hydrofil case update

tutorials/surfaceTracking/interTrackFoam/hydrofoil/constant/polyMesh/boundary

@@ -1,22 +1,16 @@
-/*---------------------------------------------------------------------------*\
+/*--------------------------------*- C++ -*----------------------------------*\
 | =========                 |                                                 |
-| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
+| \\      /  F ield         | OpenFOAM Extend Project: Open source CFD        |
-|  \\    /   O peration     | Version:  1.1                                   |
+|  \\    /   O peration     | Version:  1.6-ext                               |
-|   \\  /    A nd           | Web:      http://www.openfoam.org               |
+|   \\  /    A nd           | Web:      www.extend-project.de                 |
 |    \\/     M anipulation  |                                                 |
 \*---------------------------------------------------------------------------*/
-
 FoamFile
 {
     version     2.0;
     format      ascii;
-
-    root "/home/ztukovic/OpenFOAM/ztukovic-1.1/run/PhDRun/hydrofoil";
-    case "hydrofoil-buffer";
-    instance "constant";
-    local "polyMesh";
-
     class       polyBoundaryMesh;
+    location    "constant/polyMesh";
     object      boundary;
 }
 

tutorials/surfaceTracking/interTrackFoam/ramp/0/U

@@ -0,0 +1,57 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM Extend Project: Open source CFD        |
+|  \\    /   O peration     | Version:  1.6-ext                               |
+|   \\  /    A nd           | Web:      www.extend-project.de                 |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+FoamFile
+{
+    version         2.0;
+    format          ascii;
+    class           volVectorField;
+    location        "0";
+    object          U;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+dimensions          [0 1 -1 0 0 0 0];
+
+internalField       uniform (6 0 0);
+
+referenceLevel      (0 0 0);
+
+boundaryField
+{
+    walls
+    {
+//         type slip;
+        type fixedValue;
+        value uniform (0 0 0);
+    }
+
+    freeSurface
+    {
+        type fixedGradient;
+        gradient uniform (0 0 0);
+    }
+
+    outlet
+    {
+        type zeroGradient;
+    }
+
+    inlet
+    {
+        type fixedValue;
+        value uniform (6 0 0);
+    }
+
+    frontAndBack
+    {
+        type empty;
+    }   
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

tutorials/surfaceTracking/interTrackFoam/ramp/0/motionU

@@ -0,0 +1,55 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM Extend Project: Open source CFD        |
+|  \\    /   O peration     | Version:  1.6-ext                               |
+|   \\  /    A nd           | Web:      www.extend-project.de                 |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+FoamFile
+{
+    version         2.0;
+    format          ascii;
+    class           tetPointVectorField;
+    location        "0";
+    object          motionU;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+dimensions          [ 0 1 0 0 0 0 0 ];
+
+internalField       uniform (0 0 0);
+
+referenceLevel      (0 0 0);
+
+boundaryField
+{
+    walls
+    {
+        type fixedValue;
+        value uniform (0 0 0);
+    }
+
+    freeSurface
+    {
+        type fixedValue;
+        value uniform (0 0 0);
+    }
+
+    outlet
+    {
+        type slip;
+    }
+
+    inlet
+    {
+        type slip;
+    }
+
+    frontAndBack
+    {
+        type empty;
+    }   
+}
+
+// ************************************************************************* //

tutorials/surfaceTracking/interTrackFoam/ramp/0/p

@@ -0,0 +1,53 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM Extend Project: Open source CFD        |
+|  \\    /   O peration     | Version:  1.6-ext                               |
+|   \\  /    A nd           | Web:      www.extend-project.de                 |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+FoamFile
+{
+    version         2.0;
+    format          ascii;
+    class           volScalarField;
+    location        "0";
+    object          p;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+
+dimensions          [1 -1 -2 0 0 0 0];
+
+internalField       uniform 0;
+
+boundaryField
+{
+    walls
+    {
+        type zeroGradient;
+    }
+
+    freeSurface
+    {
+        type fixedValue;
+        value uniform 0.0;
+    }
+
+    outlet
+    {
+        type zeroGradient;
+    }
+
+    inlet
+    {
+        type zeroGradient;
+    }
+
+    frontAndBack
+    {
+        type empty;
+    }   
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //

tutorials/surfaceTracking/interTrackFoam/ramp/Allclean

@@ -0,0 +1,14 @@
+#!/bin/sh
+
+# Source tutorial clean functions
+. $WM_PROJECT_DIR/bin/tools/CleanFunctions
+
+cleanFaMesh ()
+{
+    rm -rf ./constant/faMesh/faceLabels* \
+           ./constant/faMesh/boundary* \
+           > /dev/null 2>&1
+}
+
+cleanCase
+cleanFaMesh

