Load balancing development, 5

This commit is contained in:
Hrvoje Jasak 2018-04-13 22:13:13 +01:00
parent 8ca9d01c74
commit 6da19d932c
11 changed files with 752 additions and 95 deletions

View file

@ -250,12 +250,10 @@ void Foam::domainDecomposition::decomposeMesh(const bool filterEmptyPatches)
forAll (patches, patchI)
{
// Reset size and start index for all processors
// Reset size for all processors
forAll (procPatchSize_, procI)
{
procPatchSize_[procI][patchI] = 0;
procPatchStartIndex_[procI][patchI] =
procFaceList[procI].size();
}
}
@ -270,6 +268,8 @@ void Foam::domainDecomposition::decomposeMesh(const bool filterEmptyPatches)
// the neighbour side. This has been prepared in patchNbrCellToProc_
// HJ, 11/Apr/2018
// Dump current processor patch faces into new processor patches
// that will be created in decomposition when running in parallel
forAll (patches, patchI)
{
// Check the processor patch for which neighbour data exists
@ -338,7 +338,10 @@ void Foam::domainDecomposition::decomposeMesh(const bool filterEmptyPatches)
// Add the face
interProcBouFound = true;
curInterProcBFacesOwnIter().append(patchStart + patchFaceI);
curInterProcBFacesOwnIter().append
(
patchStart + patchFaceI
);
SLList<label>::iterator
curInterProcBdrsNeiIter =
@ -447,6 +450,13 @@ void Foam::domainDecomposition::decomposeMesh(const bool filterEmptyPatches)
forAll (patches, patchI)
{
// New patch: record start index for all processors
forAll (procPatchSize_, procI)
{
procPatchStartIndex_[procI][patchI] =
procFaceList[procI].size();
}
const label patchStart = patches[patchI].patch().start();
// Do normal patches. Note that processor patches

View file

@ -50,6 +50,7 @@ Foam::domainDecomposition::domainDecomposition
mesh_(mesh),
decompositionDict_(dict),
nProcs_(readInt(decompositionDict_.lookup("numberOfSubdomains"))),
distributed_(false),
cellToProc_(mesh_.nCells()),
patchNbrCellToProc_(mesh_.boundaryMesh().size()),
procPointAddressing_(nProcs_),
@ -65,7 +66,12 @@ Foam::domainDecomposition::domainDecomposition
procProcessorPatchStartIndex_(nProcs_),
globallySharedPoints_(0),
cyclicParallel_(false)
{}
{
if (decompositionDict_.found("distributed"))
{
distributed_ = Switch(decompositionDict_.lookup("distributed"));
}
}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //

View file

@ -65,6 +65,9 @@ class domainDecomposition
//- Number of processors in decomposition
label nProcs_;
//- Is the decomposition data to be distributed for each processor
bool distributed_;
//- Processor label for each cell
labelList cellToProc_;
@ -160,6 +163,12 @@ public:
return nProcs_;
}
//- Is the decomposition data to be distributed for each processor
inline bool distributed() const
{
return distributed_;
}
//- Return cell-processor decomposition labels
const labelList& cellToProc() const
{

View file

@ -0,0 +1,40 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "passiveProcessorFvPatch.H"
#include "addToRunTimeSelectionTable.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(passiveProcessorFvPatch, 0);
addToRunTimeSelectionTable(fvPatch, passiveProcessorFvPatch, polyPatch);
}
// ************************************************************************* //

View file

@ -0,0 +1,94 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::passiveProcessorFvPatch
Description
Passive processor fvPatch. See passiveProcessorPolyPatch
Author
Hrvoje Jasak, Wikki Ltd. All rights reserved.
SourceFiles
passiveProcessorFvPatch.C
\*---------------------------------------------------------------------------*/
#ifndef passiveProcessorFvPatch_H
#define passiveProcessorFvPatch_H
#include "coupledFvPatch.H"
#include "processorLduInterface.H"
#include "passiveProcessorPolyPatch.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class passiveProcessorFvPatch Declaration
\*---------------------------------------------------------------------------*/
class passiveProcessorFvPatch
:
public fvPatch
{
public:
//- Runtime type information
TypeName(passiveProcessorPolyPatch::typeName_());
// Constructors
//- Construct from components
passiveProcessorFvPatch
(
const polyPatch& patch,
const fvBoundaryMesh& bm
)
:
fvPatch(patch, bm)
{}
//- Destructor
virtual ~passiveProcessorFvPatch()
{}
// Member functions
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

