From 54c7d7fb19b30bc74491d319176ad97d00cbe128 Mon Sep 17 00:00:00 2001
From: Hrvoje Jasak
Date: Tue, 24 Aug 2010 16:19:39 +0100
Subject: [PATCH] Merge update
---
doc/Allwmake | 5 +-
doc/Doxygen/Allwmake | 5 +-
doc/Doxygen/Doxyfile | 2 +-
doc/Doxygen/FoamFooter.html | 2 +-
doc/Doxygen/FoamHeader.html | 26 +-
doc/Doxygen/Macros/tensorOperator.sty | 129 +
doc/Guides-a4/ProgrammersGuide.pdf | Bin 1748108 -> 1779873 bytes
doc/Guides-a4/UserGuide.pdf | Bin 4796560 -> 3709737 bytes
doc/Guides-usletter/ProgrammersGuide.pdf | Bin 0 -> 1788007 bytes
doc/Guides-usletter/UserGuide.pdf | Bin 0 -> 3733364 bytes
src/ODE/ODE/ODE.H | 6 +-
src/ODE/ODESolvers/KRR4/KRR4.H | 6 +-
src/ODE/ODESolvers/ODESolver/ODESolver.C | 2 -
src/ODE/ODESolvers/ODESolver/ODESolver.H | 3 +-
src/ODE/ODESolvers/RK/RK.H | 2 +-
src/ODE/ODESolvers/SIBS/SIBS.H | 12 +-
src/ODE/ODESolvers/SIBS/SIMPR.C | 3 +-
src/ODE/ODESolvers/SIBS/polyExtrapolate.C | 2 +-
src/OSspecific/{Unix => POSIX}/Make/files | 9 +-
src/OSspecific/POSIX/Make/options | 0
src/OSspecific/{Unix/Unix.C => POSIX/POSIX.C} | 201 +-
src/OSspecific/{Unix/Unix.H => POSIX/POSIX.H} | 14 +-
.../{Unix => POSIX}/clockTime/clockTime.C | 0
.../{Unix => POSIX}/clockTime/clockTime.H | 0
.../{Unix => POSIX}/cpuTime/cpuTime.C | 0
.../{Unix => POSIX}/cpuTime/cpuTime.H | 0
.../{Unix => POSIX}/dummyPrintStack.C | 0
src/OSspecific/{Unix => POSIX}/fileStat.C | 0
src/OSspecific/{Unix => POSIX}/fileStat.H | 0
.../multiThreader/multiThreader.C | 0
.../multiThreader/multiThreader.H | 0
.../multiThreader/threadHandler.H | 0
.../multiThreader/threadHandlerI.H | 0
src/OSspecific/{Unix => POSIX}/printStack.C | 12 +-
src/OSspecific/POSIX/regExp.C | 216 ++
src/OSspecific/POSIX/regExp.H | 190 ++
.../{Unix => POSIX}/signals/sigFpe.C | 22 +-
.../{Unix => POSIX}/signals/sigFpe.H | 2 +-
.../{Unix => POSIX}/signals/sigInt.C | 2 +-
.../{Unix => POSIX}/signals/sigInt.H | 2 +-
.../{Unix => POSIX}/signals/sigQuit.C | 2 +-
.../{Unix => POSIX}/signals/sigQuit.H | 2 +-
.../{Unix => POSIX}/signals/sigSegv.C | 2 +-
.../{Unix => POSIX}/signals/sigSegv.H | 2 +-
src/OSspecific/{Unix => POSIX}/timer.C | 0
src/OSspecific/{Unix => POSIX}/timer.H | 0
src/OSspecific/Unix/Make/options | 4 -
src/OpenFOAM/Make/files | 106 +-
.../Dictionaries/Dictionary/Dictionary.C | 17 +-
.../Dictionaries/Dictionary/Dictionary.H | 16 +-
.../DictionaryBase/DictionaryBase.C | 127 +-
.../DictionaryBase/DictionaryBase.H | 34 +-
.../containers/HashTables/HashSet/HashSet.C | 199 ++
.../containers/HashTables/HashSet/HashSet.H | 140 +-
.../HashTables/HashTable/HashTable.C | 317 ++-
.../HashTables/HashTable/HashTable.H | 161 +-
.../HashTables/HashTable/HashTableI.H | 227 +-
.../HashTables/HashTable/HashTableIO.C | 92 +-
src/OpenFOAM/containers/HashTables/Map/Map.H | 22 +-
.../containers/HashTables/PtrMap/PtrMap.H | 2 +-
.../StaticHashTable/StaticHashTable.C | 367 ++-
.../StaticHashTable/StaticHashTable.H | 110 +-
.../StaticHashTable/StaticHashTableI.H | 270 ++-
.../StaticHashTable/StaticHashTableIO.C | 86 +-
.../containers/Identifiers/Keyed/Keyed.H | 132 +
.../containers/Identifiers/Keyed/KeyedI.H | 152 ++
.../LinkedLists/accessTypes/ILList/ILList.C | 48 +-
.../LinkedLists/accessTypes/ILList/ILList.H | 19 +-
.../LinkedLists/accessTypes/ILList/ILListIO.C | 51 +-
.../LinkedLists/accessTypes/LList/LList.C | 30 +-
.../LinkedLists/accessTypes/LList/LList.H | 16 +-
.../LinkedLists/accessTypes/LList/LListIO.C | 46 +-
.../accessTypes/LPtrList/LPtrList.C | 32 +-
.../accessTypes/LPtrList/LPtrList.H | 18 +-
.../accessTypes/LPtrList/LPtrListIO.C | 51 +-
.../LinkedLists/accessTypes/UILList/UILList.C | 34 +-
.../LinkedLists/accessTypes/UILList/UILList.H | 10 +-
.../accessTypes/UILList/UILListIO.C | 24 +-
.../linkTypes/DLListBase/DLListBase.C | 31 +-
.../linkTypes/DLListBase/DLListBase.H | 38 +-
.../linkTypes/DLListBase/DLListBaseI.H | 136 +-
.../linkTypes/SLListBase/SLListBase.C | 24 +-
.../linkTypes/SLListBase/SLListBase.H | 37 +-
.../linkTypes/SLListBase/SLListBaseI.H | 126 +-
.../LinkedLists/user/{DLList => }/DLList.H | 0
.../user/{DLPtrList => }/DLPtrList.H | 0
.../user/{FIFOStack => }/FIFOStack.H | 9 -
.../LinkedLists/user/{IDLList => }/IDLList.H | 0
.../LinkedLists/user/{ISLList => }/ISLList.H | 0
.../user/{LIFOStack => }/LIFOStack.H | 9 -
.../LinkedLists/user/{SLList => }/SLList.H | 0
.../user/{SLPtrList => }/SLPtrList.H | 0
.../user/{UIDLList => }/UIDLList.H | 0
.../Lists/BiIndirectList/BiIndirectList.H | 11 +-
.../Lists/BiIndirectList/BiIndirectListI.H | 9 +-
.../Lists/CompactListList/CompactListList.C | 111 +-
.../Lists/CompactListList/CompactListList.H | 37 +-
.../Lists/CompactListList/CompactListListI.H | 167 +-
.../Lists/CompactListList/CompactListListIO.C | 19 +-
.../Lists/DynamicList/DynamicList.C | 21 +-
.../Lists/DynamicList/DynamicList.H | 129 +-
.../Lists/DynamicList/DynamicListI.H | 393 ++-
.../containers/Lists/FixedList/FixedList.C | 26 +-
.../containers/Lists/FixedList/FixedList.H | 118 +-
.../containers/Lists/FixedList/FixedListI.H | 272 ++-
.../containers/Lists/FixedList/FixedListIO.C | 43 +-
.../containers/Lists/Histogram/Histogram.C | 1 +
.../containers/Lists/Histogram/Histogram.H | 7 +-
.../Lists/IndirectList/IndirectList.H | 6 +-
.../Lists/IndirectList/IndirectListI.H | 11 +-
src/OpenFOAM/containers/Lists/List/List.C | 364 ++-
src/OpenFOAM/containers/Lists/List/List.H | 88 +-
src/OpenFOAM/containers/Lists/List/ListI.H | 76 +
src/OpenFOAM/containers/Lists/List/ListIO.C | 49 +-
.../containers/Lists/List/ListLoopM.H | 16 +-
.../containers/Lists/List/undefListLoopM.H | 46 -
.../containers/Lists/ListOps/ListOps.C | 16 +-
.../containers/Lists/ListOps/ListOps.H | 144 +-
.../Lists/ListOps/ListOpsTemplates.C | 289 ++-
.../containers/Lists/PackedList/PackedList.C | 285 ++-
.../containers/Lists/PackedList/PackedList.H | 481 +++-
.../containers/Lists/PackedList/PackedListI.H | 950 +++++++-
.../Lists/PackedList/PackedListIO.C | 152 --
.../Lists/PackedList/PackedListName.C | 2 -
.../containers/Lists/PtrList/PtrList.C | 12 +-
.../containers/Lists/PtrList/PtrList.H | 15 +
.../containers/Lists/PtrList/PtrListI.H | 117 +-
.../containers/Lists/PtrList/PtrListIO.C | 52 +-
.../containers/Lists/PtrList/PtrListLoopM.H | 56 -
.../Lists/SortableList/ParSortableList.C | 6 +-
.../Lists/SortableList/ParSortableList.H | 5 +-
.../Lists/SortableList/SortableList.C | 150 +-
.../Lists/SortableList/SortableList.H | 80 +-
.../containers/Lists/SubList/SubList.H | 60 +-
.../containers/Lists/SubList/SubListI.H | 64 +-
.../Lists/UIndirectList/UIndirectList.H | 2 +-
.../Lists/UIndirectList/UIndirectListI.H | 2 +-
.../Lists/UIndirectList/UIndirectListIO.C | 2 +-
src/OpenFOAM/containers/Lists/UList/UList.C | 40 +-
src/OpenFOAM/containers/Lists/UList/UList.H | 126 +-
src/OpenFOAM/containers/Lists/UList/UListI.H | 82 +-
src/OpenFOAM/containers/Lists/UList/UListIO.C | 22 +-
.../containers/Lists/UPtrList/UPtrList.C | 41 +-
.../containers/Lists/UPtrList/UPtrList.H | 14 +
.../containers/Lists/UPtrList/UPtrListI.H | 106 +-
.../containers/Lists/UPtrList/UPtrListIO.C | 26 +-
src/OpenFOAM/containers/Matrix/Matrix.C | 407 ----
src/OpenFOAM/containers/Matrix/Matrix.H | 211 --
src/OpenFOAM/containers/Matrix/MatrixI.H | 133 -
src/OpenFOAM/containers/Matrix/MatrixIO.C | 262 --
.../Matrix/tools/DenseMatrixTools.C | 146 --
.../Matrix/tools/EigenSolver/EigenSolver.C | 297 ---
src/OpenFOAM/containers/NamedEnum/NamedEnum.H | 12 +-
src/OpenFOAM/coordinateSystems/Changes.txt | 103 -
.../EulerCoordinateRotation.C | 12 +-
.../EulerCoordinateRotation.H | 0
.../STARCDCoordinateRotation.C | 12 +-
.../STARCDCoordinateRotation.H | 0
.../axisCoordinateRotation.C | 12 +-
.../axisCoordinateRotation.H | 0
.../coordinateRotation.C | 23 +-
.../coordinateRotation.H | 0
.../coordinateSystems/coordinateSystem.C | 161 +-
.../coordinateSystems/coordinateSystem.H | 122 +-
.../coordinateSystems/coordinateSystems.C | 108 +-
.../coordinateSystems/coordinateSystems.H | 88 +-
.../coordinateSystems/cylindricalCS.C | 113 +-
.../coordinateSystems/cylindricalCS.H | 54 +-
.../coordinateSystems/ellipticCylindricalCS.C | 49 +-
.../coordinateSystems/ellipticCylindricalCS.H | 32 +-
.../coordinateSystems/newCoordinateSystem.C | 124 +-
.../parabolicCylindricalCS.C | 16 +-
.../parabolicCylindricalCS.H | 27 +-
src/OpenFOAM/coordinateSystems/sphericalCS.C | 130 +-
src/OpenFOAM/coordinateSystems/sphericalCS.H | 56 +-
src/OpenFOAM/coordinateSystems/toroidalCS.C | 24 +-
src/OpenFOAM/coordinateSystems/toroidalCS.H | 22 +-
src/OpenFOAM/db/Callback/Callback.C | 19 +-
src/OpenFOAM/db/IOobject/IOobject.C | 129 +-
src/OpenFOAM/db/IOobject/IOobject.H | 39 +-
src/OpenFOAM/db/IOobject/IOobjectI.H | 19 +-
src/OpenFOAM/db/IOobject/IOobjectReadHeader.C | 5 +-
.../db/IOobject/IOobjectWriteHeader.C | 8 +-
src/OpenFOAM/db/IOobjectList/IOobjectList.C | 10 +-
src/OpenFOAM/db/IOobjectList/IOobjectList.H | 2 +-
src/OpenFOAM/db/IOobjects/IOField/IOField.C | 109 +-
src/OpenFOAM/db/IOobjects/IOField/IOField.H | 39 +-
src/OpenFOAM/db/IOobjects/IOList/IOList.C | 35 +-
src/OpenFOAM/db/IOobjects/IOList/IOList.H | 3 +
src/OpenFOAM/db/IOobjects/IOMap/IOMap.C | 22 +-
src/OpenFOAM/db/IOobjects/IOMap/IOMap.H | 7 +-
.../db/IOobjects/IOPtrList/IOPtrList.C | 51 +-
.../db/IOobjects/IOPtrList/IOPtrList.H | 6 +
.../db/IOobjects/IOdictionary/IOdictionary.C | 42 +-
.../IOobjects/IOdictionary/IOdictionaryIO.C | 14 +-
src/OpenFOAM/db/IOstreams/Fstreams/IFstream.C | 74 +-
src/OpenFOAM/db/IOstreams/Fstreams/OFstream.C | 45 +-
src/OpenFOAM/db/IOstreams/Fstreams/OFstream.H | 5 +-
src/OpenFOAM/db/IOstreams/IOstreams/IOcheck.C | 85 -
src/OpenFOAM/db/IOstreams/IOstreams/IOprint.C | 119 -
.../db/IOstreams/IOstreams/IOstream.C | 165 +-
.../db/IOstreams/IOstreams/IOstream.H | 14 +-
.../db/IOstreams/IOstreams/InfoProxy.H | 9 +-
src/OpenFOAM/db/IOstreams/IOstreams/Istream.C | 64 +-
src/OpenFOAM/db/IOstreams/IOstreams/Istream.H | 6 +-
src/OpenFOAM/db/IOstreams/IOstreams/Ostream.C | 38 +-
src/OpenFOAM/db/IOstreams/IOstreams/Ostream.H | 37 +-
src/OpenFOAM/db/IOstreams/Pstreams/IPstream.C | 306 +++
src/OpenFOAM/db/IOstreams/Pstreams/IPstream.H | 1 -
src/OpenFOAM/db/IOstreams/Pstreams/OPstream.H | 16 +-
src/OpenFOAM/db/IOstreams/Pstreams/OPwrite.C | 181 --
src/OpenFOAM/db/IOstreams/Pstreams/Pstream.C | 21 +-
src/OpenFOAM/db/IOstreams/Pstreams/Pstream.H | 9 +-
.../IOstreams/Pstreams/PstreamCommsStruct.C | 13 +-
.../Pstreams/{Pprint.C => PstreamsPrint.C} | 15 +-
.../db/IOstreams/Sstreams/ISnextValid.C | 103 -
src/OpenFOAM/db/IOstreams/Sstreams/ISread.C | 283 ---
.../db/IOstreams/Sstreams/ISreadToken.C | 206 --
src/OpenFOAM/db/IOstreams/Sstreams/ISstream.C | 536 +++++
src/OpenFOAM/db/IOstreams/Sstreams/ISstream.H | 6 +-
.../db/IOstreams/Sstreams/ISstreamI.H | 56 +-
src/OpenFOAM/db/IOstreams/Sstreams/OSstream.C | 283 +++
src/OpenFOAM/db/IOstreams/Sstreams/OSstream.H | 23 +-
src/OpenFOAM/db/IOstreams/Sstreams/OSwrite.C | 221 --
.../Sstreams/{Sprint.C => SstreamsPrint.C} | 15 +-
.../db/IOstreams/Sstreams/chkStream.C | 59 +
.../prefixOSwrite.C => prefixOSstream.C} | 83 +-
.../{prefixOSstream => }/prefixOSstream.H | 11 +-
.../db/IOstreams/Sstreams/readHexLabel.C | 15 +-
.../db/IOstreams/Sstreams/readHexLabel.H | 4 +-
src/OpenFOAM/db/IOstreams/Sstreams/state.C | 123 +
.../IOstreams/StringStreams/IStringStream.H | 6 +-
.../IOstreams/StringStreams/OStringStream.H | 10 +-
...ringStreamPrint.C => StringStreamsPrint.C} | 15 +-
.../Tstreams/{ITread.C => ITstream.C} | 47 +-
src/OpenFOAM/db/IOstreams/Tstreams/ITstream.H | 27 +-
.../db/IOstreams/hashes/OSHA1stream.H | 212 ++
src/OpenFOAM/db/IOstreams/token/token.C | 14 +-
src/OpenFOAM/db/IOstreams/token/token.H | 61 +-
src/OpenFOAM/db/IOstreams/token/tokenIO.C | 175 +-
