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foam-extend4.1-coherent-io/bin/mpirunDebug

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#!/bin/bash
#------------------------------------------------------------------------------
# ========= |
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# \\ / F ield | foam-extend: Open Source CFD
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# \\ / O peration |
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# \\ / A nd | For copyright notice see file Copyright
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# \\/ M anipulation |
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#------------------------------------------------------------------------------
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# License
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# This file is part of foam-extend.
#
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# foam-extend is free software: you can redistribute it and/or modify it
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# under the terms of the GNU General Public License as published by the
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# Free Software Foundation, either version 3 of the License, or (at your
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# option) any later version.
#
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# foam-extend is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
# General Public License for more details.
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#
# You should have received a copy of the GNU General Public License
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# along with foam-extend. If not, see <http://www.gnu.org/licenses/>.
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#
# Script
# mpirunDebug
#
# Description
# Driver script to run mpi jobs with the processes in separate
# windows or to separate log files.
# Requires bash on all processors.
#------------------------------------------------------------------------------
if [ `uname -s` = Linux ]
then
ECHO='echo -e'
else
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ECHO='echo'
fi
printUsage() {
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echo ""
echo "Usage: ${0##*/} -np <dd> <executable> <args>"
echo ""
echo "This will run like mpirun but with each process in an xterm"
}
nProcs=''
exec=''
args=''
while [ "$1" != "" ]; do
echo "$1"
case $1 in
-np)
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nProcs=$2
shift
;;
*)
if [ ! "$exec" ]; then
exec=$1
elif [ ! "$args" ]; then
args="\"$1\""
else
args="$args \"$1\""
fi
;;
esac
shift
done
echo "nProcs=$nProcs"
echo "exec=$exec"
echo "args=$args"
if [ ! "$nProcs" ]; then
printUsage
exit 1
fi
if [ ! "$args" ]; then
printUsage
exit 1
fi
if [ ! "$exec" ]; then
printUsage
exit 1
fi
exec=`which $exec`
if [ ! -x "$exec" ]; then
echo "Cannot find executable $exec or is not executable"
printUsage
exit 1
fi
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if [ ! "$PWD" ]; then
PWD=`pwd`
fi
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echo "run $args" > $PWD/gdbCommands
echo "where" >> $PWD/gdbCommands
echo "Constructed gdb initialization file $PWD/gdbCommands"
$ECHO "Choose running method: 0)normal 1)gdb+xterm 2)gdb 3)log 4)log+xterm 5)xterm+valgrind 6)nemiver: \c"
read method
if [ "$method" -ne 0 -a "$method" -ne 1 -a "$method" -ne 2 -a "$method" -ne 3 -a "$method" -ne 4 -a "$method" -ne 5 -a "$method" -ne 6 ]; then
printUsage
exit 1
fi
$ECHO "Run all processes local or distributed? 1)local 2)remote: \c"
read spawn
if [ "$spawn" -ne 1 -a "$spawn" -ne 2 ]; then
printUsage
exit 1
fi
# check ~/.$WM_PROJECT/$WM_PROJECT_VERSION/
# check ~/.$WM_PROJECT/
# check <installedProject>/etc/
if [ "$WM_PROJECT" ]; then
for i in \
$HOME/.WM_PROJECT/$WM_PROJECT_VERSION \
$HOME/.WM_PROJECT \
$WM_PROJECT_DIR/etc \
;
do
if [ -f "$i/bashrc" ]; then
sourceFoam="$i/bashrc"