View file

@ -0,0 +1,131 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
\*---------------------------------------------------------------------------*/
#include "passiveProcessorPolyPatch.H"
#include "addToRunTimeSelectionTable.H"
#include "dictionary.H"
#include "SubField.H"
#include "matchPoints.H"
#include "OFstream.H"
#include "polyBoundaryMesh.H"
#include "polyMesh.H"
#include "foamTime.H"
#include "transformList.H"
#include "demandDrivenData.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
defineTypeNameAndDebug(passiveProcessorPolyPatch, 0);
addToRunTimeSelectionTable
(
polyPatch,
passiveProcessorPolyPatch,
dictionary
);
}
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Foam::passiveProcessorPolyPatch::passiveProcessorPolyPatch
(
const word& name,
const label size,
const label start,
const label index,
const polyBoundaryMesh& bm,
const int myProcNo,
const int neighbProcNo
)
:
polyPatch(name, size, start, index, bm),
myProcNo_(myProcNo),
neighbProcNo_(neighbProcNo)
{}
Foam::passiveProcessorPolyPatch::passiveProcessorPolyPatch
(
const word& name,
const dictionary& dict,
const label index,
const polyBoundaryMesh& bm
)
:
polyPatch(name, dict, index, bm),
myProcNo_(readLabel(dict.lookup("myProcNo"))),
neighbProcNo_(readLabel(dict.lookup("neighbProcNo")))
{}
Foam::passiveProcessorPolyPatch::passiveProcessorPolyPatch
(
const passiveProcessorPolyPatch& pp,
const polyBoundaryMesh& bm
)
:
polyPatch(pp, bm),
myProcNo_(pp.myProcNo_),
neighbProcNo_(pp.neighbProcNo_)
{}
Foam::passiveProcessorPolyPatch::passiveProcessorPolyPatch
(
const passiveProcessorPolyPatch& pp,
const polyBoundaryMesh& bm,
const label index,
const label newSize,
const label newStart
)
:
polyPatch(pp, bm, index, newSize, newStart),
myProcNo_(pp.myProcNo_),
neighbProcNo_(pp.neighbProcNo_)
{}
// * * * * * * * * * * * * * * * * Destructor * * * * * * * * * * * * * * * //
Foam::passiveProcessorPolyPatch::~passiveProcessorPolyPatch()
{}
// * * * * * * * * * * * * * * * Member Functions * * * * * * * * * * * * * //
void Foam::passiveProcessorPolyPatch::write(Ostream& os) const
{
polyPatch::write(os);
os.writeKeyword("myProcNo") << myProcNo_
<< token::END_STATEMENT << nl;
os.writeKeyword("neighbProcNo") << neighbProcNo_
<< token::END_STATEMENT << nl;
}
// ************************************************************************* //