src/OpenFOAM/db/Time/Time.C | 226 +-
src/OpenFOAM/db/Time/Time.H | 109 +-
src/OpenFOAM/db/Time/TimeIO.C | 34 +-
src/OpenFOAM/db/Time/TimeState.H | 12 +
src/OpenFOAM/db/Time/findInstance.C | 98 +-
src/OpenFOAM/db/Time/instant/instant.C | 21 +-
src/OpenFOAM/db/Time/instant/instant.H | 12 +-
src/OpenFOAM/db/Time/subCycleTime.C | 9 +-
src/OpenFOAM/db/Time/subCycleTime.H | 6 +-
src/OpenFOAM/db/Time/timeSelector.C | 113 +-
src/OpenFOAM/db/Time/timeSelector.H | 24 +-
src/OpenFOAM/db/dictionary/dictionary.C | 544 ++++-
src/OpenFOAM/db/dictionary/dictionary.H | 248 +-
.../dictionaryEntry/dictionaryEntry.C | 2 +-
.../dictionaryEntry/dictionaryEntry.H | 14 +-
.../dictionaryEntry/dictionaryEntryIO.C | 18 +-
src/OpenFOAM/db/dictionary/dictionaryIO.C | 44 +-
.../db/dictionary/dictionaryTemplates.C | 44 +-
src/OpenFOAM/db/dictionary/entry/entry.C | 3 +-
src/OpenFOAM/db/dictionary/entry/entry.H | 26 +-
src/OpenFOAM/db/dictionary/entry/entryIO.C | 62 +-
.../functionEntry/functionEntry.C | 16 +-
.../functionEntry/functionEntry.H | 6 +-
.../includeEntry/includeEntry.H | 30 +-
.../includeIfPresentEntry.H | 101 +
.../inputModeEntry/inputModeEntry.C | 59 +-
.../inputModeEntry/inputModeEntry.H | 39 +-
.../functionEntries/removeEntry/removeEntry.C | 19 +-
.../functionEntries/removeEntry/removeEntry.H | 17 +-
.../primitiveEntry/primitiveEntry.C | 20 +-
.../primitiveEntry/primitiveEntry.H | 47 +-
.../primitiveEntry/primitiveEntryIO.C | 25 +-
.../primitiveEntry/primitiveEntryTemplates.C | 2 +-
.../db/dlLibraryTable/dlLibraryTable.H | 6 +-
src/OpenFOAM/db/error/IOerror.C | 22 +-
src/OpenFOAM/db/error/StaticAssert.H | 87 +
src/OpenFOAM/db/error/error.C | 32 +-
src/OpenFOAM/db/error/error.H | 5 -
src/OpenFOAM/db/error/messageStream.C | 2 -
src/OpenFOAM/db/error/messageStream.H | 5 +-
.../functionObjectList/functionObjectList.C | 175 --
.../IOOutputFilter/IOOutputFilter.C | 0
.../IOOutputFilter/IOOutputFilter.H | 2 +-
.../OutputFilterFunctionObject.C | 135 +-
.../OutputFilterFunctionObject.H | 212 ++
.../functionObject/functionObject.C | 37 +-
.../functionObject/functionObject.H | 30 +-
.../functionObjectList/functionObjectList.C | 313 +++
.../functionObjectList/functionObjectList.H | 176 ++
.../outputFilterOutputControl.C | 119 +
.../outputFilterOutputControl.H | 123 +
.../addToMemberFunctionSelectionTable.H | 73 +-
.../memberFunctionSelectionTables.H | 104 +-
.../db/objectRegistry/objectRegistry.C | 105 +-
.../db/objectRegistry/objectRegistry.H | 15 +-
.../objectRegistry/objectRegistryTemplates.C | 21 +-
src/OpenFOAM/db/regIOobject/regIOobject.C | 181 +-
src/OpenFOAM/db/regIOobject/regIOobject.H | 57 +-
src/OpenFOAM/db/regIOobject/regIOobjectI.H | 21 +-
src/OpenFOAM/db/regIOobject/regIOobjectRead.C | 34 +-
.../db/regIOobject/regIOobjectWrite.C | 23 +-
.../addToRunTimeSelectionTable.H | 66 +-
.../runTimeSelection/runTimeSelectionTables.H | 327 ++-
src/OpenFOAM/db/scalarRange/scalarRanges.C | 5 +-
src/OpenFOAM/db/typeInfo/className.H | 176 +-
src/OpenFOAM/db/typeInfo/typeInfo.H | 27 +-
src/OpenFOAM/dimensionSet/dimensionSet.H | 2 +-
src/OpenFOAM/dimensionSet/dimensionSets.C | 1 +
src/OpenFOAM/dimensionSet/dimensionSets.H | 1 +
.../dimensionedType/dimensionedType.C | 14 +
.../dimensionedType/dimensionedType.H | 26 +-
.../DimensionedField/DimensionedField.C | 43 +-
.../DimensionedField/DimensionedField.H | 26 +-
.../DimensionedField/DimensionedFieldI.H | 8 +
.../FieldFields/FieldField/FieldField.H | 4 +-
.../oneFieldField/oneFieldField.H} | 52 +-
.../oneFieldField/oneFieldFieldI.H | 37 +
.../fields/Fields/DynamicField/DynamicField.C | 112 +
.../fields/Fields/DynamicField/DynamicField.H | 215 ++
.../Fields/DynamicField/DynamicFieldI.H | 221 ++
src/OpenFOAM/fields/Fields/Field/Field.C | 60 +-
src/OpenFOAM/fields/Fields/Field/Field.H | 44 +-
src/OpenFOAM/fields/Fields/Field/SubField.H | 28 +-
src/OpenFOAM/fields/Fields/Field/SubFieldI.H | 17 +-
.../fields/Fields/labelField/labelField.H | 2 +-
.../fields/Fields/oneField/oneField.H | 4 -
.../fields/Fields/oneField/oneFieldI.H | 10 -
.../Fields/symmTensorField/symmTensorField.C | 2 +-
.../symmTransformField/symmTransformField.C | 2 +-
.../fields/Fields/tensorField/tensorField.C | 2 +-
.../GeometricField/GeometricField.C | 143 +-
.../GeometricField/GeometricField.H | 60 +-
.../GeometricField/GeometricFieldI.H | 13 +-
.../GeometricField/MapGeometricFields.H | 8 +-
.../SlicedGeometricField.C | 120 +
.../SlicedGeometricField.H | 34 +-
.../geometricOneField/geometricOneField.H | 91 +
.../geometricOneField/geometricOneFieldI.H | 52 +
.../UniformDimensionedField.C | 112 +
.../UniformDimensionedField.H | 118 +
.../uniformDimensionedFields.C | 46 +
.../uniformDimensionedFields.H | 62 +
src/OpenFOAM/fields/cloud/cloud.C | 12 +-
src/OpenFOAM/fields/cloud/cloud.H | 17 +-
src/OpenFOAM/global/JobInfo/JobInfo.C | 67 +-
src/OpenFOAM/global/JobInfo/JobInfo.H | 9 +-
src/OpenFOAM/global/argList/argList.C | 293 +--
src/OpenFOAM/global/argList/argList.H | 103 +-
src/OpenFOAM/global/debug/debug.C | 223 +-
src/OpenFOAM/global/debug/debug.H | 54 +-
src/OpenFOAM/global/global.Cver | 22 +-
src/OpenFOAM/graph/curve/curveTools.C | 182 ++
src/OpenFOAM/graph/curve/curveTools.H | 83 +
src/OpenFOAM/include/CintDefs.H | 6 -
src/OpenFOAM/include/CintUndefs.H | 6 -
src/OpenFOAM/include/OSspecific.H | 55 +-
src/OpenFOAM/include/addLatestTimeOption.H | 1 -
src/OpenFOAM/include/addNoZeroOption.H | 1 -
src/OpenFOAM/include/addRegionOption.H | 6 +-
src/OpenFOAM/include/addTimeOption.H | 1 -
src/OpenFOAM/include/addTimeOptions.H | 4 -
.../include/addTimeOptionsNoConstant.H | 2 -
src/OpenFOAM/include/checkConstantOption.H | 14 +-
src/OpenFOAM/include/checkLatestTimeOption.H | 4 -
src/OpenFOAM/include/checkTimeOption.H | 18 +-
src/OpenFOAM/include/checkTimeOptions.H | 12 +-
.../include/checkTimeOptionsNoConstant.H | 10 +-
src/OpenFOAM/include/createMesh.H | 7 +-
src/OpenFOAM/include/createMeshNoClear.H | 18 +-
src/OpenFOAM/include/createNamedMesh.H | 29 +-
src/OpenFOAM/include/createNamedPolyMesh.H | 29 +-
src/OpenFOAM/include/createPolyMesh.H | 17 +-
src/OpenFOAM/include/createTime.H | 4 +
src/OpenFOAM/include/initTotalVolume.H | 4 +
src/OpenFOAM/include/setRootCase.H | 13 +-
.../interpolationTable/interpolationTable.C | 20 +-
.../interpolationTable/interpolationTable.H | 10 +-
.../CalcPatchToPatchWeights.C | 2 +-
.../matrices/DiagonalMatrix/DiagonalMatrix.C | 100 +
.../matrices/DiagonalMatrix/DiagonalMatrix.H | 103 +
.../matrices/LUscalarMatrix/LUscalarMatrix.C | 8 +-
.../matrices/LUscalarMatrix/LUscalarMatrix.H | 10 +-
.../LUscalarMatrix/LUscalarMatrixTemplates.C | 14 +-
.../RectangularMatrix/RectangularMatrix.H | 92 +
.../RectangularMatrix/RectangularMatrixI.H | 71 +
.../matrices/SquareMatrix/SquareMatrix.H | 97 +
.../matrices/SquareMatrix/SquareMatrixI.H | 90 +
.../processorLduInterfaceTemplates.C | 4 +-
.../matrices/lduMatrix/lduMatrix/lduMatrix.H | 158 +-
.../lduMatrix/lduMatrix/lduMatrixATmul.C | 169 +-
.../lduMatrix/lduMatrix/lduMatrixOperations.C | 47 +-
.../lduMatrix/lduMatrixPreconditioner.C | 150 +-
.../lduMatrix/lduMatrix/lduMatrixSmoother.C | 149 +-
.../lduMatrix/lduMatrix/lduMatrixSolver.C | 88 +-
.../lduMatrix/lduMatrix/lduMatrixTemplates.C | 16 -
.../DICPreconditioner/DICPreconditioner.C | 86 +-
.../DICPreconditioner/DICPreconditioner.H | 2 +-
.../DILUPreconditioner/DILUPreconditioner.C | 89 +-
.../DILUPreconditioner/DILUPreconditioner.H | 2 +-
.../FDICPreconditioner/FDICPreconditioner.C | 80 +-
.../FDICPreconditioner/FDICPreconditioner.H | 6 +-
.../GAMGPreconditioner/GAMGPreconditioner.C | 14 +-
.../GAMGPreconditioner/GAMGPreconditioner.H | 10 +-
.../diagonalPreconditioner.C | 33 +-
.../diagonalPreconditioner.H | 2 +-
.../noPreconditioner/noPreconditioner.C | 23 +-
.../noPreconditioner/noPreconditioner.H | 4 +-
.../lduMatrix/smoothers/DIC/DICSmoother.C | 4 +-
.../lduMatrix/smoothers/DIC/DICSmoother.H | 6 +-
.../DICGaussSeidel/DICGaussSeidelSmoother.C | 9 +-
.../DICGaussSeidel/DICGaussSeidelSmoother.H | 9 +-
.../lduMatrix/smoothers/DILU/DILUSmoother.C | 4 +-
.../lduMatrix/smoothers/DILU/DILUSmoother.H | 7 +-
.../DILUGaussSeidel/DILUGaussSeidelSmoother.C | 5 +-
.../DILUGaussSeidel/DILUGaussSeidelSmoother.H | 8 +-
.../GaussSeidel/GaussSeidelSmoother.C | 21 +-
.../matrices/lduMatrix/solvers/BICCG/BICCG.C | 61 +-
.../matrices/lduMatrix/solvers/BICCG/BICCG.H | 61 +-
.../GAMGAgglomeration/GAMGAgglomeration.C | 8 +-
.../lduMatrix/solvers/GAMG/GAMGSolver.C | 43 +-
.../lduMatrix/solvers/GAMG/GAMGSolver.H | 13 +-
.../matrices/lduMatrix/solvers/ICCG/ICCG.C | 59 +-
.../matrices/lduMatrix/solvers/ICCG/ICCG.H | 58 +-
.../matrices/lduMatrix/solvers/PBiCG/PBiCG.C | 49 +-
.../matrices/lduMatrix/solvers/PBiCG/PBiCG.H | 2 +-
.../matrices/lduMatrix/solvers/PCG/PCG.C | 43 +-
.../matrices/lduMatrix/solvers/PCG/PCG.H | 6 +-
.../solvers/diagonalSolver/diagonalSolver.C | 14 +-
.../solvers/diagonalSolver/diagonalSolver.H | 7 +-
.../solvers/smoothSolver/smoothSolver.C | 20 +-
.../solvers/smoothSolver/smoothSolver.H | 9 +-
.../matrices/scalarMatrices/SVD/SVD.C | 403 ++++
.../matrices/scalarMatrices/SVD/SVD.H | 128 +
.../matrices/scalarMatrices/SVD/SVDI.H | 75 +
.../matrices/scalarMatrices/scalarMatrices.C | 293 +++
.../matrices/scalarMatrices/scalarMatrices.H | 137 ++
.../scalarMatricesTemplates.C} | 49 +-
.../matrices/scalarMatrix/scalarMatrix.C | 193 --
.../matrices/simpleMatrix/simpleMatrix.C | 93 +-
.../matrices/simpleMatrix/simpleMatrix.H | 109 +-
src/OpenFOAM/matrices/solution/solution.C | 137 +-
src/OpenFOAM/matrices/solution/solution.H | 19 +-
src/OpenFOAM/memory/Xfer/Xfer.H | 203 ++
src/OpenFOAM/memory/Xfer/XferI.H | 168 ++
.../{fields/tmp => memory/autoPtr}/autoPtr.H | 22 +-
.../{fields/tmp => memory/autoPtr}/autoPtrI.H | 16 +-
.../{fields => memory}/tmp/refCount.H | 13 +-
src/OpenFOAM/{fields => memory}/tmp/tmp.H | 17 +-
src/OpenFOAM/{fields => memory}/tmp/tmpI.H | 68 +-
src/OpenFOAM/meshes/GeoMesh/GeoMesh.H | 2 +-
src/OpenFOAM/meshes/MeshObject/MeshObject.C | 102 +-
src/OpenFOAM/meshes/MeshObject/MeshObject.H | 39 +-
.../ProcessorTopology/ProcessorTopology.C | 12 +-
.../meshes/ProcessorTopology/commSchedule.C | 9 +-
.../meshes/bandCompression/bandCompression.C | 11 +-
src/OpenFOAM/meshes/boundBox/boundBox.C | 100 +-
src/OpenFOAM/meshes/boundBox/boundBox.H | 123 +-
src/OpenFOAM/meshes/lduMesh/lduMesh.C | 10 +-
src/OpenFOAM/meshes/lduMesh/lduMesh.H | 2 +-
src/OpenFOAM/meshes/meshShapes/cell/cell.H | 7 +-
src/OpenFOAM/meshes/meshShapes/cell/cellI.H | 36 +-
.../meshShapes/cellMatcher/cellMatcher.H | 1 -
.../meshes/meshShapes/cellModel/cellModel.C | 14 +-
.../meshShapes/cellModeller/cellModeller.C | 58 +-
.../meshShapes/cellModeller/cellModeller.H | 11 +-
.../meshShapes/cellModeller/cellModellerIO.C | 91 -
.../cellModeller/globalCellModeller.C | 30 +-
.../meshShapes/cellShape/cellShapeEqual.C | 11 +-
src/OpenFOAM/meshes/meshShapes/edge/EdgeMap.H | 2 +-
src/OpenFOAM/meshes/meshShapes/edge/edge.H | 34 +-
src/OpenFOAM/meshes/meshShapes/face/face.C | 131 +-
src/OpenFOAM/meshes/meshShapes/face/face.H | 60 +-
.../meshShapes/face/faceAreaInContact.C | 10 +-
.../meshShapes/face/faceContactSphere.C | 12 +-
src/OpenFOAM/meshes/meshShapes/face/faceI.H | 63 +-
.../meshes/meshShapes/face/faceIntersection.C | 18 +-
.../meshes/meshShapes/face/faceTemplates.C | 39 +-
.../meshes/meshShapes/tetCell/tetCell.C | 10 +-
.../meshes/meshShapes/tetCell/tetCell.H | 22 +-
.../meshes/meshShapes/tetCell/tetCellI.H | 83 +-
.../meshes/meshShapes/triFace/triFace.H | 36 +-
.../meshes/meshShapes/triFace/triFaceI.H | 21 +-
src/OpenFOAM/meshes/meshTools/matchPoints.C | 16 +-
src/OpenFOAM/meshes/meshTools/mergePoints.C | 14 +-
.../meshes/patchIdentifier/patchIdentifier.C | 11 +-