tutorials/surfaceTracking/interTrackFoam/ramp/Allrun

@@ -0,0 +1,10 @@
+#!/bin/sh
+# Source tutorial run functions
+. $WM_PROJECT_DIR/bin/tools/RunFunctions
+
+# Get application name from directory
+application="interTrackFoam"
+
+runApplication blockMesh
+runApplication makeFaMesh
+runApplication $application

tutorials/surfaceTracking/interTrackFoam/ramp/constant/dynamicMeshDict

@@ -0,0 +1,38 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM Extend Project: Open source CFD        |
+|  \\    /   O peration     | Version:  1.6-ext                               |
+|   \\  /    A nd           | Web:      www.extend-project.de                 |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+FoamFile
+{
+    version         2.0;
+    format          ascii;
+    class           dictionary;
+    object          dynamicMeshDict;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+dynamicFvMesh dynamicMotionSolverFvMesh;
+
+twoDMotion yes;
+
+solver laplaceFaceDecomposition;
+
+diffusivity uniform 1.0;
+
+distancePatches 1 (freeSurface);
+
+frozenDiffusion yes;
+
+
+pseudoSolid
+{
+    poissonsRatio           0.3;
+    nCorrectors             3;
+    convergenceTolerance    1e-9;
+};
+
+// ************************************************************************* //

tutorials/surfaceTracking/interTrackFoam/ramp/constant/faMesh/faMeshDefinition

@@ -0,0 +1,44 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
+|  \\    /   O peration     | Version:  1.5                                   |
+|   \\  /    A nd           | Web:      http://www.OpenFOAM.org               |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+FoamFile
+{
+    version     2.0;
+    format      ascii;
+    class       dictionary;
+    object      faMeshDefinition;
+}
+// ************************************************************************** //
+
+polyMeshPatches  1( freeSurface );
+
+boundary
+{
+    inlet
+    {
+        type                patch;
+        ownerPolyPatch      freeSurface;
+        neighbourPolyPatch  inlet;
+    }
+
+    outlet
+    {
+        type                patch;
+        ownerPolyPatch      freeSurface;
+        neighbourPolyPatch  outlet;
+    }
+
+    frontAndBack
+    {
+        type                empty;
+        ownerPolyPatch      freeSurface;
+        neighbourPolyPatch  frontAndBack;
+    }
+}
+
+
+// ************************************************************************** //

tutorials/surfaceTracking/interTrackFoam/ramp/constant/freeSurfaceProperties

@@ -0,0 +1,61 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM Extend Project: Open source CFD        |
+|  \\    /   O peration     | Version:  1.6-ext                               |
+|   \\  /    A nd           | Web:      www.extend-project.de                 |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+FoamFile
+{
+    version         2.0;
+    format          ascii;
+    class           dictionary;
+    object          freeSurfaceProperties;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+twoFluids no;
+
+normalMotionDir no;
+
+motionDir (0 1 0);
+
+cleanInterface yes;
+
+muFluidA muFluidA [ 1 -1 -1 0 0 0 0 ] 0;
+
+muFluidB muFluidB [ 1 -1 -1 0 0 0 0 ] 0;
+
+rhoFluidA rhoFluidA [ 1 -3  0 0 0 0 0 ] 1.0;
+
+rhoFluidB rhoFluidB   [ 1 -3  0 0 0 0 0 ] 1.0;
+
+surfaceTension surfaceTension [ 1 -2 0 0 0 0 0 ] 0.0;
+
+g g [ 0 1 -2 0 0 0 0 ] (0 -9.81 0);
+
+fixedFreeSurfacePatches 1( inlet );
+
+pointNormalsCorrectionPatches 2(inlet outlet);
+
+nFreeSurfaceCorrectors 1;
+
+surfactantProperties
+{
+    bulkConc            bulkConc            [ 0 -3  0 0  1 0 0 ] 1.0e-2;
+
+    saturatedConc       saturatedSurfConc   [ 0 -2  0 0  1 0 0 ] 5.0e-6;
+
+    adsorptionCoeff     adsorptionCoeff     [ 0  3 -1 0 -1 0 0 ] 40.0;
+
+    desorptionCoeff     desorptionCoeff     [ 0 -3  0 0  1 0 0 ] 8.93e-2;
+
+    bulkDiffusion       bulkDiffusion       [ 0  2 -1 0  0 0 0 ] 1.0e-9;
+
+    diffusion           diffusion           [ 0  2 -1 0  0 0 0 ] 1.0e-9;
+
+    temperature         temperature         [ 0  0  0 1  0 0 0 ] 293.0;
+}
+
+// ************************************************************************* //