View file

@ -0,0 +1,177 @@
/*---------------------------------------------------------------------------*\
========= |
\\ / F ield | foam-extend: Open Source CFD
\\ / O peration | Version: 4.0
\\ / A nd | Web: http://www.foam-extend.org
\\/ M anipulation | For copyright notice see file Copyright
-------------------------------------------------------------------------------
License
This file is part of foam-extend.
foam-extend is free software: you can redistribute it and/or modify it
under the terms of the GNU General Public License as published by the
Free Software Foundation, either version 3 of the License, or (at your
option) any later version.
foam-extend is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License
along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
Class
Foam::passiveProcessorPolyPatch
Description
Passive processor polyPatch.
Passive processor polyPatch is created in load balancing when new processor
faces are built on each parallel decomposition. It contains the data
which is needed to rebuild correct processor boundaries after load balancing
Author
Hrvoje Jasak, Wikki Ltd. All rights reserved.
SourceFiles
passiveProcessorPolyPatch.C
\*---------------------------------------------------------------------------*/
#ifndef passiveProcessorPolyPatch_H
#define passiveProcessorPolyPatch_H
#include "polyBoundaryMesh.H"
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
namespace Foam
{
/*---------------------------------------------------------------------------*\
Class passiveProcessorPolyPatch Declaration
\*---------------------------------------------------------------------------*/
class passiveProcessorPolyPatch
:
public polyPatch
{
// Private data
//- My processor number
int myProcNo_;
//- Neighbour processor number
int neighbProcNo_;
public:
//- Runtime type information
TypeName("passiveProcessor");
// Constructors
//- Construct from components
passiveProcessorPolyPatch
(
const word& name,
const label size,
const label start,
const label index,
const polyBoundaryMesh& bm,
const int myProcNo,
const int neighbProcNo
);
//- Construct from dictionary
passiveProcessorPolyPatch
(
const word& name,
const dictionary& dict,
const label index,
const polyBoundaryMesh&
);
//- Construct as copy, resetting the boundary mesh
passiveProcessorPolyPatch
(
const passiveProcessorPolyPatch&,
const polyBoundaryMesh&
);
//- Construct as given the original patch and resetting the
// face list and boundary mesh information
passiveProcessorPolyPatch
(
const passiveProcessorPolyPatch& pp,
const polyBoundaryMesh& bm,
const label index,
const label newSize,
const label newStart
);
//- Construct and return a clone, resetting the boundary mesh
virtual autoPtr<polyPatch> clone(const polyBoundaryMesh& bm) const
{
return autoPtr<polyPatch>(new passiveProcessorPolyPatch(*this, bm));
}
//- Construct and return a clone, resetting the face list
// and boundary mesh
virtual autoPtr<polyPatch> clone
(
const polyBoundaryMesh& bm,
const label index,
const label newSize,
const label newStart
) const
{
return autoPtr<polyPatch>
(
new passiveProcessorPolyPatch
(
refCast<const passiveProcessorPolyPatch>(*this),
bm,
index,
newSize,
newStart
)
);
}
//- Destructor
virtual ~passiveProcessorPolyPatch();
// Member functions
//- Return processor number
int myProcNo() const
{
return myProcNo_;
}
//- Return neigbour processor number
int neighbProcNo() const
{
return neighbProcNo_;
}
//- Write the polyPatch data as a dictionary
virtual void write(Ostream&) const;
};
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
} // End namespace Foam
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
#endif
// ************************************************************************* //