.../meshes/patchIdentifier/patchIdentifier.H | 10 +-
.../pointBoundaryMesh/pointBoundaryMesh.C | 20 +-
src/OpenFOAM/meshes/pointMesh/pointMesh.C | 7 +-
src/OpenFOAM/meshes/pointMesh/pointMesh.H | 12 +-
.../basic/coupled/coupledPointPatch.C | 13 +-
.../basic/coupled/coupledPointPatch.H | 1 -
.../processor/processorPointPatch.C | 23 +-
.../processor/processorPointPatch.H | 6 +
.../derived/global/globalPointPatch.C | 16 +-
.../derived/global/globalPointPatch.H | 12 +-
.../pointPatches/pointPatch/pointPatch.C | 5 +-
.../polyMesh/globalMeshData/globalIndex.C | 15 -
.../polyMesh/globalMeshData/globalIndex.H | 52 +-
.../polyMesh/globalMeshData/globalIndexI.H | 68 +-
.../polyMesh/globalMeshData/globalMeshData.C | 54 +-
.../polyMesh/globalMeshData/globalMeshData.H | 11 +-
.../polyMesh/globalMeshData/globalPoints.C | 10 +-
.../mapPolyMesh/cellMapper/cellMapper.C | 20 +-
.../mapPolyMesh/faceMapper/faceMapper.C | 16 +-
.../mapPolyMesh/faceMapper/faceMapper.H | 2 +-
.../mapPolyMesh/mapDistribute/mapDistribute.C | 206 +-
.../mapPolyMesh/mapDistribute/mapDistribute.H | 125 +-
.../mapDistribute/mapDistributeTemplates.C | 497 +++-
.../meshes/polyMesh/mapPolyMesh/mapPolyMesh.C | 5 +
.../meshes/polyMesh/mapPolyMesh/mapPolyMesh.H | 2 +-
.../polyBoundaryMesh/polyBoundaryMesh.C | 23 +-
src/OpenFOAM/meshes/polyMesh/polyMesh.C | 276 ++-
src/OpenFOAM/meshes/polyMesh/polyMesh.H | 72 +-
src/OpenFOAM/meshes/polyMesh/polyMeshClear.C | 12 +
.../meshes/polyMesh/polyMeshFromShapeMesh.C | 21 +-
src/OpenFOAM/meshes/polyMesh/polyMeshIO.C | 12 +
.../meshes/polyMesh/polyMeshInitMesh.C | 1 -
src/OpenFOAM/meshes/polyMesh/polyMeshUpdate.C | 8 +-
.../basic/coupled/coupledPolyPatch.C | 18 +-
.../basic/coupled/coupledPolyPatch.H | 2 +-
.../basic/generic/genericPolyPatch.H | 7 +-
.../constraint/cyclic/cyclicPolyPatch.C | 68 +-
.../constraint/cyclic/cyclicPolyPatch.H | 66 +-
.../constraint/processor/processorPolyPatch.C | 4 +-
.../polyPatches/polyPatch/newPolyPatch.C | 18 +-
.../polyPatches/polyPatch/polyPatch.C | 12 +-
.../polyPatches/polyPatch/polyPatch.H | 8 +-
.../meshes/polyMesh/syncTools/syncTools.C | 36 +-
.../meshes/polyMesh/syncTools/syncTools.H | 49 +-
.../polyMesh/syncTools/syncToolsTemplates.C | 494 +++-
.../meshes/polyMesh/zones/ZoneMesh/ZoneMesh.C | 11 +-
.../meshes/polyMesh/zones/ZoneMesh/ZoneMesh.H | 3 +-
.../meshes/polyMesh/zones/cellZone/cellZone.C | 40 +-
.../meshes/polyMesh/zones/cellZone/cellZone.H | 31 +-
.../meshes/polyMesh/zones/faceZone/faceZone.C | 177 +-
.../meshes/polyMesh/zones/faceZone/faceZone.H | 37 +-
.../polyMesh/zones/pointZone/pointZone.C | 41 +-
.../polyMesh/zones/pointZone/pointZone.H | 31 +-
.../preservePatchTypes/preservePatchTypes.C | 24 +-
.../primitiveMesh/PatchTools/PatchTools.C | 37 +
.../primitiveMesh/PatchTools/PatchTools.H | 187 ++
.../PatchTools/PatchToolsCheck.C | 182 ++
.../PatchTools/PatchToolsEdgeOwner.C | 95 +
.../PatchTools/PatchToolsSearch.C | 219 ++
.../PatchTools/PatchToolsSortEdges.C | 128 +
.../PrimitivePatch/PrimitivePatch.C | 122 +-
.../PrimitivePatch/PrimitivePatch.H | 32 +-
.../PrimitivePatch/PrimitivePatchAddressing.C | 16 +-
.../PrimitivePatch/PrimitivePatchBdryPoints.C | 15 +-
.../PrimitivePatch/PrimitivePatchCheck.C | 31 +-
.../PrimitivePatch/PrimitivePatchClear.C | 28 +-
.../PrimitivePatch/PrimitivePatchEdgeLoops.C | 19 +-
.../PrimitivePatchLocalPointOrder.C | 15 +-
.../PrimitivePatch/PrimitivePatchMeshData.C | 73 +-
.../PrimitivePatch/PrimitivePatchMeshEdges.C | 73 +-
.../PrimitivePatchPointAddressing.C | 14 +-
.../PrimitivePatchProjectPoints.C | 21 +-
.../meshes/primitiveMesh/primitiveMesh.C | 67 +-
.../meshes/primitiveMesh/primitiveMesh.H | 188 +-
.../primitiveMesh/primitiveMeshCellCells.C | 62 +-
.../primitiveMeshCellCentresAndVols.C | 17 +-
.../primitiveMesh/primitiveMeshCellEdges.C | 10 +-
.../primitiveMesh/primitiveMeshCellPoints.C | 72 +-
.../meshes/primitiveMesh/primitiveMeshCells.C | 15 +-
.../primitiveMeshCheck/primitiveMeshCheck.C | 114 +-
.../primitiveMeshCheckPointNearness.C | 31 +-
.../meshes/primitiveMesh/primitiveMeshClear.C | 16 +-
.../primitiveMesh/primitiveMeshEdgeCells.C | 93 +-
.../primitiveMesh/primitiveMeshEdgeFaces.C | 73 +-
.../meshes/primitiveMesh/primitiveMeshEdges.C | 435 ++--
.../primitiveMeshFaceCentresAndAreas.C | 16 +-
.../primitiveMesh/primitiveMeshFindCell.C | 16 +-
.../meshes/primitiveMesh/primitiveMeshI.H | 102 +
.../primitiveMesh/primitiveMeshPointCells.C | 80 +-
.../primitiveMesh/primitiveMeshPointFaces.C | 15 +-
.../primitiveMesh/primitiveMeshPointPoints.C | 59 +-
.../primitiveMesh/primitivePatch/patchZones.C | 31 +-
.../primitiveMesh/primitivePatch/walkPatch.C | 59 +-
.../primitiveMesh/primitivePatch/walkPatch.H | 1 -
.../meshes/primitiveShapes/line/line.H | 10 +-
.../primitiveShapes/line/linePointRef.H | 1 +
.../primitiveShapes/objectHit/PointHit.H | 7 +-
.../meshes/primitiveShapes/plane/plane.C | 4 +-
.../primitiveShapes/tetrahedron/tetrahedron.C | 33 +-
.../primitiveShapes/triangle/intersection.H | 2 +-
.../primitiveShapes/triangle/triangle.H | 3 +-
.../primitiveShapes/triangle/triangleI.H | 145 +-
.../primitives/DiagTensor/DiagTensor.H | 10 +-
.../{ => DiagTensor}/diagTensor/diagTensor.C | 6 +
.../{ => DiagTensor}/diagTensor/diagTensor.H | 4 +-
.../Lists/PackedBoolList.H} | 18 +-
src/OpenFOAM/primitives/Lists/scalarIOList.C | 46 +
src/OpenFOAM/primitives/Lists/scalarIOList.H | 51 +
src/OpenFOAM/primitives/Lists/stringList.H | 14 +-
.../primitives/Lists/stringListOpsTemplates.C | 97 +
src/OpenFOAM/primitives/Lists/wordReList.H | 50 +
.../primitives/Lists/wordReListMatcher.H | 101 +
.../primitives/Lists/wordReListMatcherI.H | 79 +
src/OpenFOAM/primitives/Pair/Pair.H | 28 +-
src/OpenFOAM/primitives/Scalar/Scalar.C | 11 +-
src/OpenFOAM/primitives/Scalar/Scalar.H | 54 +-
src/OpenFOAM/primitives/Scalar/doubleFloat.H | 5 +-
.../Scalar/doubleScalar/doubleScalar.C | 2 +
.../Scalar/doubleScalar/doubleScalar.H | 2 +
.../Scalar/floatScalar/floatScalar.C | 2 +
.../Scalar/floatScalar/floatScalar.H | 2 +
.../primitives/Scalar/scalar/scalar.H | 6 +-
.../SphericalTensor/SphericalTensor.H | 2 +
.../SphericalTensor/SphericalTensorI.H | 6 +-
.../labelSphericalTensor.C | 0
.../labelSphericalTensor.H | 4 +-
.../sphericalTensor/sphericalTensor.C | 6 +
.../sphericalTensor/sphericalTensor.H | 2 +-
.../SphericalTensor2D/SphericalTensor2D.H | 2 +
.../sphericalTensor2D/sphericalTensor2D.C | 6 +
.../sphericalTensor2D/sphericalTensor2D.H | 4 +-
.../primitives/SymmTensor/SymmTensor.H | 4 +-
.../primitives/SymmTensor/SymmTensorI.H | 10 +-
.../labelSymmTensor/labelSymmTensor.C | 0
.../labelSymmTensor/labelSymmTensor.H | 4 +-
.../{ => SymmTensor}/symmTensor/symmTensor.C | 17 +-
.../{ => SymmTensor}/symmTensor/symmTensor.H | 4 +-
src/OpenFOAM/primitives/Tensor/Tensor.H | 2 +
src/OpenFOAM/primitives/Tensor/TensorI.H | 9 +-
.../{ => Tensor}/labelTensor/labelTensor.C | 18 +-
.../{ => Tensor}/labelTensor/labelTensor.H | 2 +-
.../primitives/{ => Tensor}/tensor/tensor.C | 34 +-
.../primitives/{ => Tensor}/tensor/tensor.H | 16 +-
src/OpenFOAM/primitives/Tensor2D/Tensor2D.H | 3 +
.../{ => Tensor2D}/tensor2D/tensor2D.C | 14 +
.../{ => Tensor2D}/tensor2D/tensor2D.H | 2 +-
src/OpenFOAM/primitives/Tuple2/Tuple2.H | 29 +-
src/OpenFOAM/primitives/Vector/Vector.H | 2 +
.../complexVector/complexVector.C | 0
.../complexVector/complexVector.H | 0
.../complexVector/complexVectorI.H | 0
.../{ => Vector}/labelVector/labelVector.C | 19 +-
.../{ => Vector}/labelVector/labelVector.H | 4 +-
.../primitives/{ => Vector}/vector/vector.C | 6 +
.../primitives/{ => Vector}/vector/vector.H | 4 +-
src/OpenFOAM/primitives/Vector2D/Vector2D.H | 2 +
.../{ => Vector2D}/vector2D/vector2D.C | 6 +
.../{ => Vector2D}/vector2D/vector2D.H | 2 +-
.../primitives/VectorSpace/VectorSpace.C | 31 +-
.../primitives/VectorSpace/VectorSpace.H | 10 +-
.../primitives/VectorSpace/VectorSpaceI.H | 3 +-
.../primitives/VectorSpace/products.H | 48 -
src/OpenFOAM/primitives/bools/Switch/Switch.C | 155 ++
.../{db => primitives/bools}/Switch/Switch.H | 118 +-
.../boolIO.C => bools/Switch/SwitchIO.C} | 68 +-
.../primitives/{ => bools}/bool/bool.C | 23 +-
.../primitives/{ => bools}/bool/bool.H | 23 +-
src/OpenFOAM/primitives/bools/bool/boolIO.C | 70 +
src/OpenFOAM/primitives/char/charIO.C | 19 +-
src/OpenFOAM/primitives/complex/complex.C | 31 +-
src/OpenFOAM/primitives/complex/complex.H | 36 +-
src/OpenFOAM/primitives/complex/complexI.H | 14 +-
.../primitives/contiguous/contiguous.H | 108 +-
.../functions/Polynomial/Polynomial.C | 187 ++
.../functions/Polynomial/Polynomial.H | 163 ++
.../functions/Polynomial/PolynomialIO.C | 51 +
src/OpenFOAM/primitives/hashes/Hash/Hash.H | 133 +
.../primitives/hashes/Hasher/Hasher.C | 606 +++++
.../primitives/hashes/Hasher/Hasher.H | 71 +
.../primitives/hashes/Hasher/HasherInt.H | 80 +
src/OpenFOAM/primitives/hashes/SHA1/SHA1.C | 455 ++++
src/OpenFOAM/primitives/hashes/SHA1/SHA1.H | 185 ++
.../primitives/hashes/SHA1/SHA1Digest.C | 94 +
.../primitives/hashes/SHA1/SHA1Digest.H | 97 +
src/OpenFOAM/primitives/hashes/SHA1/SHA1I.H | 134 ++
src/OpenFOAM/primitives/{ => ints}/int/int.H | 4 +-
.../primitives/{ => ints}/int/intIO.C | 31 +-
.../primitives/{ => ints}/label/label.C | 16 +-
.../primitives/{ => ints}/label/label.H | 63 +-
.../primitives/{ => ints}/long/long.H | 6 +-
.../primitives/{ => ints}/long/longIO.C | 30 +-
.../primitives/{ => ints}/longLong/longLong.H | 6 +-
.../{ => ints}/longLong/longLongIO.C | 26 +-
src/OpenFOAM/primitives/ints/uLabel/uLabel.C | 55 +
src/OpenFOAM/primitives/ints/uLabel/uLabel.H | 198 ++
.../primitives/{ => ints}/uint/uint.H | 6 +-
.../primitives/{ => ints}/uint/uintIO.C | 29 +-
.../primitives/{ => ints}/ulong/ulong.H | 8 +-
.../primitives/{ => ints}/ulong/ulongIO.C | 38 +-
.../primitives/{empty/empty.H => nil/nil.H} | 34 +-
src/OpenFOAM/primitives/pTraits/pTraits.H | 40 +-
.../primitives/quaternion/quaternion.C | 6 +-
.../primitives/quaternion/quaternion.H | 2 +-
.../primitives/septernion/septernion.C | 6 +-
.../primitives/septernion/septernion.H | 2 +-
.../primitives/strings/fileName/fileName.C | 201 +-
.../primitives/strings/fileName/fileName.H | 47 +-
.../primitives/strings/fileName/fileNameI.H | 15 +-
.../primitives/strings/fileName/fileNameIO.C | 4 +-
.../primitives/strings/string/string.C | 25 +-
.../primitives/strings/string/string.H | 127 +-
.../primitives/strings/string/stringI.H | 119 +-
.../strings/string/stringsGlobals.C | 45 -
src/OpenFOAM/primitives/strings/word/word.C | 1 +
src/OpenFOAM/primitives/strings/word/word.H | 21 +-
src/OpenFOAM/primitives/strings/word/wordI.H | 68 +-
src/OpenFOAM/primitives/strings/word/wordIO.C | 2 +-
.../primitives/strings/wordRe/wordRe.H | 227 ++
.../primitives/strings/wordRe/wordReI.H | 264 ++
.../strings/wordRe/wordReIO.C} | 133 +-
src/Pstream/Allwmake | 11 +-
src/Pstream/gamma/OPwrite.C | 2 +-
src/Pstream/mpi/IPread.C | 10 +-
src/Pstream/mpi/OPwrite.C | 10 +-
src/Pstream/mpi/Pstream.C | 16 +-
src/Pstream/pvm/IPread.C | 114 -
src/Pstream/pvm/Make/files | 5 -
src/Pstream/pvm/Make/options | 4 -
src/Pstream/pvm/Pstream.C | 393 ---
src/autoMesh/Make/options | 2 +-
.../autoHexMeshDriver/autoHexMeshDriver.C | 1 +
.../autoHexMeshDriver/autoLayerDriver.C | 392 +--
.../autoHexMeshDriver/autoLayerDriver.H | 17 +-
.../autoHexMeshDriver/autoLayerDriverShrink.C | 41 +-
.../autoLayerDriverTemplates.C | 2 +-
.../autoHexMeshDriver/autoRefineDriver.C | 119 +-
.../autoHexMeshDriver/autoSnapDriver.C | 29 +-
.../autoHexMeshDriver/autoSnapDriver.H | 2 +-
.../layerParameters/layerParameters.C | 4 +-
.../layerParameters/layerParameters.H | 10 +-
.../autoHexMeshDriver/pointData/pointData.C | 2 -
.../autoHexMeshDriver/pointData/pointDataI.H | 18 +-