tutorials/surfaceTracking/interTrackFoam/ramp/constant/polyMesh/blockMeshDict

@@ -0,0 +1,93 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
+|  \\    /   O peration     | Version:  1.5                                   |
+|   \\  /    A nd           | Web:      http://www.OpenFOAM.org               |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+FoamFile
+{
+    version     2.0;
+    format      ascii;
+    class       dictionary;
+    object      blockMeshDict;
+}
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+convertToMeters 1;
+
+vertices        
+(
+    (-4 0 0)
+    ( 0 0 0)
+    ( 0 1 0)
+    (-4 1 0)
+
+    (-4 0 0.1)
+    ( 0 0 0.1)
+    ( 0 1 0.1)
+    (-4 1 0.1)
+
+    (1 0.2 0)
+    (1 1 0)
+
+    (1 0.2 0.1)
+    (1 1 0.1)
+
+    (5 0.2 0)
+    (5 1 0)
+
+    (5 0.2 0.1)
+    (5 1 0.1)
+
+);
+
+blocks          
+(
+    hex (0 1 2 3 4 5 6 7) (20 10 1) simpleGrading (0.3 1 1)
+    hex (1 8 9 2 5 10 11 6) (10 10 1) simpleGrading (1 1 1)
+    hex (8 12 13 9 10 14 15 11) (20 10 1) simpleGrading (3.33 1 1)
+);
+
+edges           
+(
+);
+
+patches         
+(
+    wall freeSurface 
+    (
+        (3 7 6 2)
+        (2 6 11 9)
+        (9 11 15 13)
+    )
+    wall inlet 
+    (
+        (0 4 7 3)
+    )
+    wall outlet
+    (
+        (12 13 15 14)
+    )
+    wall walls 
+    (
+        (5 4 0 1)
+        (10 5 1 8)
+        (14 10 8 12)
+    )
+    empty frontAndBack 
+    (
+        (0 3 2 1)
+        (4 5 6 7)
+        (1 2 9 8)
+        (5 10 11 6)
+        (8 9 13 12)
+        (10 14 15 11)
+    )
+);
+
+mergePatchPairs 
+(
+);
+
+// ************************************************************************* //

tutorials/surfaceTracking/interTrackFoam/ramp/constant/polyMesh/boundary

@@ -0,0 +1,52 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM Extend Project: Open source CFD        |
+|  \\    /   O peration     | Version:  1.6-ext                               |
+|   \\  /    A nd           | Web:      www.extend-project.de                 |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+FoamFile
+{
+    version     2.0;
+    format      ascii;
+    class       polyBoundaryMesh;
+    location    "constant/polyMesh";
+    object      boundary;
+}
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+5
+(
+    freeSurface
+    {
+        type            wall;
+        nFaces          50;
+        startFace       940;
+    }
+    inlet
+    {
+        type            wall;
+        nFaces          10;
+        startFace       990;
+    }
+    outlet
+    {
+        type            wall;
+        nFaces          10;
+        startFace       1000;
+    }
+    walls
+    {
+        type            wall;
+        nFaces          50;
+        startFace       1010;
+    }
+    frontAndBack
+    {
+        type            empty;
+        nFaces          1000;
+        startFace       1060;
+    }
+)
+
+// ************************************************************************* //

tutorials/surfaceTracking/interTrackFoam/ramp/system/controlDict

@@ -0,0 +1,48 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM Extend Project: Open source CFD        |
+|  \\    /   O peration     | Version:  1.6-ext                               |
+|   \\  /    A nd           | Web:      www.extend-project.de                 |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+FoamFile
+{
+    version     2.0;
+    format      ascii;
+    class       dictionary;
+    location    "system";
+    object      controlDict;
+}
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+application         interTrackFoam;
+
+startFrom           startTime;
+
+startTime           0;
+
+stopAt              endTime;
+
+endTime             6.0;
+
+deltaT              0.01;
+
+writeControl        runTime;
+
+writeInterval       0.1;
+
+cycleWrite          0;
+
+writeFormat         ascii;
+
+writeCompression    compressed;
+
+timeFormat          general;
+
+timePrecision       6;
+
+runTimeModifiable   yes;
+
+// ************************************************************************* //
+
+