View file

@ -25,6 +25,7 @@ License
#include "processorMeshesReconstructor.H"
#include "processorPolyPatch.H"
#include "passiveProcessorPolyPatch.H"
#include "sharedPoints.H"
// * * * * * * * * * * * * * Private Member Functions * * * * * * * * * * * //
@ -45,7 +46,7 @@ Foam::label Foam::processorMeshesReconstructor::firstValidMesh() const
return 0;
}
bool Foam::processorMeshesReconstructor::readMapping()
{
@ -200,7 +201,7 @@ bool Foam::processorMeshesReconstructor::readMapping()
}
}
Info<< "Addressing from files: " << nl;
Info<< "Addressing from files: " << endl;
forAll (meshes_, procI)
{
if (meshes_.set(procI))
@ -359,6 +360,18 @@ void Foam::processorMeshesReconstructor::reconstructPoints(fvMesh& mesh) const
Foam::autoPtr<Foam::fvMesh>
Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
{
// Note:
// In load balancing, there will exist a double set of processor patches
// One, created by moving cells adjacent to "old" processor boundaries
// (processorPolyPatch) and another, created by splitting up previously
// internal mesh faces into "new" processor patches
// In order to reconstruct the mesh correctly, the two sets of processor
// boundaries are kept separately
// In reconstruction, the order of processor patch faces needs to be
// preserved. This is achieved by
// - first adding original processor patch faces
// - adding passiveProcessor patch faces in the processor order
// Check for read
if (readMapping())
@ -407,34 +420,55 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
}
}
// Prepare patch reconstruction from processor 0
wordList reconPatchNames;
wordList reconPatchTypes;
// Prepare patch reconstruction
HashTable<label, word> patchNameLookup
(
meshes_[firstValidMesh()].boundaryMesh().size()
);
DynamicList<word> patchTypeLookup
(
meshes_[firstValidMesh()].boundaryMesh().size()
);
label nReconPatches = 0;
// Grab names and types of patches, excluding processor patches
// Order must be identical on all processors
forAll (meshes_, procI)
{
const polyBoundaryMesh& proc0Boundary =
meshes_[firstValidMesh()].boundaryMesh();
reconPatchNames.setSize(proc0Boundary.size());
reconPatchTypes.setSize(proc0Boundary.size());
nReconPatches = 0;
forAll (proc0Boundary, patchI)
if (meshes_.set(procI))
{
if (!isA<processorPolyPatch>(proc0Boundary[patchI]))
const polyBoundaryMesh& procPatches = meshes_[procI].boundaryMesh();
forAll (procPatches, patchI)
{
// Add patch name to list of patches
reconPatchNames[nReconPatches] = proc0Boundary[patchI].name();
reconPatchTypes[nReconPatches] = proc0Boundary[patchI].type();
nReconPatches++;
if (!isA<processorPolyPatch>(procPatches[patchI]))
{
const word& patchName = procPatches[patchI].name();
// Regular patch. Try to find it in a list
if (!patchNameLookup.found(patchName))
{
// Patch not found. Add it
patchNameLookup.insert(patchName, nReconPatches);
patchTypeLookup.append(procPatches[patchI].type());
nReconPatches++;
}
}
}
}
}
reconPatchNames.setSize(nReconPatches);
reconPatchTypes.setSize(nReconPatches);
// Fill in patch names and types
wordList reconPatchNames(patchNameLookup.size());
wordList reconPatchTypes(patchNameLookup.size());
wordList patchNameToc = patchNameLookup.toc();
forAll (patchNameToc, pnI)
{
const label pnIndex = patchNameLookup.find(patchNameToc[pnI])();
reconPatchNames[pnIndex] = patchNameToc[pnI];
reconPatchTypes[pnIndex] = patchTypeLookup[pnIndex];
}
// Prepare point, face and patch reconstruction
@ -442,6 +476,7 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
label nReconFaces = 0;
label nReconCells = 0;
labelList reconPatchSizes(reconPatchTypes.size(), 0);
Pout<< "reconPatchNames: " << reconPatchNames << endl;
forAll (meshes_, procI)
{
@ -454,40 +489,44 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
const polyBoundaryMesh& procPatches = meshes_[procI].boundaryMesh();
nReconPatches = 0;
forAll (procPatches, patchI)
{
if (!isA<processorPolyPatch>(procPatches[patchI]))
{
// Find processor patch index in reconstructed boundary