.../refinementParameters.C | 22 +-
.../refinementParameters.H | 21 +
.../meshRefinement/meshRefinement.C | 80 +-
.../meshRefinement/meshRefinement.H | 25 +-
.../meshRefinement/meshRefinementBaffles.C | 43 +-
.../meshRefinementProblemCells.C | 16 +-
.../meshRefinement/meshRefinementRefine.C | 208 +-
.../refinementSurfaces/refinementSurfaces.C | 252 +-
.../refinementSurfaces/refinementSurfaces.H | 6 +-
.../trackedParticle/ExactParticle.C | 2 +-
.../trackedParticle/ExactParticle.H | 2 +-
src/conversion/Allwmake | 3 +
src/conversion/ensight/part/ensightPart.C | 12 +-
src/conversion/ensight/part/ensightParts.C | 6 +-
src/conversion/meshReader/calcPointCells.C | 20 +-
src/conversion/meshReader/meshReader.C | 15 +-
src/conversion/meshReader/meshReader.H | 7 -
src/conversion/meshReader/meshReaderAux.C | 6 +-
.../meshReader/starcd/STARCDMeshReader.C | 31 +-
src/conversion/meshTables/boundaryRegion.C | 94 +-
src/conversion/meshTables/boundaryRegion.H | 4 +
src/conversion/meshTables/cellTable.C | 256 +-
src/conversion/meshTables/cellTable.H | 8 +-
src/conversion/meshTables/remappingDict | 39 +
.../meshWriter/starcd/STARCDMeshWriter.C | 9 +-
src/conversion/polyDualMesh/polyDualMesh.C | 65 +-
src/decompositionAgglomeration/Allwmake | 13 -
.../decompositionMethods/Make/options | 6 -
.../parMetisDecomp/Make/files | 3 -
src/decompositionMethods/Allwmake | 18 +
src/decompositionMethods/AllwmakeLnInclude | 8 +
.../decompositionMethods/Make/files | 1 -
.../decompositionMethods/Make/options | 8 +
.../decompositionMethod/decompositionMethod.C | 50 +-
.../decompositionMethod/decompositionMethod.H | 31 +-
.../geomDecomp/geomDecomp.C | 2 -
.../geomDecomp/geomDecomp.H | 2 +-
.../hierarchGeomDecomp/hierarchGeomDecomp.C | 373 ++-
.../hierarchGeomDecomp/hierarchGeomDecomp.H | 58 +
.../manualDecomp/manualDecomp.C | 20 +-
.../manualDecomp/manualDecomp.H | 11 +-
.../simpleGeomDecomp/simpleGeomDecomp.C | 150 +-
.../simpleGeomDecomp/simpleGeomDecomp.H | 27 +-
.../metisDecomp/Make/files | 3 +
.../metisDecomp/Make/options | 10 +
.../metisDecomp/metisDecomp.C | 299 +--
.../metisDecomp/metisDecomp.H | 26 +-
.../parMetisDecomp/Make/files | 3 +
.../parMetisDecomp/Make/options | 4 +-
.../parMetisDecomp/parMetisDecomp.C | 673 +++---
.../parMetisDecomp/parMetisDecomp.H | 27 +-
.../parMetisDecomp/parMetisDecompTemplates.C | 0
.../scotchDecomp/Make/files | 3 +
.../scotchDecomp/Make/options | 7 +
.../scotchDecomp/scotchDecomp.C | 699 ++++++
.../scotchDecomp/scotchDecomp.H | 173 ++
src/dynamicFvMesh/Make/files | 1 -
src/dynamicFvMesh/Make/options | 6 +-
.../dynamicFvMesh/dynamicFvMesh.C | 1 +
.../dynamicFvMesh/dynamicFvMesh.H | 6 +-
.../dynamicInkJetFvMesh/dynamicInkJetFvMesh.C | 6 +-
.../dynamicMotionSolverFvMesh.H | 2 +-
.../dynamicRefineFvMesh/dynamicMeshDict | 27 +-
.../dynamicRefineFvMesh/dynamicRefineFvMesh.C | 47 +-
.../dynamicRefineFvMesh/dynamicRefineFvMesh.H | 20 +-
.../solidBodyMotionFvMesh.C | 5 +-
src/dynamicFvMesh/staticFvMesh/staticFvMesh.H | 3 +-
src/edgeMesh/edgeMesh.C | 23 +-
src/edgeMesh/edgeMeshI.H | 14 +-
src/edgeMesh/edgeMeshIO.C | 16 +-
src/engine/Make/files | 1 -
.../scriptMoveFiles | 10 -
src/engine/engineTime/engineTime.C | 11 +-
.../addOutputCellsAccordionEngineMesh.H | 31 +-
...PistonFacesPointZonesAccordionEngineMesh.H | 5 +-
.../accordionEngineMesh/scriptMoveFiles | 33 -
.../addAttachDetachFacesEngineValveSliding.H | 79 +-
.../addEngineValveSlidingMeshModifiers.C | 2 +-
.../addOutputCellsEngineValveSliding.H | 31 +-
...dPistonFacesPointZonesEngineValveSliding.H | 57 +-
.../engineValveSliding/engineValveSliding.C | 62 +-
.../engineValveSliding/engineValveSliding.H | 2 +-
.../engineValveSlidingCalculate.C | 39 -
.../engineValveSliding/engineValveSlidingI.H | 2 +-
.../engineValveSlidingInitialize.C | 2 +-
.../engineValveSlidingMove.C | 2 +-
.../layerAR/addLayerARMeshModifiers.C | 38 +-
.../engineTopoChangerMesh/layerAR/layerAR.C | 52 +-
.../engineTopoChangerMesh/layerAR/layerAR.H | 46 +-
.../addLayerARGambitMeshModifiers.C | 38 +-
.../layerARGambit/layerARGambit.C | 42 +-
.../layerARGambit/layerARGambit.H | 49 +-
.../layerSmooth/addLayerSmoothMeshModifiers.C | 93 +-
.../layerSmooth/addMeshModifiersLayerSmooth.H | 23 +-
.../layerSmooth/layerSmooth.C | 169 +-
.../layerSmooth/layerSmooth.H | 84 +-
.../layerSmooth/layerSmoothCalculate.C | 30 -
.../layerSmooth/layerSmoothI.H | 6 +-
.../layerSmooth/layerSmoothInitialize.C | 80 +-
.../layerSmooth/layerSmoothMove.C | 57 +-
.../noEngineMesh/addNoEngineMeshModifiers.C | 38 +-
.../noEngineMesh/noEngineMesh.C | 38 +-
.../noEngineMesh/noEngineMesh.H | 65 +-
.../pistonDeform/pistonDeform.C | 38 +-
.../pistonDeform/pistonDeform.H | 46 +-
.../pistonLayer/addPistonLayerMeshModifiers.C | 2 +-
.../pistonLayer/pistonLayer.C | 117 +-
.../pistonLayer/pistonLayer.H | 25 +-
.../pistonRefine/pistonRefine.C | 38 +-
.../pistonRefine/pistonRefine.H | 46 +-
.../addPistonSlidingMeshModifiers.C | 2 +-
.../movePistonPointsPistonSliding.H | 61 +-
.../moveTopOfTheValvesPistonSliding.H | 109 +-
.../pistonSliding/mvFiles | 42 -
.../pistonSliding/pistonSliding.C | 2 +-
.../pistonSliding/pistonSliding.H | 2 +-
.../pistonSliding/pistonSlidingCalculate.C | 2 +-
.../pistonSliding/pistonSlidingI.H | 2 +-
.../pistonSliding/pistonSlidingInitialize.C | 2 +-
.../pistonSliding/pistonSlidingMove.C | 2 +-
.../addAttachDetachFacesThoboisSliding.H | 78 +-
.../addMeshModifiersThoboisSliding.H | 98 +-
.../addThoboisSlidingMeshModifiers.C | 2 +-
.../thoboisSliding/mvFiles | 18 -
.../thoboisSliding/thoboisSliding.C | 2 +-
.../thoboisSliding/thoboisSliding.H | 2 +-
.../thoboisSliding/thoboisSlidingCalculate.C | 2 +-
.../thoboisSliding/thoboisSlidingI.H | 2 +-
.../thoboisSliding/thoboisSlidingInitialize.C | 2 +-
.../thoboisSliding/thoboisSlidingMove.C | 2 +-
.../addVerticalValvesMeshModifiers.C | 2 +-
.../verticalValves/verticalValves.C | 2 +-
.../verticalValves/verticalValves.H | 2 +-
.../verticalValves/verticalValvesCalculate.C | 2 +-
.../verticalValves/verticalValvesI.H | 2 +-
.../verticalValves/verticalValvesInitialize.C | 2 +-
.../verticalValves/verticalValvesMove.C | 2 +-
.../engineVerticalValve/engineVerticalValve.C | 19 +-
src/engine/include/addPistonLayerFaces.H | 25 +-
src/finiteVolume/Make/files | 111 +-
.../compressible/compressibleContinuityErrs.H | 12 +-
.../compressible/compressibleCourantNo.H | 2 +-
.../compressible/compressibleCreatePhi.H | 4 +-
.../cfdTools/general/MRF/MRFZone.C | 502 ++--
.../cfdTools/general/MRF/MRFZone.H | 104 +-
.../cfdTools/general/MRF/MRFZones.C | 78 +-
.../cfdTools/general/MRF/MRFZones.H | 52 +-
.../general/SRF/SRFModel/SRFModel/SRFModel.C | 4 +-
.../SRF/SRFModel/SRFModel/newSRFModel.C | 4 +-
.../cfdTools/general/bound/bound.C | 4 +-
.../timeActivatedExplicitSource.C | 141 +-
.../timeActivatedExplicitSource.H | 120 +-
.../general/findRefCell/findRefCell.C | 3 +-
.../general/include/checkPatchFieldTypes.H | 4 +-
.../cfdTools/general/include/fvCFD.H | 1 +
.../include/readEnvironmentalProperties.H | 15 -
.../general/include/readPIMPLEControls.H | 21 +-
.../general/include/readPISOControls.H | 34 +-
.../general/include/readSIMPLEControls.H | 29 +-
.../general/include/readTimeControls.H | 8 +-
.../cfdTools/general/include/setDeltaT.H | 2 +-
.../cfdTools/general/porousMedia/porousZone.C | 48 +-
.../cfdTools/general/porousMedia/porousZone.H | 46 +-
.../general/porousMedia/porousZones.C | 55 +-
.../general/porousMedia/porousZones.H | 16 +-
.../porousMedia/porousZonesTemplates.C | 2 +-
.../basic/coupled/coupledFvPatchField.C | 1 -
.../basic/generic/genericFvPatchField.C | 100 +-
.../basic/sliced/slicedFvPatchField.C | 10 +-
.../basic/sliced/slicedFvPatchField.H | 2 +-
.../basic/transform/transformFvPatchField.C | 2 +-
.../constraint/empty/emptyFvPatchField.C | 7 +-
.../jumpCyclic/jumpCyclicFvPatchField.C | 2 +-
.../processor/processorFvPatchField.C | 3 +-
.../processor/processorFvPatchField.H | 4 +-
.../activeBaffleVelocityFvPatchVectorField.C | 29 +-
.../activeBaffleVelocityFvPatchVectorField.H | 4 +-
.../derived/advective/advectiveFvPatchField.C | 35 +-
.../buoyantPressureFvPatchScalarField.C} | 95 +-
.../buoyantPressureFvPatchScalarField.H} | 46 +-
.../directMappedFixedValueFvPatchField.C | 177 +-
.../directMappedFixedValueFvPatchField.H | 1 -
...MappedVelocityFluxFixedValueFvPatchField.C | 293 +++
...MappedVelocityFluxFixedValueFvPatchField.H | 149 ++
.../derived/fan/fanFvPatchFields.C | 44 +-
.../fixedInternalValueFvPatchField.C | 103 +
.../fixedInternalValueFvPatchField.H | 149 ++
.../fixedInternalValueFvPatchFields.C} | 8 +-
.../fixedInternalValueFvPatchFields.H} | 20 +-
...ureCompressibleDensityFvPatchScalarField.C | 155 ++
...ureCompressibleDensityFvPatchScalarField.H | 162 ++
.../flowRateInletVelocityFvPatchVectorField.C | 29 +-
.../derived/flux/fluxFvPatchField.C | 30 +-
.../fluxCorrectedVelocityFvPatchVectorField.C | 71 +-
.../fluxCorrectedVelocityFvPatchVectorField.H | 5 +-
.../freestreamPressureFvPatchScalarField.C | 4 +-
.../inletOutlet/inletOutletFvPatchField.C | 23 +-
.../inletOutlet/inletOutletFvPatchField.H | 5 +
...OutletTotalTemperatureFvPatchScalarField.C | 68 +-
...tedInletOutletVelocityFvPatchVectorField.C | 47 +-
...tedInletOutletVelocityFvPatchVectorField.H | 33 +-
...eDirectedInletVelocityFvPatchVectorField.C | 35 +-
...eDirectedInletVelocityFvPatchVectorField.H | 44 +-
...ureInletOutletVelocityFvPatchVectorField.C | 13 +-
...ureInletOutletVelocityFvPatchVectorField.H | 7 +-
...reInletUniformVelocityFvPatchVectorField.C | 11 +
...reInletUniformVelocityFvPatchVectorField.H | 9 +-
.../pressureInletVelocityFvPatchVectorField.C | 41 +-
.../pressureInletVelocityFvPatchVectorField.H | 38 +-
...malInletOutletVelocityFvPatchVectorField.C | 201 ++
...malInletOutletVelocityFvPatchVectorField.H | 191 ++
...ureInletOutletVelocityFvPatchVectorField.C | 2 +-
...ureInletOutletVelocityFvPatchVectorField.H | 5 +-
.../rotatingWallVelocityFvPatchVectorField.C | 153 ++
.../rotatingWallVelocityFvPatchVectorField.H | 192 ++
.../syringePressureFvPatchScalarField.C | 6 +-
...gFlowRateInletVelocityFvPatchVectorField.H | 2 +-
.../AverageIOField.C | 38 +-
.../AverageIOField.H | 22 +-
.../timeVaryingMappedFixedValueFvPatchField.C | 36 +-
.../timeVaryingMappedFixedValueFvPatchField.H | 3 +
...eDirectedInletVelocityFvPatchVectorField.C | 209 ++
...eDirectedInletVelocityFvPatchVectorField.H | 201 ++
...timeVaryingUniformFixedValueFvPatchField.H | 4 +-
...imeVaryingUniformInletOutletFvPatchField.C | 139 ++
...imeVaryingUniformInletOutletFvPatchField.H | 182 ++
...meVaryingUniformInletOutletFvPatchFields.C | 45 +
...eVaryingUniformInletOutletFvPatchFields.H} | 20 +-
...ryingUniformInletOutletFvPatchFieldsFwd.H} | 21 +-
...ngUniformTotalPressureFvPatchScalarField.C | 50 +-
...ngUniformTotalPressureFvPatchScalarField.H | 6 +-
.../totalPressureFvPatchScalarField.C | 67 +-
.../totalTemperatureFvPatchScalarField.C | 72 +-
.../totalTemperatureFvPatchScalarField.H | 6 +-
...ranslatingWallVelocityFvPatchVectorField.C | 142 ++
...ranslatingWallVelocityFvPatchVectorField.H | 155 ++
.../turbulentInletFvPatchField.C | 1 +
.../turbulentInletFvPatchField.H | 1 -
...sityKineticEnergyInletFvPatchScalarField.C | 11 +-
...sityKineticEnergyInletFvPatchScalarField.H | 5 +
...ityHydrostaticPressureFvPatchScalarField.C | 166 ++
...ityHydrostaticPressureFvPatchScalarField.H | 204 ++
.../waveTransmissiveFvPatchField.C | 53 +-
.../waveTransmissiveFvPatchField.H | 2 +-
.../fvPatchFields/fvPatchField/fvPatchField.C | 26 +-
.../fvPatchFields/fvPatchField/fvPatchField.H | 26 +-
.../basic/sliced/slicedFvsPatchField.C | 8 +-
.../fvsPatchField/fvsPatchField.C | 2 +-
.../noConvectionScheme/noConvectionScheme.C | 3 +