break
fi
done
fi
# Construct test string for remote execution.
# Source OpenFOAM settings if OpenFOAM environment not set.
# attempt to preserve the installation directory 'FOAM_INST_DIR'
if [ "$FOAM_INST_DIR" ]; then
sourceFoam='[ "$WM_PROJECT" ] || '"FOAM_INST_DIR=$FOAM_INST_DIR . $sourceFoam"
else
sourceFoam='[ "$WM_PROJECT" ] || '". $sourceFoam"
fi
echo "**sourceFoam:$sourceFoam"
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rm -f $PWD/mpirun.schema
touch $PWD/mpirun.schema
proc=0
xpos=0
ypos=0
for ((proc=0; proc<$nProcs; proc++))
do
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procCmdFile="$PWD/processor${proc}.sh"
procLog="processor${proc}.log"
geom="-geometry 120x20+$xpos+$ypos"
node=""
if [ .$WM_MPLIB = .OPENMPI ]; then
node="-np 1 "
fi
echo "#!/bin/sh" > $procCmdFile
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if [ "$method" -eq 0 ]; then
echo "$sourceFoam; cd $PWD; $exec $args | tee $procLog" >> $procCmdFile
echo "${node}$procCmdFile" >> $PWD/mpirun.schema
elif [ "$method" -eq 1 ]; then
echo "$sourceFoam; cd $PWD; gdb -command $PWD/gdbCommands $exec 2>&1 | tee $procLog; read dummy" >> $procCmdFile
#echo "$sourceFoam; cd $PWD; $exec $args; read dummy" >> $procCmdFile
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echo "${node}xterm -font fixed -title 'processor'$proc $geom -e $procCmdFile" >> $PWD/mpirun.schema
elif [ "$method" -eq 2 ]; then
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echo "$sourceFoam; cd $PWD; gdb -command $PWD/gdbCommands >& $procLog" >> $procCmdFile
echo "${node}$procCmdFile" >> $PWD/mpirun.schema
elif [ "$method" -eq 3 ]; then
echo "$sourceFoam; cd $PWD; $exec $args >& $procLog" >> $procCmdFile
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echo "${node}$procCmdFile" >> $PWD/mpirun.schema
elif [ "$method" -eq 4 ]; then
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echo "$sourceFoam; cd $PWD; $exec $args 2>&1 | tee $procLog; read dummy" >> $procCmdFile
echo "${node}xterm -font fixed -title 'processor'$proc $geom -e $procCmdFile" >> $PWD/mpirun.schema
elif [ "$method" -eq 5 ]; then
echo "$sourceFoam; cd $PWD; valgrind --tool=memcheck --leak-check=full $exec $args | tee $procLog; read dummy" >> $procCmdFile
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echo "${node}xterm -font fixed -title 'processor'$proc $geom -e $procCmdFile" >> $PWD/mpirun.schema
elif [ "$method" -eq 6 ]; then
## maybe one could use nemiver sessions for reloading breakpoints --session=<N> or --last
# echo "$sourceFoam; cd $PWD; nemiver --last $exec $args; read dummy" >> $procCmdFile
echo "$sourceFoam; cd $PWD; nemiver $exec $args; read dummy" >> $procCmdFile
# echo "$sourceFoam; cd $PWD; ddd --args $exec $args; read dummy" >> $procCmdFile
echo "${node} $procCmdFile" >> $PWD/mpirun.schema
fi
chmod +x $procCmdFile
let column=proc%6
if [ $proc -ne 0 -a $column -eq 0 ]; then
((xpos+=600))
((ypos=0))
else
((ypos+=200))
fi
done
for ((proc=0; proc<$nProcs; proc++))
do
procLog="processor${proc}.log"
echo " tail -f $procLog"
done
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cmd=""
if [ .$WM_MPLIB = .OPENMPI ]; then
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cmd="mpirun -app $PWD/mpirun.schema </dev/null"
elif [ .$WM_MPLIB = .MPICH ]; then
cmd="mpiexec"
for ((proc=0; proc<$nProcs; proc++))
do
read procCmd
procXtermCmdFile="$PWD/processor${proc}Xterm.sh"
echo "#!/bin/sh" > $procXtermCmdFile
echo "$procCmd" >> $procXtermCmdFile
chmod +x $procXtermCmdFile
if [ $proc -ne 0 ]; then
cmd="${cmd} :"
fi
cmd="${cmd} -n 1 ${procXtermCmdFile}"
done < $PWD/mpirun.schema
fi
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echo "Constructed $PWD/mpirun.schema file."
echo ""
echo " $cmd"
echo ""
$ECHO "Press return to execute.\c"
read dummy
exec $cmd
#------------------------------------------------------------------------------