const label pnIndex = patchNameLookup.find
(
procPatches[patchI].name()
)();
// Check patch name and type
if
(
procPatches[patchI].name()
!= reconPatchNames[nReconPatches]
!= reconPatchNames[pnIndex]
|| procPatches[patchI].type()
!= reconPatchTypes[nReconPatches]
!= reconPatchTypes[pnIndex]
)
{
FatalErrorIn
(
"autoPtr<fvMesh> processorMeshesReconstructor::"
"reconstructMesh(const Time& db)"
) << "Patch names, types or ordering does not match "
<< "across processors"
) << "Patch name and type does not match "
<< "across processors for patch "
<< procPatches[patchI].name() << " type: "
<< procPatches[patchI].type()
<< abort(FatalError);
}
// Record number of faces in patch
reconPatchSizes[nReconPatches] +=
procPatches[patchI].size();
nReconPatches++;
reconPatchSizes[pnIndex] += procPatches[patchI].size();
}
}
}
}
Info<< "Estimated max global mesh size (with duplicates): " << nl
Pout<< "Estimated max global mesh size (with duplicates): " << nl
<< " nPoints = " << nReconPoints << nl
<< " nFaces = " << nReconFaces << nl
<< " nCells = " << nReconCells << nl
@ -612,8 +651,9 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
// Dump first valid mesh without checking
{
Pout<< "Dump mesh 0" << endl;
const label fvmId = firstValidMesh();
cellOffset[fvmId] = 0;
const polyMesh& curMesh = meshes_[fvmId];
@ -678,6 +718,9 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
const processorPolyPatch& procPatch =
refCast<const processorPolyPatch>(procPatches[patchI]);
// Record boundary-processor addressing: unmapped patch
bpAddr[patchI] = -1;
for
(
label faceI = procPatch.start();
@ -704,12 +747,19 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
else
{
// Regular patch: dump faces into patch face list
faceList& curRpFaces = reconPatchFaces[patchI];
labelList& curRpfOwner = reconPatchOwner[patchI];
label& nRpf = reconPatchSizes[patchI];
const polyPatch& curPatch = procPatches[patchI];
// Find processor patch index in reconstructed boundary
const label pnIndex = patchNameLookup.find(curPatch.name())();
// Record boundary-processor addressing: mapped patch
bpAddr[patchI] = pnIndex;
faceList& curRpFaces = reconPatchFaces[pnIndex];
labelList& curRpfOwner = reconPatchOwner[pnIndex];
label& nRpf = reconPatchSizes[pnIndex];
for
(
label faceI = curPatch.start();
@ -730,7 +780,6 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
// HJ, 16/Feb/2011
fpAddr[faceI] = nRpf + 1;
nRpf++;
}
}
}
@ -740,15 +789,6 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
{
cpAddr[cellI] = cellI; // + cellOffset[firstValidMesh()];
}
// Sort out boundary addressing: i for live patches, -1 for processor
bpAddr = -1;
// Note: loop over mapped patches
forAll (reconPatchSizes, patchI)
{
bpAddr[patchI] = patchI;
}
}
@ -756,6 +796,7 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
for (label procI = 1; procI < meshes_.size(); procI++)
{
Pout<< "Dump mesh " << procI << endl;
// Grab cell offset from previous offset and mesh size
cellOffset[procI] =
cellOffset[procI - 1] + meshes_[procI - 1].nCells();
@ -784,7 +825,7 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
// Collect point-processor addressing for points on processor patches
// Go through all patches. For neighbour patches, access
// Go through all processor patches. For neighbour patches, access
// owner addressing and dump into ppAddr
forAll (procPatches, patchI)
{
@ -868,7 +909,7 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
}
}
Info<< "Processor " << procI << " merged " << nMergedPoints
Pout<< "Processor " << procI << " merged " << nMergedPoints
<< " points out of local " << curPoints.size()
<< " and total " << nReconPoints << endl;
@ -934,6 +975,9 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
const processorPolyPatch& procPatch =
refCast<const processorPolyPatch>(procPatches[patchI]);
// Record boundary-processor addressing: unmapped patch
bpAddr[patchI] = -1;
// If patch is a master, drop the faces and fill the
// owner side addressing