.../CoEulerDdtScheme/CoEulerDdtScheme.C | 4 +-
.../finiteVolume/fvSchemes/fvSchemes.C | 238 +-
.../finiteVolume/fvSchemes/fvSchemes.H | 15 +-
src/finiteVolume/finiteVolume/fvm/fvmDdt.C | 2 +-
src/finiteVolume/finiteVolume/fvm/fvmDdt.H | 4 +-
.../finiteVolume/fvm/fvmLaplacian.C | 4 +-
.../finiteVolume/fvm/fvmLaplacian.H | 6 +-
.../leastSquaresGrad/leastSquaresGrad.C | 2 +-
.../cellLimitedGrad/cellLimitedGrad.H | 2 +-
.../cellMDLimitedGrad/cellMDLimitedGrad.H | 5 +-
.../faceLimitedGrad/faceLimitedGrad.H | 10 +-
.../faceLimitedGrad/faceLimitedGrads.C | 6 +-
.../faceMDLimitedGrad/faceMDLimitedGrad.H | 4 +-
.../quadraticFitSnGrad/quadraticFitSnGrad.H | 161 ++
.../quadraticFitSnGradData.C | 325 +++
.../quadraticFitSnGradData.H | 131 +
.../quadraticFitSnGrad/quadraticFitSnGrads.C | 44 +
.../fvMatrices/fvMatrix/fvMatrix.C | 73 +-
.../fvMatrices/fvMatrix/fvMatrix.H | 43 +-
.../fvMatrices/fvMatrix/fvMatrixSolve.C | 14 +-
.../fvScalarMatrix/fvScalarMatrix.C | 11 +-
.../fvScalarMatrix/fvScalarMatrix.H | 16 +-
.../fvMatrices/solvers/MULES/MULES.C | 4 +-
.../fvMatrices/solvers/MULES/MULES.H | 2 +-
.../fvMatrices/solvers/MULES/MULESTemplates.C | 20 +-
.../fullStencils/CECCellToCellStencil.C | 198 ++
.../fullStencils/CECCellToCellStencil.H | 95 +
.../fullStencils/CFCCellToCellStencil.C | 159 ++
.../fullStencils/CFCCellToCellStencil.H | 82 +
.../fullStencils/CPCCellToCellStencil.C | 167 ++
.../fullStencils/CPCCellToCellStencil.H | 94 +
.../fullStencils/cellToCellStencil.C | 350 +++
.../fullStencils/cellToCellStencil.H | 152 ++
.../centredCECCellToFaceStencilObject.C | 38 +
.../centredCECCellToFaceStencilObject.H | 95 +
.../centredCFCCellToFaceStencilObject.C | 38 +
.../centredCFCCellToFaceStencilObject.H | 94 +
.../centredCPCCellToFaceStencilObject.C | 38 +
.../centredCPCCellToFaceStencilObject.H | 95 +
.../centredFECCellToFaceStencilObject.C | 38 +
.../centredFECCellToFaceStencilObject.H | 95 +
.../pureUpwindCFCCellToFaceStencilObject.C | 38 +
.../pureUpwindCFCCellToFaceStencilObject.H | 95 +
.../upwindCECCellToFaceStencilObject.C | 38 +
.../upwindCECCellToFaceStencilObject.H | 102 +
.../upwindCFCCellToFaceStencilObject.C | 38 +
.../upwindCFCCellToFaceStencilObject.H | 102 +
.../upwindCPCCellToFaceStencilObject.C | 38 +
.../upwindCPCCellToFaceStencilObject.H | 102 +
.../upwindFECCellToFaceStencilObject.C | 38 +
.../upwindFECCellToFaceStencilObject.H | 102 +
.../cellToFace/extendedCellToFaceStencil.C | 324 +++
.../cellToFace/extendedCellToFaceStencil.H | 160 ++
.../extendedCellToFaceStencilTemplates.C | 164 ++
.../extendedCentredCellToFaceStencil.C | 73 +
.../extendedCentredCellToFaceStencil.H} | 135 +-
.../extendedUpwindCellToFaceStencil.C | 566 +++++
.../extendedUpwindCellToFaceStencil.H | 204 ++
...extendedUpwindCellToFaceStencilTemplates.C | 144 ++
.../fullStencils/CECCellToFaceStencil.C | 50 +
.../fullStencils/CECCellToFaceStencil.H} | 34 +-
.../fullStencils/CFCCellToFaceStencil.C | 50 +
.../fullStencils/CFCCellToFaceStencil.H | 72 +
.../fullStencils/CPCCellToFaceStencil.C | 50 +
.../fullStencils/CPCCellToFaceStencil.H | 73 +
.../fullStencils/FECCellToFaceStencil.C | 449 ++++
.../fullStencils/FECCellToFaceStencil.H | 85 +
.../fullStencils/cellToFaceStencil.C | 512 ++++
.../fullStencils/cellToFaceStencil.H | 163 ++
.../centredCFCFaceToCellStencilObject.C | 38 +
.../centredCFCFaceToCellStencilObject.H | 87 +
.../extendedCentredFaceToCellStencil.C} | 75 +-
.../extendedCentredFaceToCellStencil.H | 146 ++
.../faceToCell/extendedFaceToCellStencil.C | 62 +
.../faceToCell/extendedFaceToCellStencil.H} | 102 +-
.../extendedFaceToCellStencilTemplates.C | 135 ++
.../fullStencils/CFCFaceToCellStencil.C | 231 ++
.../fullStencils/CFCFaceToCellStencil.H | 77 +
.../fullStencils/faceToCellStencil.C | 41 +
.../fullStencils/faceToCellStencil.H | 108 +
src/finiteVolume/fvMesh/fvMesh.C | 115 +-
src/finiteVolume/fvMesh/fvMesh.H | 33 +-
.../edgeCuts/cellDecompCuts.H | 161 --
.../edgeCuts/cellDecompIsoSurfaceCuts.C | 267 ---
.../edgeCuts/faceDecompCuts.H | 200 --
.../edgeCuts/faceDecompIsoSurfaceCuts.C | 342 ---
.../edgeCuts/faceDecompIsoSurfaceCuts.H | 102 -
.../fvMeshCutSurface/meshCut/cellAddressing.C | 132 -
.../fvMeshCutSurface/meshCut/meshCutSurface.C | 1068 ---------
.../fvMeshCutSurface/meshCut/meshCutSurface.H | 209 --
.../meshCut/meshCutSurfaceInterpolate.C | 174 --
.../fvMeshCutSurface/tetEdges/centreEdge.H | 187 --
.../fvMeshCutSurface/tetEdges/diagonalEdge.H | 199 --
.../fvMeshCutSurface/tetEdges/faceEdge.H | 186 --
.../fvMeshCutSurface/tetEdges/pyramidEdge.H | 185 --
src/finiteVolume/fvMesh/fvMeshGeometry.C | 79 +
.../fvMesh/fvMeshMapper/fvMeshMapper.H | 2 +-
.../fvMesh/fvMeshSubset/fvMeshSubset.C | 22 +-
.../fvMesh/fvMeshSubset/fvMeshSubset.H | 1 -
.../directMapped/directMappedFvPatch.C | 7 -
.../directMapped/directMappedWallFvPatch.C | 46 +
.../directMapped/directMappedWallFvPatch.H | 92 +
.../fvMesh/wallDist/nearWallDist.C | 10 +-
.../fvMesh/wallDist/nearWallDistNoSearch.C | 2 +-
.../fvMesh/wallDist/reflectionVectors.C | 2 +-
src/finiteVolume/fvMesh/wallDist/wallDist.C | 4 +-
.../fvMesh/wallDist/wallDistData.C | 8 +-
.../interpolation/interpolation.H | 6 +-
.../interpolation/newInterpolation.C | 6 +-
.../interpolationCell/interpolationCell.C | 1 -
.../interpolationCell/interpolationCell.H | 1 -
.../cellPointWeight/cellPointWeight.C | 25 +-
.../cellPointWeight/cellPointWeight.H | 6 +-
.../interpolationCellPoint.C | 3 +-
.../interpolationCellPoint.H | 12 +-
.../interpolationCellPointFace.C | 3 +-
.../interpolationCellPointFace.H | 8 +-
.../cellPointWeightWallModified.C | 72 +
.../cellPointWeightWallModified.H | 79 +
.../interpolationCellPointWallModified.C | 42 +
.../interpolationCellPointWallModified.H | 102 +
.../interpolationCellPointWallModifiedI.H | 69 +
.../makeInterpolationCellPointWallModified.C} | 6 +-
.../limitedSchemes/QUICK/QUICK.H | 7 +-
.../limitedSchemes/QUICK/QUICKV.H | 5 +-
.../filteredLinear2/filteredLinear2V.H | 12 +-
.../filteredLinear3/filteredLinear3.C | 48 +
.../filteredLinear3.H} | 58 +-
.../filteredLinear3/filteredLinear3V.H | 125 +
.../limitedSchemes/limitWith/limitWith.C | 37 +
.../limitedSchemes/limitWith/limitWith.H | 161 ++
.../limitedSurfaceInterpolationScheme.H | 11 +-
.../linearUpwind/linearUpwind.H | 2 +-
.../linearUpwind/linearUpwindV.C | 136 ++
.../linearUpwind/linearUpwindV.H | 159 ++
.../schemes/CentredFitScheme/CentredFitData.C | 124 +
.../schemes/CentredFitScheme/CentredFitData.H | 117 +
.../CentredFitScheme/CentredFitScheme.H | 179 ++
.../schemes/FitData/FitData.C | 327 +++
.../schemes/FitData/FitData.H | 164 ++
.../PureUpwindFitScheme/PureUpwindFitScheme.H | 186 ++
.../schemes/UpwindFitScheme/UpwindFitData.C | 204 ++
.../schemes/UpwindFitScheme/UpwindFitData.H} | 122 +-
.../schemes/UpwindFitScheme/UpwindFitScheme.H | 190 ++
.../schemes/biLinearFit/biLinearFit.C | 49 +
.../biLinearFit/biLinearFitPolynomial.H | 101 +
.../schemes/clippedLinear/clippedLinear.H | 2 +-
.../schemes/cubic/cubic.H | 2 +-
.../schemes/cubicUpwindFit/cubicUpwindFit.C | 49 +
.../cubicUpwindFit/cubicUpwindFitPolynomial.H | 109 +
.../schemes/fixedBlended/fixedBlended.C | 37 +
.../schemes/fixedBlended/fixedBlended.H | 259 ++
.../schemes/harmonic/harmonic.H | 7 +-
.../linearPureUpwindFit/linearPureUpwindFit.C | 49 +
.../schemes/localMax/localMax.H | 7 +-
.../schemes/localMin/localMin.H | 7 +-
.../outletStabilised/outletStabilised.H | 16 +-
.../schemes/quadraticFit/quadraticFit.C | 49 +
.../quadraticFit/quadraticFitPolynomial.H | 104 +
.../quadraticLinearFit/quadraticLinearFit.C | 49 +
.../quadraticLinearFitPolynomial.H | 104 +
.../quadraticLinearPureUpwindFit.C | 45 +
.../quadraticLinearUpwindFit.C} | 23 +-
.../quadraticLinearUpwindFitPolynomial.H} | 85 +-
.../quadraticUpwindFit/quadraticUpwindFit.C | 49 +
.../quadraticUpwindFitPolynomial.H | 105 +
.../schemes/reverseLinear/reverseLinear.H | 1 +
.../schemes/skewCorrected/skewCorrected.H | 6 +-
.../surfaceInterpolation.C | 52 +-
.../surfaceInterpolationScheme.C | 33 +-
src/fvAgglomerationMethods/Allwmake | 7 +
.../MGridGenGAMGAgglomerate.C | 0
.../MGridGenGAMGAgglomeration.C | 0
.../MGridGenGAMGAgglomeration.H | 0
.../MGridGenGamgAgglomeration/Make/files | 0
.../MGridGenGamgAgglomeration/Make/options | 2 +-
src/meshTools/Make/files | 21 +
src/meshTools/Make/options | 8 +-
src/meshTools/PointEdgeWave/PointEdgeWave.C | 80 +-
src/meshTools/PointEdgeWave/PointEdgeWave.H | 7 +-
.../cellClassification/cellClassification.C | 25 +-
src/meshTools/cellDist/cellDistFuncs.C | 25 +-
src/meshTools/cellDist/cellDistFuncs.H | 15 +-
.../cellDist/cellDistFuncsTemplates.C | 52 +
.../cellDist/patchWave/patchDataWave.C | 9 +-
.../cellDist/patchWave/patchDataWave.H | 6 +-
src/meshTools/cellDist/patchWave/patchWave.C | 4 +-
src/meshTools/cellFeatures/cellFeatures.C | 18 +-
src/meshTools/cellFeatures/cellFeatures.H | 2 +-
.../directMappedWallPointPatch.C | 52 +
.../directMappedWallPointPatch.H | 84 +
.../directMappedPatchBase.C | 763 ++++++
.../directMappedPatchBase.H | 244 ++
.../directMappedPolyPatch.C | 344 +--
.../directMappedPolyPatch.H | 159 +-
.../directMappedWallPolyPatch.C | 213 ++
.../directMappedWallPolyPatch.H | 208 ++
.../edgeFaceCirculator/edgeFaceCirculator.C | 2 +-
.../edgeFaceCirculator/edgeFaceCirculator.H | 2 +
.../edgeFaceCirculator/edgeFaceCirculatorI.H | 27 +-
src/meshTools/indexedOctree/indexedOctree.C | 1341 +++++++++--
src/meshTools/indexedOctree/indexedOctree.H | 88 +-
src/meshTools/indexedOctree/labelBits.H | 5 +-
src/meshTools/indexedOctree/treeDataCell.C | 10 +-
src/meshTools/indexedOctree/treeDataCell.H | 12 +-
src/meshTools/indexedOctree/treeDataEdge.C | 9 +-
src/meshTools/indexedOctree/treeDataEdge.H | 2 -
src/meshTools/indexedOctree/treeDataFace.C | 4 +-
src/meshTools/indexedOctree/treeDataFace.H | 4 +-
src/meshTools/indexedOctree/treeDataPoint.C | 5 +
.../indexedOctree/treeDataTriSurface.C | 29 +-
src/meshTools/meshSearch/meshSearch.C | 450 +++-
src/meshTools/meshSearch/meshSearch.H | 126 +-
src/meshTools/meshTools/meshTools.C | 143 +-
src/meshTools/meshTools/meshTools.H | 378 +--
src/meshTools/octree/PointIndexHit.H | 44 +-
src/meshTools/octree/octree.C | 218 +-
src/meshTools/octree/octree.H | 6 +-
src/meshTools/octree/octreeDataCell.C | 8 +-
src/meshTools/octree/octreeDataCell.H | 13 +-
src/meshTools/octree/octreeDataEdges.C | 2 +-
src/meshTools/octree/octreeDataEdges.H | 8 +-
src/meshTools/octree/octreeDataFace.C | 82 +-
src/meshTools/octree/octreeDataFace.H | 24 +-
src/meshTools/octree/octreeDataPoint.H | 2 +-
.../octree/octreeDataPointTreeLeaf.C | 4 +-
.../octree/octreeDataPointTreeLeaf.H | 2 +-
src/meshTools/octree/octreeLine.C | 60 +-
src/meshTools/octree/pointIndexHit.H | 9 +-
src/meshTools/octree/treeBoundBox.C | 361 +--
src/meshTools/octree/treeBoundBox.H | 156 +-
src/meshTools/octree/treeBoundBoxI.H | 259 +-
src/meshTools/octree/treeElem.H | 4 +-
src/meshTools/octree/treeLeaf.C | 75 +-
src/meshTools/octree/treeLeaf.H | 8 +-
src/meshTools/octree/treeNode.C | 407 ++--
src/meshTools/octree/treeNode.H | 37 +-
src/meshTools/octree/treeNodeI.H | 33 +-
.../polyMeshZipUpCells/polyMeshZipUpCells.C | 17 +-
.../primitiveMeshGeometry.C | 10 +-
.../primitiveMeshGeometry.H | 2 +-
src/meshTools/regionSplit/regionSplit.C | 9 +-
src/meshTools/regionSplit/regionSplit.H | 4 +-
.../distributedTriSurfaceMesh.C | 4 +-
.../distributedTriSurfaceMesh.H | 2 +-
.../distributedTriSurfaceMeshTemplates.C | 2 +-
.../searchableSurface/searchableBox.C | 2 -
.../searchableSurface/searchableCylinder.C | 2 +-
.../searchableSurface/searchableCylinder.H | 2 +-
.../searchableSurface/searchablePlane.C | 2 +-
.../searchableSurface/searchablePlane.H | 2 +-
