will fall over if
// there are 0 cells in the mesh. But this gives problems with
// lots of other programs anyway.
bool active() const
{
return visibleCells_.size() > 0;
}
//- Get parent of cell
label parentIndex(const label cellI) const
{
label index = visibleCells_[cellI];
if (index < 0)
{
FatalErrorIn("polyRefinementHistory::parentIndex(const label)")
<< "Cell " << cellI << " is not visible"
<< abort(FatalError);
}
return splitCells_[index].parent_;
}
//- Store splitting of cell into n (number of points for a cell)
void storeSplit
(
const label cellI,
const labelList& addedCells
);
//- Store combining n cells into master
void combineCells
(
const label masterCellI,
const labelList& combinedCells
);
//- Update numbering for mesh changes
void updateMesh(const mapPolyMesh&);
//- Update numbering for subsetting
void subset
(
const labelList& pointMap,
const labelList& faceMap,
const labelList& cellMap
);
//- Update local numbering for mesh redistribution.
// Can only distribute clusters sent across in one go; cannot
// handle parts recombined in multiple passes.
void distribute(const mapDistributePolyMesh&);
//- Compact splitCells_. Removes all freeSplitCells_ elements.
void compact();
//- Extend/shrink storage. additional visibleCells_ elements get
// set to -1.
void resize(const label nCells);
//- Debug write
void writeDebug() const;
//- ReadData function required for regIOobject read operation
virtual bool readData(Istream&);
//- WriteData function required for regIOobject write operation
virtual bool writeData(Ostream&) const;
// IOstream Operators
friend Istream& operator>>(Istream&, polyRefinementHistory&);
friend Ostream& operator<<(Ostream&, const polyRefinementHistory&);
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

2
src/dynamicMesh/dynamicMesh/refinementData/refinementHistory.H
View file

@ -28,7 +28,7 @@ Description
All refinement history. Used in unrefinement.
- visibleCells: valid for the current mesh and contains per cell -1
(cell unrefined) or an index into splitCells_.
(cell unrefined) or an index into splitCells_.
- splitCells: for every split contains the parent (also index into
splitCells) and optionally a subsplit as 8 indices into splitCells.
Note that the numbers in splitCells are not cell labels, they are purely

2
src/dynamicMesh/meshMotion/solidBodyMotion/solidBodyMotionFunction/solidBodyMotionFunction.H
View file

@ -64,7 +64,7 @@ protected:
// Protected data
//- Solid bodi motion coefficients dictionary
//- Solid body motion coefficients dictionary
dictionary SBMFCoeffs_;
//- Time

5
src/finiteArea/faMatrices/faMatrix/faMatrix.C
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@ -419,12 +419,13 @@ void faMatrix<Type>::setValues
}
else
{
label patchi = mesh.boundary().whichPatch(edgei);
const label& curEdgeIndex = mesh.edgeIndex()[edgei];
label patchi = mesh.boundary().whichPatch(curEdgeIndex);
if (internalCoeffs_[patchi].size())
{
label patchEdgei =
mesh.boundary()[patchi].whichEdge(edgei);
mesh.boundary()[patchi].whichEdge(curEdgeIndex);
internalCoeffs_[patchi][patchEdgei] =
pTraits<Type>::zero;

7
src/finiteArea/faMesh/faMesh.C
View file

@ -71,6 +71,7 @@ void Foam::faMesh::setPrimitiveMeshData()
// Set faMesh edges
edges_.setSize(bp.nEdges());
edgeIndex_.setSize(bp.nEdges());
label edgeI = -1;
@ -80,6 +81,7 @@ void Foam::faMesh::setPrimitiveMeshData()
for (label curEdge = 0; curEdge < nIntEdges; curEdge++)
{
edges_[++edgeI] = bp.edges()[curEdge];
edgeIndex_[curEdge] = edgeI;
}
forAll (boundary(), patchI)
@ -89,6 +91,7 @@ void Foam::faMesh::setPrimitiveMeshData()
forAll (curP, eI)
{
edges_[++edgeI] = bp.edges()[curP[eI]];
edgeIndex_[curP[eI]] = edgeI;
}
}
@ -259,7 +262,7 @@ Foam::faMesh::faMesh(const polyMesh& pMesh)
// Calculate the geometry for the patches (transformation tensors etc.)
boundary_.calcGeometry();
if (isFile(pMesh.time().timePath()/"S0"))
if (isFile(pMesh.time().timePath()/pMesh.dbDir()/"S0"))
{
S0Ptr_ = new DimensionedField<scalar, areaMesh>
(
@ -808,7 +811,7 @@ Foam::faMesh::faMesh
// Calculate the geometry for the patches (transformation tensors etc.)
boundary_.calcGeometry();
if (isFile(mesh().time().timePath()/"S0"))
if (isFile(mesh().time().timePath()/mesh().dbDir()/"S0"))
{
S0Ptr_ = new DimensionedField<scalar, areaMesh>
(

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