if (procPatch.master())
@ -1008,12 +1052,19 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
else
{
// Regular patch: dump faces into patch face list
faceList& curRpFaces = reconPatchFaces[patchI];
labelList& curRpfOwner = reconPatchOwner[patchI];
label& nRpf = reconPatchSizes[patchI];
const polyPatch& curPatch = procPatches[patchI];
// Find processor patch index in reconstructed boundary
const label pnIndex = patchNameLookup.find(curPatch.name())();
// Record boundary-processor addressing: mapped patch
bpAddr[patchI] = pnIndex;
faceList& curRpFaces = reconPatchFaces[pnIndex];
labelList& curRpfOwner = reconPatchOwner[pnIndex];
label& nRpf = reconPatchSizes[pnIndex];
for
(
label faceI = curPatch.start();
@ -1043,16 +1094,6 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
{
cpAddr[cellI] = cellI + cellOffset[procI];
}
// Sort out boundary addressing: i for live patches,
// -1 for processor
bpAddr = -1;
// Note: loop over mapped patches
forAll (reconPatchSizes, patchI)
{
bpAddr[patchI] = patchI;
}
}
}
@ -1147,6 +1188,7 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
}
}
// Create global mesh with given region name
autoPtr<fvMesh> globalMeshPtr
(
new fvMesh
@ -1166,31 +1208,97 @@ Foam::processorMeshesReconstructor::reconstructMesh(const Time& db)
);
fvMesh& globalMesh = globalMeshPtr();
// Create patch list using mesh from processor 0
List<polyPatch*> reconPatches(nReconPatches);
// Create patch list by cloning meshes. If all processors hold all live
// patches, it is sufficient to rebuilt the patches only from the first
// valid processor
// Note:
List<polyPatch*> reconPatches(nReconPatches, NULL);
forAll (meshes_, procI)
{
const polyBoundaryMesh& procPatches =
meshes_[firstValidMesh()].boundaryMesh();
reconPatches.setSize(reconPatchSizes.size());
forAll (reconPatchSizes, patchI)
if (meshes_.set(procI))
{
reconPatches[patchI] =
procPatches[patchI].clone
(
globalMesh.boundaryMesh(),
patchI,
reconPatchSizes[patchI],
reconPatchStarts[patchI]
).ptr();
const polyBoundaryMesh& procPatches = meshes_[procI].boundaryMesh();
forAll (procPatches, patchI)
{
// Processor patches have disappeared: skip them
if (!isA<processorPolyPatch>(procPatches[patchI]))
{
// Find processor patch index in reconstructed boundary
const label pnIndex = patchNameLookup.find
(
procPatches[patchI].name()
)();
// Check if the patch has already been set
if (reconPatches[pnIndex] == NULL)
{
// Patch not set: clone it
// Note: watch indices: setting pnIndex from patchI
if (isA<passiveProcessorPolyPatch>(procPatches[patchI]))
{
// For a passive processor patch, create new
// processor patch
const passiveProcessorPolyPatch& ppPatch =
refCast<const passiveProcessorPolyPatch>
(
procPatches[patchI]
);
reconPatches[pnIndex] = new processorPolyPatch
(
ppPatch.name(),
reconPatchSizes[pnIndex],
reconPatchStarts[pnIndex],
pnIndex,
globalMesh.boundaryMesh(),
Pstream::myProcNo(), // Use correct local proc
ppPatch.neighbProcNo()
);
}
else
{
// Regular patch: clone
reconPatches[pnIndex] =
procPatches[patchI].clone
(
globalMesh.boundaryMesh(),
patchI,
reconPatchSizes[pnIndex],
reconPatchStarts[pnIndex]
).ptr();
}
}
}
}
}
}
// Add both poly and fv boundary patches
globalMesh.addFvPatches(reconPatches);
// Check the list and fill in the missing slots
forAll (reconPatches, patchI)
{
if (reconPatches[patchI] == NULL)
{
// Patch not set. Check its type
FatalErrorIn
(
"autoPtr<fvMesh> processorMeshesReconstructor::"
"reconstructMesh(const Time& db)"
) << "Reconstructed patch " << patchI
<< " name " << reconPatchNames[patchI]
<< " type " << reconPatchTypes[patchI]
<< " not set."
<< abort(FatalError);
}
}
// Add boundary patches to polyMesh and fvMesh
// Note: Mark boundary as invalid to disable analysis
// due to the presence of old/new patches
globalMesh.addFvPatches(reconPatches, false);
Pout<< "global boundary: " << globalMesh.boundaryMesh() << endl;
// TODO: point, face and cell zones
Info<< "Reconstructed addressing: " << nl;