.../searchableSurface/searchablePlate.C | 2 +-
.../searchableSurface/searchablePlate.H | 2 +-
.../searchableSurfaceCollection.C | 17 +-
.../searchableSurfaceCollection.H | 2 +-
.../searchableSurfaceWithGaps.C | 2 +-
.../searchableSurfaceWithGaps.H | 2 +-
.../searchableSurfacesQueries.C | 11 +-
.../searchableSurface/triSurfaceMesh.C | 10 +-
.../sets/cellSources/boxToCell/boxToCell.C | 2 -
.../sets/cellSources/cellToCell/cellToCell.C | 8 +-
.../cylinderToCell/cylinderToCell.C | 151 ++
.../cylinderToCell/cylinderToCell.H | 131 +
.../sets/cellSources/faceToCell/faceToCell.C | 4 +-
.../cellSources/fieldToCell/fieldToCell.C | 12 +-
.../sets/cellSources/nbrToCell/nbrToCell.C | 38 +-
.../sets/cellSources/nbrToCell/nbrToCell.H | 2 +-
.../cellSources/nearestToCell/nearestToCell.C | 2 -
.../cellSources/pointToCell/pointToCell.C | 2 -
.../rotatedBoxToCell/rotatedBoxToCell.C | 6 +-
.../cellSources/shapeToCell/shapeToCell.C | 2 -
.../cellSources/surfaceToCell/surfaceToCell.C | 8 +-
.../cellSources/surfaceToCell/surfaceToCell.H | 2 +-
.../sets/cellSources/zoneToCell/zoneToCell.C | 34 +-
.../sets/cellSources/zoneToCell/zoneToCell.H | 5 +-
.../setToCellZone/setToCellZone.C | 168 ++
.../setToCellZone/setToCellZone.H} | 79 +-
.../boundaryToFace/boundaryToFace.C | 2 -
.../sets/faceSources/boxToFace/boxToFace.C | 2 -
.../sets/faceSources/cellToFace/cellToFace.C | 89 +-
.../sets/faceSources/cellToFace/cellToFace.H | 1 +
.../sets/faceSources/faceToFace/faceToFace.C | 2 -
.../faceSources/labelToFace/labelToFace.C | 2 -
.../faceSources/normalToFace/normalToFace.C | 2 -
.../faceSources/patchToFace/patchToFace.C | 31 +-
.../faceSources/patchToFace/patchToFace.H | 5 +-
.../faceSources/pointToFace/pointToFace.C | 2 -
.../sets/faceSources/zoneToFace/zoneToFace.C | 36 +-
.../sets/faceSources/zoneToFace/zoneToFace.H | 5 +-
.../faceZoneToFaceZone/faceZoneToFaceZone.C | 169 ++
.../faceZoneToFaceZone/faceZoneToFaceZone.H | 115 +
.../setToFaceZone/setToFaceZone.C | 175 ++
.../setToFaceZone/setToFaceZone.H | 116 +
.../setsToFaceZone/setsToFaceZone.C | 218 ++
.../setsToFaceZone/setsToFaceZone.H | 119 +
.../sets/pointSources/boxToPoint/boxToPoint.C | 2 -
.../pointSources/cellToPoint/cellToPoint.C | 8 +-
.../pointSources/faceToPoint/faceToPoint.C | 4 +-
.../pointSources/labelToPoint/labelToPoint.C | 2 -
.../nearestToPoint/nearestToPoint.C | 154 ++
.../nearestToPoint/nearestToPoint.H | 122 +
.../pointSources/pointToPoint/pointToPoint.C | 2 -
.../surfaceToPoint/surfaceToPoint.C | 8 +-
.../pointSources/zoneToPoint/zoneToPoint.C | 34 +-
.../pointSources/zoneToPoint/zoneToPoint.H | 5 +-
.../setToPointZone/setToPointZone.C | 168 ++
.../setToPointZone/setToPointZone.H | 115 +
.../sets/topoSetSource/topoSetSource.C | 9 +-
.../sets/topoSetSource/topoSetSource.H | 5 +-
src/meshTools/sets/topoSets/cellSet.C | 13 +
src/meshTools/sets/topoSets/cellSet.H | 9 +
src/meshTools/sets/topoSets/cellZoneSet.C | 314 +++
src/meshTools/sets/topoSets/cellZoneSet.H | 170 ++
src/meshTools/sets/topoSets/faceSet.C | 32 +-
src/meshTools/sets/topoSets/faceSet.H | 11 +-
src/meshTools/sets/topoSets/faceZoneSet.C | 413 ++++
src/meshTools/sets/topoSets/faceZoneSet.H | 187 ++
src/meshTools/sets/topoSets/pointSet.C | 13 +
src/meshTools/sets/topoSets/pointSet.H | 11 +-
src/meshTools/sets/topoSets/pointZoneSet.C | 314 +++
src/meshTools/sets/topoSets/pointZoneSet.H | 173 ++
src/meshTools/sets/topoSets/topoSet.C | 49 +-
src/meshTools/sets/topoSets/topoSet.H | 44 +-
.../booleanSurface/booleanSurface.C | 24 +-
.../intersectedSurface/edgeSurface.C | 13 +-
.../intersectedSurface/intersectedSurface.C | 16 +-
.../surfaceIntersection/edgeIntersections.C | 15 +-
.../surfaceIntersection/surfaceIntersection.C | 29 +-
.../surfaceIntersection/surfaceIntersection.H | 4 -
.../surfaceIntersectionFuncs.C | 3 +-
.../surfaceIntersectionTemplates.C | 24 +-
.../octreeData/octreeDataTriSurface.C | 53 +-
.../octreeData/octreeDataTriSurfaceTreeLeaf.C | 6 +-
.../octreeData/octreeDataTriSurfaceTreeLeaf.H | 2 +-
.../orientedSurface/orientedSurface.C | 128 +-
.../orientedSurface/orientedSurface.H | 9 +
.../surfaceFeatures/surfaceFeatures.C | 119 +-
.../surfaceFeatures/surfaceFeatures.H | 11 +-
.../triSurfaceSearch/triSurfaceSearch.C | 26 +-
.../triSurfaceSearch/triSurfaceSearch.H | 1 -
.../triSurfaceTools/triSurfaceTools.C | 13 +-
.../triSurfaceTools/triSurfaceTools.H | 7 +-
.../triSurface/triangleFuncs/triangleFuncs.C | 418 ++--
.../triSurface/triangleFuncs/triangleFuncs.H | 24 -
.../twoDPointCorrector/twoDPointCorrector.C | 47 +-
src/postProcessing/Allwmake | 5 +-
src/postProcessing/fieldAverage/Make/files | 6 -
.../foamCalcFunctions/Make/files | 4 +
.../basic/addSubtract/addSubtract.C | 306 +++
.../basic/addSubtract/addSubtract.H | 219 ++
.../basic/addSubtract/writeAddSubtractField.C | 93 +
.../basic/addSubtract/writeAddSubtractValue.C | 90 +
.../field/components/components.C | 75 +-
.../foamCalcFunctions/field/div/div.C | 66 +-
.../field/interpolate/interpolate.C | 119 +
.../field/interpolate/interpolate.H | 138 ++
.../field/interpolate/writeInterpolateField.C | 62 +
.../foamCalcFunctions/field/mag/mag.C | 72 +-
.../foamCalcFunctions/field/magGrad/magGrad.C | 66 +-
.../foamCalcFunctions/field/magSqr/magSqr.C | 71 +-
.../field/randomise/randomise.C | 150 ++
.../field/randomise/randomise.H | 141 ++
.../field/randomise/writeRandomField.C | 73 +
src/postProcessing/forces/Make/files | 10 -
.../forces/forceCoeffs/forceCoeffs.C | 142 --
.../forces/forcesFiltered/IOforcesFiltered.H | 50 -
src/postProcessing/functionObjects/Allwmake | 12 +
.../functionObjects/IO/Make/files | 4 +
.../IO}/Make/options | 2 +
.../IOwriteRegisteredObject.H | 50 +
.../writeRegisteredObject.C | 119 +
.../writeRegisteredObject.H} | 90 +-
.../writeRegisteredObjectFunctionObject.C | 47 +
.../writeRegisteredObjectFunctionObject.H | 55 +
.../check/ggiCheck}/ggiCheckFunctionObject.C | 0
.../check/ggiCheck}/ggiCheckFunctionObject.H | 0
.../meshCheck}/meshCheckFunctionObject.C | 0
.../meshCheck}/meshCheckFunctionObject.H | 0
.../functionObjects/field/Make/files | 23 +
.../functionObjects/field/Make/options | 9 +
.../field}/fieldAverage/controlDict | 41 +-
.../fieldAverage/IOFieldAverage.H | 0
.../fieldAverage/fieldAverage/fieldAverage.C | 377 +--
.../fieldAverage/fieldAverage/fieldAverage.H | 58 +-
.../fieldAverage/fieldAverageTemplates.C | 87 +-
.../fieldAverageFunctionObject.C | 0
.../fieldAverageFunctionObject.H | 0
.../fieldAverageItem/fieldAverageItem.C | 0
.../fieldAverageItem/fieldAverageItem.H | 0
.../fieldAverageItem/fieldAverageItemIO.C | 6 +-
.../field/fieldMinMax/IOfieldMinMax.H | 50 +
.../field/fieldMinMax/fieldMinMax.C | 222 ++
.../field/fieldMinMax/fieldMinMax.H | 201 ++
.../fieldMinMax/fieldMinMaxFunctionObject.C} | 6 +-
.../fieldMinMax/fieldMinMaxFunctionObject.H} | 15 +-
.../field/fieldMinMax/fieldMinMaxTemplates.C | 104 +
.../fieldValues/cellSource/IOcellSource.H} | 13 +-
.../field/fieldValues/cellSource/cellSource.C | 245 ++
.../field/fieldValues/cellSource/cellSource.H | 244 ++
.../cellSource/cellSourceFunctionObject.C | 47 +
.../cellSource/cellSourceFunctionObject.H | 55 +
.../fieldValues/cellSource/cellSourceI.H | 46 +
.../cellSource/cellSourceTemplates.C | 179 ++
.../field/fieldValues/controlDict | 108 +
.../fieldValues/faceSource/IOfaceSource.H | 51 +
.../field/fieldValues/faceSource/faceSource.C | 364 +++
.../field/fieldValues/faceSource/faceSource.H | 276 +++
.../faceSource/faceSourceFunctionObject.C | 47 +
.../faceSource/faceSourceFunctionObject.H | 55 +
.../fieldValues/faceSource/faceSourceI.H} | 43 +-
.../faceSource/faceSourceTemplates.C | 265 ++
.../field/fieldValues/fieldValue/fieldValue.C | 187 ++
.../field/fieldValues/fieldValue/fieldValue.H | 195 ++
.../fieldValues/fieldValue/fieldValueI.H | 79 +
.../fieldValue/fieldValueTemplates.C} | 51 +-
.../field}/minMaxField/minMaxField.C | 0
.../field}/minMaxField/minMaxField.H | 0
.../field/readFields/readFields.C | 131 +
.../field/readFields/readFields.H | 174 ++
.../readFields/readFieldsFunctionObject.C | 42 +
.../readFields/readFieldsFunctionObject.H | 54 +
.../field/readFields/readFieldsTemplates.C | 101 +
.../IOsurfaceInterpolateFields.H | 49 +
.../surfaceInterpolateFields.C | 121 +
.../surfaceInterpolateFields.H | 167 ++
.../surfaceInterpolateFieldsFunctionObject.C | 42 +
.../surfaceInterpolateFieldsFunctionObject.H | 54 +
.../surfaceInterpolateFieldsTemplates.C | 79 +
.../functionObjects/forces/Make/files | 36 +
.../{ => functionObjects}/forces/Make/options | 10 +-
.../forces}/forceCoeffs/IOforceCoeffs.H | 0
.../forces}/forceCoeffs/forceCoeffs.C | 14 +-
.../forces}/forceCoeffs/forceCoeffs.H | 8 +-
.../forceCoeffs/forceCoeffsFunctionObject.C | 0
.../forceCoeffs/forceCoeffsFunctionObject.H | 2 +-
.../forces/forces/IOforces.H | 0
.../forces/forces/forces.C | 413 ++--
.../forces/forces/forces.H | 55 +-
.../forces/forces/forcesFunctionObject.C | 0
.../forces/forces/forcesFunctionObject.H | 2 +-
...gidBodyDisplacementPointPatchVectorField.C | 221 ++
...gidBodyDisplacementPointPatchVectorField.H | 173 ++
.../sixDoFRigidBodyMotion.C | 499 ++++
.../sixDoFRigidBodyMotion.H | 390 +++
.../fixedAxis/fixedAxis.C | 187 ++
.../fixedAxis/fixedAxis.H | 129 +
.../fixedLine/fixedLine.C | 178 ++
.../fixedLine/fixedLine.H | 130 +
.../fixedOrientation/fixedOrientation.C | 186 ++
.../fixedOrientation/fixedOrientation.H | 124 +
.../fixedPlane/fixedPlane.C | 161 ++
.../fixedPlane/fixedPlane.H | 128 +
.../fixedPoint/fixedPoint.C | 163 ++
.../fixedPoint/fixedPoint.H | 129 +
.../newSixDoFRigidBodyMotionConstraint.C | 65 +
.../sixDoFRigidBodyMotionConstraint.C | 94 +
.../sixDoFRigidBodyMotionConstraint.H | 180 ++
.../sixDoFRigidBodyMotionI.H | 321 +++
.../sixDoFRigidBodyMotionIO.C | 156 ++
.../linearAxialAngularSpring.C | 220 ++
.../linearAxialAngularSpring.H | 132 +
.../linearSpring/linearSpring.C | 149 ++
.../linearSpring/linearSpring.H | 135 ++
.../newSixDoFRigidBodyMotionRestraint.C | 65 +
.../sixDoFRigidBodyMotionRestraint.C | 72 +
.../sixDoFRigidBodyMotionRestraint.H | 157 ++
.../sphericalAngularSpring.C | 170 ++
.../sphericalAngularSpring.H | 129 +
.../tabulatedAxialAngularSpring.C | 255 ++
.../tabulatedAxialAngularSpring.H | 139 ++
.../sixDoFRigidBodyMotionState.C | 95 +
.../sixDoFRigidBodyMotionState.H | 194 ++
.../sixDoFRigidBodyMotionStateI.H | 102 +
.../sixDoFRigidBodyMotionStateIO.C | 98 +
...gidBodyDisplacementPointPatchVectorField.C | 205 ++
...gidBodyDisplacementPointPatchVectorField.H | 174 ++
.../functionObjects/systemCall/IOsystemCall.H | 50 +
.../functionObjects/systemCall/Make/files | 4 +
.../functionObjects/systemCall/Make/options | 9 +
.../systemCall/systemCall.C} | 72 +-
.../functionObjects/systemCall/systemCall.H} | 104 +-
.../systemCall/systemCallFunctionObject.C | 43 +
.../systemCall/systemCallFunctionObject.H} | 18 +-
.../functionObjects/utilities/Make/files | 7 +
.../functionObjects/utilities/Make/options | 13 +
.../utilities/dsmcFields/IOdsmcFields.C | 50 +
.../utilities/dsmcFields/dsmcFields.C | 274 +++
.../utilities/dsmcFields/dsmcFields.H} | 102 +-
.../dsmcFields/dsmcFieldsFunctionObject.C | 43 +
.../dsmcFields/dsmcFieldsFunctionObject.H | 55 +
.../staticPressure/IOstaticPressure.H | 50 +
.../utilities/staticPressure/staticPressure.C | 147 ++
.../utilities/staticPressure/staticPressure.H | 152 ++
.../staticPressureFunctionObject.C} | 8 +-
.../staticPressureFunctionObject.H | 55 +
src/randomProcesses/Kmesh/Kmesh.C | 37 +-
src/randomProcesses/fft/fft.C | 5 +-
src/randomProcesses/fft/kShellIntegration.C | 16 +-
src/sampling/Make/files | 46 +-
src/sampling/Make/options | 2 +
src/sampling/cuttingPlane/cuttingPlane.C | 226 +-
src/sampling/cuttingPlane/cuttingPlane.H | 82 +-