tutorials/surfaceTracking/interTrackFoam/ramp/system/faSchemes

@@ -0,0 +1,52 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM Extend Project: Open source CFD        |
+|  \\    /   O peration     | Version:  1.6-ext                               |
+|   \\  /    A nd           | Web:      www.extend-project.de                 |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+FoamFile
+{
+    version         2.0;
+    format          ascii;
+    class           dictionary;
+    location        "system";
+    object          faSchemes;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+ddtSchemes
+{
+}
+
+gradSchemes
+{
+    default none;
+    grad(Us) Gauss linear;
+}
+
+divSchemes
+{
+    default none;
+    div(Us) Gauss linear;
+}
+
+laplacianSchemes
+{
+}
+
+interpolationSchemes
+{
+}
+
+snGradSchemes
+{
+}
+
+fluxRequired
+{
+}
+
+
+// ************************************************************************* //

tutorials/surfaceTracking/interTrackFoam/ramp/system/faSolution

@@ -0,0 +1,21 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
+|  \\    /   O peration     | Version:  1.0                                   |
+|   \\  /    A nd           | Web:      http://www.openfoam.org               |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+
+FoamFile
+{
+    version         2.0;
+    format          ascii;
+    class           dictionary;
+    location        "system";
+    object          faSolution;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+
+// ************************************************************************* //

tutorials/surfaceTracking/interTrackFoam/ramp/system/fvSchemes

@@ -0,0 +1,60 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM Extend Project: Open source CFD        |
+|  \\    /   O peration     | Version:  1.6-ext                               |
+|   \\  /    A nd           | Web:      www.extend-project.de                 |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+FoamFile
+{
+    version         2.0;
+    format          ascii;
+    class           dictionary;
+    location        "system";
+    object          fvSchemes;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+ddtSchemes
+{
+    ddt(rho,U) Euler;
+}
+
+gradSchemes
+{
+    default Gauss linear;
+    grad(p) Gauss linear;
+}
+
+divSchemes
+{
+    div(phi,U) Gauss GammaVDC 0.5;
+}
+
+laplacianSchemes
+{
+    default none;
+    laplacian(mu,U) Gauss linear corrected;
+    laplacian((1|A(U)),p) Gauss linear corrected;
+    laplacian((1|interpolate(A(U))),p) Gauss linear corrected;
+}
+
+interpolationSchemes
+{
+    default linear;
+    interpolate(HbyA) linear;
+}
+
+snGradSchemes
+{
+    default corrected;
+}
+
+fluxRequired
+{
+    p                   0;
+}
+
+
+// ************************************************************************* //

tutorials/surfaceTracking/interTrackFoam/ramp/system/fvSolution

@@ -0,0 +1,53 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM Extend Project: Open source CFD        |
+|  \\    /   O peration     | Version:  1.6-ext                               |
+|   \\  /    A nd           | Web:      www.extend-project.de                 |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+FoamFile
+{
+    version         2.0;
+    format          ascii;
+    class           dictionary;
+    location        "system";
+    object          fvSolution;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+solvers
+{
+    p
+    {
+        solver          PCG;
+        preconditioner  DIC;
+        tolerance       1e-07;
+        relTol          0;
+    }
+
+    U
+    {
+        solver          PBiCG;
+        preconditioner  DILU;
+        tolerance       1e-06;
+        relTol          0;
+    }
+}
+
+PISO
+{
+    nOuterCorrectors            5;
+    nCorrectors                 2;
+    nNonOrthogonalCorrectors    1;
+    ddtPhiCorr no;
+}
+
+relaxationFactors
+{
+    p               0.7;
+    U               0.7;
+}
+
+
+// ************************************************************************* //

tutorials/surfaceTracking/interTrackFoam/ramp/system/tetFemSolution

@@ -0,0 +1,30 @@
+/*--------------------------------*- C++ -*----------------------------------*\
+| =========                 |                                                 |
+| \\      /  F ield         | OpenFOAM Extend Project: Open source CFD        |
+|  \\    /   O peration     | Version:  1.6-ext                               |
+|   \\  /    A nd           | Web:      www.extend-project.de                 |
+|    \\/     M anipulation  |                                                 |
+\*---------------------------------------------------------------------------*/
+FoamFile
+{
+    version         2.0;
+    format          ascii;
+    class           dictionary;
+    location        "system";
+    object          tetFemSolution;
+}
+
+// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
+
+solvers
+{
+    motionU
+    {
+        solver          PCG;
+        preconditioner  DIC;
+        tolerance       1e-09;
+        relTol          0.001;
+    }
+}
+
+// ************************************************************************* //