View file

@ -25,6 +25,14 @@ Class
Foam::processorMeshesReconstructor
Description
The processorMeshesReconstructor will take a list of meshes with
matching processor boundaries and build a single combined mesh by
matching processor patches to each other.
In order to
Author
Hrvoje Jasak, Wikki Ltd. All rights reserved.
SourceFiles
processorMeshesReconstructor.C

View file

@ -96,10 +96,9 @@ public:
);
// Destructor
virtual ~patchConstrainedDecomp()
{}
//- Destructor
virtual ~patchConstrainedDecomp()
{}
// Member Functions

View file

@ -136,12 +136,12 @@ bool Foam::loadBalanceFvMesh::update()
return false;
}
Info<< "Hello from loadBalanceFvMesh::update()" << endl;
// Check imbalance. Note: add run-time selection for the imbalance
// weights criterion
// Create a parallel decomposition
domainDecomposition meshDecomp
(
@ -152,7 +152,8 @@ bool Foam::loadBalanceFvMesh::update()
// Decompose the mesh based on processor data
meshDecomp.decomposeMesh(false);
// Analyse mesh decomposition to see how many cells are passed to which processor
// Analyse mesh decomposition to see how many cells are passed
// to which processor
labelListList migratedCells(meshDecomp.nProcs());
// Fill local list with number of local cells to be sent to each processor
@ -171,10 +172,13 @@ bool Foam::loadBalanceFvMesh::update()
// Now that each processor has filled in its own part, combine the data
Pstream::gatherList(migratedCells);
Pstream::scatterList(migratedCells);
Pout<< "migratedCells: " << migratedCells << endl;
// Reading through second index now tells how many cells will arrive
// from which processor
// Find out which processor faces will become local internal faces
// by comparing decomposition index from the other side
// Split the mesh and fields over processors and send
for (label procI = 0; procI < meshDecomp.nProcs(); procI++)
@ -193,7 +197,8 @@ bool Foam::loadBalanceFvMesh::update()
(
procI,
time(),
"processorPart" + Foam::name(procI)
"processorPart" + Foam::name(procI),
true // Create passive processor patches
);
fvMesh& procMesh = procMeshPtr();
@ -314,6 +319,76 @@ bool Foam::loadBalanceFvMesh::update()
<< reconMesh.boundary().size()
<< endl;
// Apply changes to the local mesh:
// - refactor the boundary to match new patches. Note: processor
// patch types may be added or removed
// - reset all primitives
Pout<< "Resetting mesh for load balancing. Old boundary names: "
<< boundaryMesh().names() << nl
<< "New boundary names: "
<< reconMesh.boundaryMesh().names() << nl
<< endl;
polyBoundaryMesh& bMesh = const_cast<polyBoundaryMesh&>(boundaryMesh());
const polyBoundaryMesh& reconBMesh = reconMesh.boundaryMesh();
// Resize the existing boundary to match in the number of patches
if (bMesh.size() > reconBMesh.size())
{
// Decreasing in size: check patches that are due to disappear
Pout<< "New boundary is smaller: "
<< bMesh.size() << " to " << reconBMesh.size() << endl;
// Check before resizing: only processor patches may be deleted
bool okToDelete = true;
for (label patchI = reconBMesh.size(); patchI < bMesh.size(); patchI++)
{
if (!isA<processorPolyPatch>(bMesh[patchI]))
{
okToDelete = false;
break;
}
}
if (!okToDelete)
{
FatalErrorIn("bool loadBalanceFvMesh::update()")
<< "Boundary resizing error: deleting non-processor patches "
<< bMesh.size() << " to " << reconBMesh.size() << nl
<< "old patch types: " << bMesh.types() << nl
<< "new patch types: " << reconBMesh.types() << nl
<< "This is not allowed."
<< abort(FatalError);
}
// Resize the boundary
bMesh.setSize(reconBMesh.size());
}
else if (bMesh.size() < reconBMesh.size())
{
// Increasing in size: check patches that are due to disappear
Pout<< "New boundary is larger: "
<< bMesh.size() << " to " << reconBMesh.size() << endl;
bMesh.setSize(reconBMesh.size());
}
// Delete processor patches from old boundary
// Check alignment and types of old and new boundary
// forAll (bMesh, patchI)
// {
// if (!bMesh[patchI].set())
// {
// }
// }
// To Do: reset mesh in polyMesh
// To Do: build a reconstructor from addressing data
// Create field reconstructor
// fvFieldReconstructor fieldReconstructor
// (
@ -330,7 +405,7 @@ bool Foam::loadBalanceFvMesh::update()
// Otherwise, they will be deleted. HJ, 5/Mar/2018
autoPtr<fvMesh> curMesh = procMeshes.set(Pstream::myProcNo(), NULL);
curMesh.ptr();
return true;
}