src/sampling/include/buildPatch.H | 13 +-
.../calculateMeshToMeshAddressing.C | 10 +-
.../meshToMesh/calculateMeshToMeshWeights.C | 2 +-
.../meshToMesh/meshToMesh.C | 4 +-
.../meshToMesh/meshToMesh.H | 4 -
.../meshToMesh/meshToMeshInterpolate.C | 9 +-
src/sampling/probes/probes.C | 21 +-
src/sampling/probes/probes.H | 21 +-
src/sampling/probes/probesDict | 25 +-
src/sampling/sampledSet/cloud/cloudSet.C | 2 +-
src/sampling/sampledSet/curve/curveSet.C | 15 +-
src/sampling/sampledSet/face/faceOnlySet.C | 13 +-
.../sampledSet/midPoint/midPointSet.C | 1 -
.../midPointAndFace/midPointAndFaceSet.C | 1 -
.../sampledSet/sampledSets/sampledSets.C | 31 +-
.../sampledSet/sampledSets/sampledSets.H | 14 +-
.../sampledSets/sampledSetsTemplates.C | 22 +-
src/sampling/sampledSet/uniform/uniformSet.C | 13 +-
.../gnuplot/{gnuplot.C => gnuplotSetWriter.C} | 73 +-
.../gnuplot/{gnuplot.H => gnuplotSetWriter.H} | 53 +-
.../gnuplot/gnuplotSetWriterRunTime.C} | 13 +-
.../jplot/{jplot.C => gnuplotSetWriter.C} | 0
.../jplot/{jplot.H => gnuplotSetWriter.H} | 0
.../writers/jplot/jplotSetWriterRunTime.C} | 13 +-
.../writers/raw/{raw.C => rawSetWriter.C} | 45 +-
.../writers/raw/{raw.H => rawSetWriter.H} | 54 +-
.../writers/raw/rawSetWriterRunTime.C} | 13 +-
.../sampledSet/writers/{writer => }/writer.C | 98 +-
.../sampledSet/writers/{writer => }/writer.H | 124 +-
.../sampledSet/writers/writer/writers.C | 57 -
src/sampling/sampledSet/writers/writers.C | 50 +
src/sampling/sampledSet/writers/writers.H | 80 +
.../writers/xmgrace/xmgraceSetWriter.C | 132 +
.../xmgr.H => xmgrace/xmgraceSetWriter.H} | 53 +-
.../writers/xmgrace/xmgraceSetWriterRunTime.C | 38 +
.../distanceSurface/distanceSurface.C | 472 ++++
.../distanceSurface/distanceSurface.H | 254 ++
.../distanceSurfaceTemplates.C | 69 +
.../sampledSurface/isoSurface/isoSurface.C | 2135 +++++++++++++++++
.../sampledSurface/isoSurface/isoSurface.H | 468 ++++
.../isoSurface/isoSurfaceCell.C | 1757 ++++++++++++++
.../isoSurface/isoSurfaceCell.H | 372 +++
.../isoSurface/isoSurfaceCellTemplates.C | 384 +++
.../isoSurface/isoSurfaceTemplates.C | 784 ++++++
.../isoSurface/sampledIsoSurface.C | 682 ++++++
.../isoSurface/sampledIsoSurface.H | 300 +++
.../isoSurface/sampledIsoSurfaceCell.C | 368 +++
.../isoSurface/sampledIsoSurfaceCell.H | 248 ++
.../sampledIsoSurfaceCellTemplates.C | 89 +
.../isoSurface/sampledIsoSurfaceTemplates.C | 87 +
.../sampledCuttingPlane/sampledCuttingPlane.C | 457 ++++
.../sampledCuttingPlane/sampledCuttingPlane.H | 258 ++
.../sampledCuttingPlaneTemplates.C | 85 +
.../{patch => sampledPatch}/sampledPatch.C | 163 +-
.../{patch => sampledPatch}/sampledPatch.H | 44 +-
.../sampledPatchTemplates.C | 0
.../{plane => sampledPlane}/sampledPlane.C | 174 +-
.../{plane => sampledPlane}/sampledPlane.H | 54 +-
.../sampledPlaneTemplates.C | 0
.../sampledSurface/sampledSurface.C | 19 +-
.../sampledSurface/sampledSurface.H | 70 +-
.../sampledSurface/sampledSurfaceTemplates.C | 2 +-
.../sampledSurfaces/sampledSurfaces.C | 527 ++--
.../sampledSurfaces/sampledSurfaces.H | 102 +-
.../sampledSurfacesTemplates.C | 77 +-
.../sampledTriSurfaceMesh.C | 413 ++++
.../sampledTriSurfaceMesh.H | 236 ++
.../sampledTriSurfaceMeshTemplates.C | 74 +
.../sampledThresholdCellFaces.C | 333 +++
.../sampledThresholdCellFaces.H | 234 ++
.../sampledThresholdCellFacesTemplates.C | 90 +
.../thresholdCellFaces/thresholdCellFaces.C | 288 +++
.../thresholdCellFaces/thresholdCellFaces.H | 123 +
src/sampling/sampledSurface/writers/dx/dx.C | 329 ---
.../writers/dx/dxSurfaceWriter.C | 293 +++
.../foamFile.H => dx/dxSurfaceWriter.H} | 32 +-
.../writers/dx/dxSurfaceWriterRunTime.C} | 7 +-
.../sampledSurface/writers/dx/dxWriters.H | 63 -
.../foamFileSurfaceWriter.C} | 92 +-
.../dx.H => foamFile/foamFileSurfaceWriter.H} | 86 +-
.../foamFile/foamFileSurfaceWriterRunTime.C | 45 +
.../writers/foamFile/foamFileWriters.C | 43 -
.../null/{null.C => nullSurfaceWriter.C} | 15 +-
.../null/{null.H => nullSurfaceWriter.H} | 21 +-
.../writers/null/nullSurfaceWriterRunTime.C} | 8 +-
.../sampledSurface/writers/null/nullWriters.C | 43 -
.../sampledSurface/writers/null/nullWriters.H | 63 -
.../foamFile.C => proxy/proxySurfaceWriter.C} | 64 +-
.../writers/proxy/proxySurfaceWriter.H | 127 +
.../writers/proxy/proxySurfaceWriterRunTime.C | 46 +
.../writers/raw/rawSurfaceWriter.C | 287 ++-
.../writers/raw/rawSurfaceWriter.H | 45 +-
...aceWriters.C => rawSurfaceWriterRunTime.C} | 4 +-
.../writers/raw/rawSurfaceWriters.H | 63 -
.../sampledSurface/writers/stl/stlWriters.H | 63 -
.../sampledSurface/writers/surfaceWriter.C | 69 +-
.../sampledSurface/writers/surfaceWriter.H | 71 +-
.../sampledSurface/writers/surfaceWriters.C | 22 +-
.../sampledSurface/writers/surfaceWriters.H | 38 +-
src/sampling/sampledSurface/writers/vtk/vtk.C | 334 ---
.../writers/vtk/vtkSurfaceWriter.C | 311 +++
.../{stl/stl.H => vtk/vtkSurfaceWriter.H} | 40 +-
.../writers/vtk/vtkSurfaceWriterRunTime.C} | 8 +-
.../sampledSurface/writers/vtk/vtkWriters.H | 63 -
src/surfMesh/Make/files | 49 +
src/surfMesh/Make/options | 0
src/surfMesh/MeshedSurface/MeshedSurface.C | 1197 +++++++++
src/surfMesh/MeshedSurface/MeshedSurface.H | 483 ++++
.../MeshedSurface/MeshedSurfaceCore.C | 78 +
src/surfMesh/MeshedSurface/MeshedSurfaceIO.C | 68 +
src/surfMesh/MeshedSurface/MeshedSurfaceNew.C | 89 +
.../MeshedSurface/MeshedSurfaceZones.C | 203 ++
src/surfMesh/MeshedSurface/MeshedSurfaces.C | 49 +
src/surfMesh/MeshedSurface/MeshedSurfaces.H | 35 +
.../MeshedSurface/MeshedSurfacesFwd.H | 53 +
.../MeshedSurfaceIOAllocator.C | 143 ++
.../MeshedSurfaceIOAllocator.H | 195 ++
.../MeshedSurfaceProxy/MeshedSurfaceProxy.C | 244 ++
.../MeshedSurfaceProxy/MeshedSurfaceProxy.H | 193 ++
.../MeshedSurfaceProxyCore.C | 49 +
.../UnsortedMeshedSurface.C | 773 ++++++
.../UnsortedMeshedSurface.H | 391 +++
.../UnsortedMeshedSurfaceNew.C | 93 +
.../UnsortedMeshedSurfaces.C | 49 +
.../UnsortedMeshedSurfaces.H | 35 +
.../UnsortedMeshedSurfacesFwd.H | 54 +
.../surfFields/surfFields/surfFields.C | 58 +
.../surfFields/surfFields/surfFields.H | 47 +
.../surfFields/surfFields/surfFieldsFwd.H} | 29 +-
.../surfFields/surfFields/surfGeoMesh.H | 90 +
.../surfPointFields/surfPointFields.C | 58 +
.../surfPointFields/surfPointFields.H | 47 +
.../surfPointFields/surfPointFieldsFwd.H} | 32 +-
.../surfPointFields/surfPointGeoMesh.H | 90 +
src/surfMesh/surfMesh/surfMesh.C | 449 ++++
src/surfMesh/surfMesh/surfMesh.H | 305 +++
src/surfMesh/surfMesh/surfMeshClear.C | 84 +
src/surfMesh/surfMesh/surfMeshIO.C | 206 ++
src/surfMesh/surfZone/surfZone/surfZone.C | 164 ++
src/surfMesh/surfZone/surfZone/surfZone.H | 187 ++
.../surfZone/surfZone/surfZoneIOList.C | 156 ++
.../surfZone/surfZone/surfZoneIOList.H | 112 +
.../surfZone/surfZone/surfZoneList.H} | 22 +-
.../surfZoneIdentifier/surfZoneIdentifier.C | 139 ++
.../surfZoneIdentifier/surfZoneIdentifier.H | 174 ++
.../surfZoneIdentifierList.H | 55 +
.../surfaceFormats/ac3d/AC3DsurfaceFormat.C | 461 ++++
.../surfaceFormats/ac3d/AC3DsurfaceFormat.H} | 133 +-
.../ac3d/AC3DsurfaceFormatCore.C | 158 ++
.../ac3d/AC3DsurfaceFormatCore.H | 100 +
.../ac3d/AC3DsurfaceFormatCoreTemplates.C | 43 +
.../ac3d/AC3DsurfaceFormatRunTime.C | 101 +
.../surfaceFormats/ftr/FTRsurfaceFormat.C | 103 +
.../surfaceFormats/ftr/FTRsurfaceFormat.H | 143 ++
.../ftr/FTRsurfaceFormatRunTime.C | 60 +
.../surfaceFormats/gts/GTSsurfaceFormat.C | 445 ++++
.../surfaceFormats/gts/GTSsurfaceFormat.H | 129 +
.../gts/GTSsurfaceFormatRunTime.C | 100 +
.../surfaceFormats/nas/NASsurfaceFormat.C | 392 +++
.../surfaceFormats/nas/NASsurfaceFormat.H | 126 +
.../nas/NASsurfaceFormatCore.C} | 41 +-
.../surfaceFormats/nas/NASsurfaceFormatCore.H | 73 +
.../nas/NASsurfaceFormatRunTime.C | 78 +
.../surfaceFormats/obj/OBJsurfaceFormat.C | 321 +++
.../surfaceFormats/obj/OBJsurfaceFormat.H} | 100 +-
.../obj/OBJsurfaceFormatRunTime.C | 80 +
.../surfaceFormats/off/OFFsurfaceFormat.C | 251 ++
.../surfaceFormats/off/OFFsurfaceFormat.H | 135 ++
.../off/OFFsurfaceFormatRunTime.C | 81 +
.../surfaceFormats/ofs/OFSsurfaceFormat.C | 259 ++
.../surfaceFormats/ofs/OFSsurfaceFormat.H | 157 ++
.../surfaceFormats/ofs/OFSsurfaceFormatCore.C | 72 +
.../surfaceFormats/ofs/OFSsurfaceFormatCore.H | 80 +
.../ofs/OFSsurfaceFormatRunTime.C | 82 +
.../surfaceFormats/smesh/SMESHsurfaceFormat.C | 140 ++
.../surfaceFormats/smesh/SMESHsurfaceFormat.H | 116 +
.../smesh/SMESHsurfaceFormatRunTime.C | 62 +
.../starcd/STARCDsurfaceFormat.C | 280 +++
.../starcd/STARCDsurfaceFormat.H | 149 ++
.../starcd/STARCDsurfaceFormatCore.C | 196 ++
.../starcd/STARCDsurfaceFormatCore.H | 88 +
.../starcd/STARCDsurfaceFormatRunTime.C | 81 +
src/surfMesh/surfaceFormats/stl/STLpoint.H | 101 +
.../surfaceFormats/stl/STLsurfaceFormat.C | 485 ++++
.../surfaceFormats/stl/STLsurfaceFormat.H | 180 ++
.../stl/STLsurfaceFormatASCII.L | 428 ++++
.../surfaceFormats/stl/STLsurfaceFormatCore.C | 279 +++
.../surfaceFormats/stl/STLsurfaceFormatCore.H | 171 ++
.../stl/STLsurfaceFormatRunTime.C | 159 ++
.../surfaceFormats/stl/STLtriangle.H} | 108 +-
.../surfaceFormats/stl/STLtriangleI.H | 116 +
.../surfaceFormats/surfaceFormatsCore.C | 201 ++
.../surfaceFormats/surfaceFormatsCore.H | 135 ++
.../surfaceFormats/tri/TRIsurfaceFormat.C | 237 ++
.../surfaceFormats/tri/TRIsurfaceFormat.H | 141 ++
.../surfaceFormats/tri/TRIsurfaceFormatCore.C | 186 ++
.../surfaceFormats/tri/TRIsurfaceFormatCore.H | 145 ++
.../tri/TRIsurfaceFormatRunTime.C | 100 +
.../surfaceFormats/vtk/VTKsurfaceFormat.C | 176 ++
.../surfaceFormats/vtk/VTKsurfaceFormat.H | 128 +
.../surfaceFormats/vtk/VTKsurfaceFormatCore.C | 128 +
.../surfaceFormats/vtk/VTKsurfaceFormatCore.H | 84 +
.../vtk/VTKsurfaceFormatRunTime.C | 83 +
.../surfaceFormats/wrl/WRLsurfaceFormat.C | 144 ++
.../surfaceFormats/wrl/WRLsurfaceFormat.H | 113 +
.../surfaceFormats/wrl/WRLsurfaceFormatCore.C | 74 +
.../surfaceFormats/wrl/WRLsurfaceFormatCore.H | 84 +
.../wrl/WRLsurfaceFormatRunTime.C | 62 +
.../surfaceFormats/x3d/X3DsurfaceFormat.C | 147 ++
.../surfaceFormats/x3d/X3DsurfaceFormat.H | 112 +
.../surfaceFormats/x3d/X3DsurfaceFormatCore.C | 66 +
.../surfaceFormats/x3d/X3DsurfaceFormatCore.H | 77 +
.../x3d/X3DsurfaceFormatRunTime.C | 61 +
.../surfaceRegistry/surfaceRegistry.C | 66 +
.../surfaceRegistry/surfaceRegistry.H | 96 +
.../Chung/Chung.C | 22 +-
.../Chung/Chung.H | 3 +-
.../Wallis/Wallis.C | 27 +-
.../Wallis/Wallis.H | 3 +-
.../barotropicCompressibilityModel.C | 7 +-
.../barotropicCompressibilityModel.H | 11 +-
.../newBarotropicCompressibilityModel.C | 5 +-
.../linear/linear.C | 22 +-
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.../ODEChemistryModel.C} | 506 ++--
.../ODEChemistryModel/ODEChemistryModel.H | 232 ++
.../ODEChemistryModel/ODEChemistryModelI.H | 114 +
.../basicChemistryModel/basicChemistryModel.C | 69 +
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.../basicChemistryModelI.H | 53 +
.../basicChemistryModel/makeChemistryModel.H | 72 +
.../chemistryModel/chemistryModel.H | 284 ---
.../psiChemistryModel/newPsiChemistryModel.C | 111 +
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.../rhoChemistryModel/rhoChemistryModelI.H | 41 +
.../rhoChemistryModel/rhoChemistryModels.C | 57 +
src/thermophysicalModels/liquids/Ar/Ar.C | 112 +-
src/thermophysicalModels/liquids/Ar/Ar.H | 137 +-
src/thermophysicalModels/liquids/Ar/ArI.H | 111 +
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2072 files changed, 122654 insertions(+), 35119 deletions(-)
create mode 100644 doc/Doxygen/Macros/tensorOperator.sty
create mode 100644 doc/Guides-usletter/ProgrammersGuide.pdf
create mode 100644 doc/Guides-usletter/UserGuide.pdf
rename src/OSspecific/{Unix => POSIX}/Make/files (88%)
create mode 100644 src/OSspecific/POSIX/Make/options
rename src/OSspecific/{Unix/Unix.C => POSIX/POSIX.C} (81%)
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rename src/OSspecific/{Unix => POSIX}/clockTime/clockTime.C (100%)
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create mode 100644 src/thermophysicalModels/radiation/radiationModel/fvDOM/interpolationLookUpTable/interpolationLookUpTable.H
create mode 100644 src/thermophysicalModels/radiation/radiationModel/fvDOM/interpolationLookUpTable/interpolationLookUpTableI.H
create mode 100644 src/thermophysicalModels/radiation/radiationModel/fvDOM/radiativeIntensityRay/radiativeIntensityRay.C
create mode 100644 src/thermophysicalModels/radiation/radiationModel/fvDOM/radiativeIntensityRay/radiativeIntensityRay.H
create mode 100644 src/thermophysicalModels/radiation/radiationModel/fvDOM/radiativeIntensityRay/radiativeIntensityRayI.H
create mode 100644 src/thermophysicalModels/radiation/submodels/absorptionEmissionModel/greyMeanAbsorptionEmission/greyMeanAbsorptionEmission.C
create mode 100644 src/thermophysicalModels/radiation/submodels/absorptionEmissionModel/greyMeanAbsorptionEmission/greyMeanAbsorptionEmission.H
create mode 100644 src/thermophysicalModels/radiation/submodels/absorptionEmissionModel/wideBandAbsorptionEmission/wideBandAbsorptionEmission.C
create mode 100644 src/thermophysicalModels/radiation/submodels/absorptionEmissionModel/wideBandAbsorptionEmission/wideBandAbsorptionEmission.H
rename src/{OpenFOAM/coordinateSystems/cartesianCS.C => thermophysicalModels/solids/C/C.C} (65%)
create mode 100644 src/thermophysicalModels/solids/C/C.H
create mode 100644 src/thermophysicalModels/solids/CaCO3/CaCO3.C
rename src/thermophysicalModels/solids/{Cs/Cs.H => CaCO3/CaCO3.H} (73%)
delete mode 100644 src/thermophysicalModels/solids/Cs/Cs.C
create mode 100644 src/thermophysicalModels/solids/solid/solidI.H
rename src/{OpenFOAM/db/IOstreams/IOstreams/versionNumber.C => thermophysicalModels/specie/equationOfState/icoPolynomial/icoPolynomial.C} (73%)
create mode 100644 src/thermophysicalModels/specie/equationOfState/icoPolynomial/icoPolynomial.H
create mode 100644 src/thermophysicalModels/specie/equationOfState/icoPolynomial/icoPolynomialI.H
create mode 100644 src/thermophysicalModels/specie/include/reactionTypes.H
create mode 100644 src/thermophysicalModels/specie/include/thermoPhysicsTypes.H
delete mode 100644 src/thermophysicalModels/specie/reaction/reactions/makeReactionJanaf.H
create mode 100644 src/thermophysicalModels/specie/reaction/reactions/makeReactionThermo.H
rename src/{OpenFOAM/db/Switch/Switch.C => thermophysicalModels/specie/reaction/reactions/makeReactionThermoReactions.C} (56%)
rename src/{finiteVolume/fvMesh/fvMeshCutSurface/edgeCuts/meshEdgeCuts.C => thermophysicalModels/specie/thermo/hPolynomial/hPolynomialThermo.C} (51%)
create mode 100644 src/thermophysicalModels/specie/thermo/hPolynomial/hPolynomialThermo.H
create mode 100644 src/thermophysicalModels/specie/thermo/hPolynomial/hPolynomialThermoI.H
rename src/{OpenFOAM/db/Switch/SwitchIO.C => thermophysicalModels/specie/transport/polynomial/polynomialTransport.C} (65%)
create mode 100644 src/thermophysicalModels/specie/transport/polynomial/polynomialTransport.H
create mode 100644 src/thermophysicalModels/specie/transport/polynomial/polynomialTransportI.H
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delete mode 100644 wmake/rules/linuxIA64I64/mplibLAM
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create mode 100644 wmake/rules/linuxIA64Icc/X
create mode 100644 wmake/rules/linuxIA64Icc/c
create mode 100644 wmake/rules/linuxIA64Icc/c++
create mode 100644 wmake/rules/linuxIA64Icc/c++Debug
create mode 100644 wmake/rules/linuxIA64Icc/c++Opt
create mode 100644 wmake/rules/linuxIA64Icc/c++Prof
create mode 100644 wmake/rules/linuxIA64Icc/cDebug
create mode 100644 wmake/rules/linuxIA64Icc/cOpt
create mode 100644 wmake/rules/linuxIA64Icc/cProf
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create mode 100644 wmake/rules/linuxIA64Icc/mplibOPENMPI
create mode 100644 wmake/rules/linuxIA64Icc/mplibSYSTEMOPENMPI
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create mode 100644 wmake/rules/linuxPPC64Gcc/c
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create mode 100644 wmake/rules/linuxPPC64Gcc/c++Debug
create mode 100644 wmake/rules/linuxPPC64Gcc/c++Opt
create mode 100644 wmake/rules/linuxPPC64Gcc/c++Prof
rename wmake/rules/{decAlphaGcc => linuxPPC64Gcc}/cDebug (100%)
create mode 100644 wmake/rules/linuxPPC64Gcc/cOpt
create mode 100644 wmake/rules/linuxPPC64Gcc/cProf
create mode 100644 wmake/rules/linuxPPC64Gcc/general
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diff --git a/doc/Allwmake b/doc/Allwmake
index 0e4ba76d8..e180b24e0 100755
--- a/doc/Allwmake
+++ b/doc/Allwmake
@@ -1,8 +1,11 @@
#!/bin/sh
+cd ${0%/*} || exit 1 # run from this directory
set -x
chmod a+rX $WM_PROJECT_DIR
chmod a+rX $WM_PROJECT_DIR/doc
chmod -R a+rX Doxygen
-( cd Doxygen && ./Allwmake )
+Doxygen/Allwmake
+
+# ----------------------------------------------------------------- end-of-file
diff --git a/doc/Doxygen/Allwmake b/doc/Doxygen/Allwmake
index f48d320d0..dab44579b 100755
--- a/doc/Doxygen/Allwmake
+++ b/doc/Doxygen/Allwmake
@@ -1,9 +1,12 @@
#!/bin/sh
+cd ${0%/*} || exit 1 # run from this directory
set -x
umask 22
rm -rf html latex man
doxygen
-# fix permissions (NB: '-X' and not '-x'!)
+# fix permissions (NB: '+X' and not '+x'!)
chmod -R a+rX ./
+
+# ----------------------------------------------------------------- end-of-file
diff --git a/doc/Doxygen/Doxyfile b/doc/Doxygen/Doxyfile
index ecc66763c..908fa543b 100644
--- a/doc/Doxygen/Doxyfile
+++ b/doc/Doxygen/Doxyfile
@@ -788,7 +788,7 @@ TREEVIEW_WIDTH = 250
# configuration options related to the LaTeX output
#---------------------------------------------------------------------------
-# Path for OpenFOAM LaTeX macros
+# Path for OpenCFD LaTeX macros
@INCLUDE_PATH = $(WM_PROJECT_DIR)/doc/Doxygen/Macros/
diff --git a/doc/Doxygen/FoamFooter.html b/doc/Doxygen/FoamFooter.html
index e3bfbb749..352a32682 100644
--- a/doc/Doxygen/FoamFooter.html
+++ b/doc/Doxygen/FoamFooter.html
@@ -1,4 +1,4 @@
-Copyright © 2000-2008 OpenFOAM Foundation
+Copyright © 2000-2009 OpenCFD Ltd
@@ -40,6 +40,26 @@ horizontal-align: left; ">
+
+
+
+
+
diff --git a/doc/Doxygen/Macros/tensorOperator.sty b/doc/Doxygen/Macros/tensorOperator.sty
new file mode 100644
index 000000000..711f17bc2
--- /dev/null
+++ b/doc/Doxygen/Macros/tensorOperator.sty
@@ -0,0 +1,129 @@
+%-----------------------------------------------------------------------------
+% ========= |
+% \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
+% \\ / O peration |
+% \\ / A nd | Copyright held by original author
+% \\/ M anipulation |
+%------------------------------------------------------------------------------
+% License
+% This file is part of OpenFOAM.
+%
+% OpenFOAM is free software; you can redistribute it and/or modify it
+% under the terms of the GNU General Public License as published by the
+% Free Software Foundation; either version 2 of the License, or (at your
+% option) any later version.
+%
+% OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
+% ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
+% FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
+% for more details.
+%
+% You should have received a copy of the GNU General Public License
+% along with OpenFOAM; if not, write to the Free Software Foundation,
+% Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
+%
+% LaTeX Style file
+% tensorOperator.sty
+%
+% Description
+% Standard OpenCFD LaTeX macros for typesetting tensor algebra.
+%
+%------------------------------------------------------------------------------
+
+% tensor style
+% ~~~~~~~~~~~~
+\renewcommand{\vec}[1] {\ensuremath{\mathbf #1}}
+\newcommand{\gvec}[1] {\ensuremath{\mbox{\boldmath$\bf#1$}}}
+
+% products
+% ~~~~~~~~
+\newcommand{\anyprod}{\star}
+\newcommand{\cprod} {\times}
+\newcommand{\dprod} {\,{\scriptscriptstyle \stackrel{\bullet}{{}}}\,}
+\newcommand{\ddprod} {\,{\scriptscriptstyle \stackrel{\bullet}{\bullet}}\,}
+\newcommand{\tdprod} {\,{\scriptscriptstyle \stackrel{3}{\bullet}}\,}
+\newcommand{\tprod} {\,{\scriptscriptstyle \stackrel{\otimes}{{}}}\,}
+
+% operations
+% ~~~~~~~~~~
+\newcommand{\adj} {\ensuremath{\operatorname{adj}}}
+\newcommand{\cof} {\ensuremath{\operatorname{cof}}}
+\newcommand{\diag} {\ensuremath{\operatorname{diag}}}
+\newcommand{\dev} {\ensuremath{\operatorname{dev}}}
+
+\newcommand{\Hodge} {\ensuremath{\operatorname{\stackrel{\displaystyle \ast}{}}}}
+\newcommand{\hyd} {\ensuremath{\operatorname{hyd}}}
+\renewcommand{\max} {\ensuremath{\operatorname{max}}}
+\renewcommand{\min} {\ensuremath{\operatorname{min}}}
+\newcommand{\inv} {\ensuremath{\operatorname{inv}}}
+\newcommand{\sym} {\ensuremath{\operatorname{symm}}} % symm ?
+\newcommand{\skw} {\ensuremath{\operatorname{skew}}} % skew already defined
+\newcommand{\tr} {\ensuremath{\operatorname{tr}}}
+\newcommand{\trans}[1] {\ensuremath{#1^{\operatorname{T}}}}
+
+% alternative tensor operators for hypersonics etc.
+% ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+\newcommand{\devs}[1] {\overset{\scriptscriptstyle\circ}{#1}}
+%\newcommand{\trans}[1] {\ensuremath{#1^{\operatorname{T}}}}
+\newcommand{\symms}[1] {\overleftrightarrow{#1}}
+\newlength{\skewslength}
+\newlength{\skewsheight}
+\newcommand{\skews}[1]{
+ \settowidth{\skewslength}{#1}%
+ \settoheight{\skewsheight}{#1}%
+ \addtolength{\skewsheight}{0.4mm}%
+ {\overleftrightarrow{#1}\hspace{-.5\skewslength}%
+ \rule[\skewsheight]{.4pt}{1.4mm}
+ \hspace{.5\skewslength}%
+}}
+%\newcommand{\skew}[1] {\ensuremath{#1^{\operatorname{A}}}}
+
+% spatial derivatives
+% ~~~~~~~~~~~~~~~~~~~
+\newcommand{\curl}{\ensuremath{\nabla\cprod}}
+\renewcommand{\div} {\ensuremath{\nabla\dprod}}
+\newcommand{\grad}{\ensuremath{\nabla}}
+\newcommand{\laplacian}{\ensuremath{\nabla^{2}}}
+
+% temporal derivatives
+% ~~~~~~~~~~~~~~~~~~~~
+\newcommand{\ddt}[1] {\ensuremath{\frac{\partial #1}{\partial t }}}
+\newcommand{\DDt}[1] {\ensuremath{\frac{D #1}{D t}}}
+\newcommand{\DpDt}[2] {\ensuremath{\frac{d_{#1} #2}{d t }}}
+\newcommand{\dsdts}[1] {\ensuremath{\frac{\partial ^2 #1}{\partial t^2}}}
+\newcommand{\rate}[1] {\ensuremath{\dot{#1}}}
+
+\newcommand{\genDer}{\mathcal{L}}
+
+% time average symbols
+% ~~~~~~~~~~~~~~~~~~~~
+\newcommand{\av}[1] {\ensuremath{\overline{#1}}}
+\newcommand{\corrtwo}[2] {{\dwea{\dprime{#1} \dprime{#2}}}}
+\newcommand{\curly}[1] {{\cal #1}}
+\newcommand{\dprime}[1] {\ensuremath{{#1}^{^{\prime \prime}}}}
+\newcommand{\dwea}[1] {\ensuremath{\widetilde{#1}}}
+\newcommand{\dweafluc}[1] {\ensuremath{\dprime{#1}}}
+\newcommand{\fluc}[1] {\ensuremath{#1^{\prime}}}
+
+% index style
+% ~~~~~~~~~~~
+\newcommand{\veci}[2][i] {\ensuremath{#2_{#1}}}
+\newcommand{\teni}[2][ij] {\ensuremath{#2_{#1}}}
+\newcommand{\tenTi}[2][ji] {\ensuremath{#2_{#1}}}
+
+% index operations
+% ~~~~~~~~~~~~~~~~
+\newcommand{\deltai}[1] {\ensuremath{\partial_{#1}}}
+
+% Sub-subscripts
+% ~~~~~~~~~~~~~~
+\newcommand{\eff} {{\scriptscriptstyle e\!f\!\!f\!}}
+
+% unknown use
+% ~~~~~~~~~~~
+%\font\bigtenrm=cmr12 scaled 1200
+%\newcommand{\eexp}[1]{{\hbox{$\textfont1=\bigtenrm e$}}^{\raise3pt
+%\hbox{$#1$}}}
+
+
+% ------------------------------------------------------------------------------
diff --git a/doc/Guides-a4/ProgrammersGuide.pdf b/doc/Guides-a4/ProgrammersGuide.pdf
index 1484f7423c69caae2c7f5a2a4fdca78bc5756ac1..54fe181d4481f180cccab6d26ef012b6d9e21317 100644
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